Click here to switch to the map view.

The map label for this gene is ymdC [H]

Identifier: 66767734

GI number: 66767734

Start: 1697847

End: 1699409

Strand: Direct

Name: ymdC [H]

Synonym: XC_1408

Alternate gene names: 66767734

Gene position: 1697847-1699409 (Clockwise)

Preceding gene: 66767732

Following gene: 66767745

Centisome position: 32.98

GC content: 65.71

Gene sequence:

>1563_bases
GTGACCAAACGCAAGATCTTCAAGTGGGCGGGCATCGGCGTGCTGGTGCTGGCGCTGGGCAGCGTGCTGTCGCTGTATGG
CTACGGCCGCTTTGCCGATCGCGAGCGCGGCCCTGCCAGCCATGCCTTGCCGGTGGCGGCGCAGGCAACGCCAATCGACC
AGGTCGTCGCTCCGTTGCAGCAGGCGCATGCCGGCAAGACCGGCATGGTGATCCTGTCCGACAACATCGATGCGTTTGCG
GTGCGCGCGTTGACCGCGCGTGCGGCCGGCCGCAGCCTGGATCTGCAGTACTACATCTGGCATGCCGACTTCACCGGCAA
CCTGTTGCACAACGAATTGCTGCGTGCGGCCGACCGTGGCGTGCGCGTGCGCCTGTTGCTGGACGACATGAACATCCATG
GCAGCGACTCGGTGCTGGCCGCGTTGGACAGCCATCCGCTGATCGAGATCCGCCTGTTCAACCCCACCCGTGCACGCGAG
GGCACGCTGATGCGCGGCGTGGAAATGGTGCTGCGCATGTTCAGCATCAACCGACGCATGCACAACAAGGCGTGGATTGC
CGATGGCCGCATCGCGGTGGTGGGTGGGCGCAATGTGGGCGACGAATATTTCGACGCCGCGCGCGACACCAACTTCATGG
ACATGGACGCGGCCTTGATCGGCCCGACGGTGCGTCAGTCCGAACAGGTGTTCGATGCCTACTGGAACAGCCCCAATGCA
TTGCCGCTGGCGGCGCTGGTCACCGCCAAGCCGCAGGCGCTGGAGCAACTGCGCGGCAGCCTGGACGCCGGGATGGCGTC
GGTGGGCGCGCACCCGTACGTGGAGCGCCTGCGCCAATCGCCAAGCGTGCATGCCTTGATGCAGGGCAATCGCCCGGTGC
ATTGGGTGCAGCAGGCGCGCATCGTGGCCGACCCGCCGGAGAAGGCCGAAGGTGCGCCACCGCAACCGGACTGGATGACG
CCGATCCTGATCGGCGAGATGGCCAACGCACGCCGCGAACTGAAATTGATCTCACCTTATTTCGTGCCCGGCGACGACGG
CATGCGCTGGATCGGTGGCCTGCGCAAGCGCGATGTACGCGTCAGCGTATTGACCAATTCACTGGCCGCCAACGATGTCG
TGGCCGTGCACAGCGGCTATGCGGACTACCGCATTCCGCTGCTGCAACAAGGCGTGCGCCTGCACGAGCTCAAGCCGATG
GGGCGCCCGGATGGCAGCCTGTTCGGTTCCAGTGGTGCGAGCCTGCATACCAAGGCCTTCGTGGTGGACGACAGCGCCGG
TTTCATCGGTTCGTTCAACCTGGACCCGCGGGCGATGAATCTCAACACCGAGATGGGCCTGCTATTCGAAGACCGCACCG
TGACCGCGGAGCTGGAGCGGCTATACAACCACAAGGTGAGCGCGCCGGTGAGCTACCGGGTGACGTTGGAGCAGGGCGGA
TTGCGCTGGCACGACGATGCCGCGCAGCCACCGGCGGTGTGGACGCGCGAACCGGCCGCCAGTGTGTGGCGTCGCGGCGC
GGCCAAGGTGTTGGGCTGGTTGCCGCTGGATTCGCAGTTGTAA

Upstream 100 bases:

>100_bases
CGTAGACACTCAAGACCCTCGTTGCGCGTAGCGCCCTGGGCGTATCATGCGTTGTTCAGAGGTTCCCTAGACTGCCGCGC
ACTTCAACGCGGAACCGGCA

Downstream 100 bases:

>100_bases
CTACGGGGAGAAACAGCTGGCGTAGCAGTGGGGGCAGGACTGCGTGCACTTTGCTGCGTGCCTGTTGGGCATTTACGACG
TCGTACTGTCTTGCGCGTGG

Product: cardiolipin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MTKRKIFKWAGIGVLVLALGSVLSLYGYGRFADRERGPASHALPVAAQATPIDQVVAPLQQAHAGKTGMVILSDNIDAFA
VRALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRGVRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRARE
GTLMRGVEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALIGPTVRQSEQVFDAYWNSPNA
LPLAALVTAKPQALEQLRGSLDAGMASVGAHPYVERLRQSPSVHALMQGNRPVHWVQQARIVADPPEKAEGAPPQPDWMT
PILIGEMANARRELKLISPYFVPGDDGMRWIGGLRKRDVRVSVLTNSLAANDVVAVHSGYADYRIPLLQQGVRLHELKPM
GRPDGSLFGSSGASLHTKAFVVDDSAGFIGSFNLDPRAMNLNTEMGLLFEDRTVTAELERLYNHKVSAPVSYRVTLEQGG
LRWHDDAAQPPAVWTREPAASVWRRGAAKVLGWLPLDSQL

Sequences:

>Translated_520_residues
MTKRKIFKWAGIGVLVLALGSVLSLYGYGRFADRERGPASHALPVAAQATPIDQVVAPLQQAHAGKTGMVILSDNIDAFA
VRALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRGVRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRARE
GTLMRGVEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALIGPTVRQSEQVFDAYWNSPNA
LPLAALVTAKPQALEQLRGSLDAGMASVGAHPYVERLRQSPSVHALMQGNRPVHWVQQARIVADPPEKAEGAPPQPDWMT
PILIGEMANARRELKLISPYFVPGDDGMRWIGGLRKRDVRVSVLTNSLAANDVVAVHSGYADYRIPLLQQGVRLHELKPM
GRPDGSLFGSSGASLHTKAFVVDDSAGFIGSFNLDPRAMNLNTEMGLLFEDRTVTAELERLYNHKVSAPVSYRVTLEQGG
LRWHDDAAQPPAVWTREPAASVWRRGAAKVLGWLPLDSQL
>Mature_519_residues
TKRKIFKWAGIGVLVLALGSVLSLYGYGRFADRERGPASHALPVAAQATPIDQVVAPLQQAHAGKTGMVILSDNIDAFAV
RALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRGVRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRAREG
TLMRGVEMVLRMFSINRRMHNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALIGPTVRQSEQVFDAYWNSPNAL
PLAALVTAKPQALEQLRGSLDAGMASVGAHPYVERLRQSPSVHALMQGNRPVHWVQQARIVADPPEKAEGAPPQPDWMTP
ILIGEMANARRELKLISPYFVPGDDGMRWIGGLRKRDVRVSVLTNSLAANDVVAVHSGYADYRIPLLQQGVRLHELKPMG
RPDGSLFGSSGASLHTKAFVVDDSAGFIGSFNLDPRAMNLNTEMGLLFEDRTVTAELERLYNHKVSAPVSYRVTLEQGGL
RWHDDAAQPPAVWTREPAASVWRRGAAKVLGWLPLDSQL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=469, Percent_Identity=39.2324093816631, Blast_Score=311, Evalue=6e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57166; Mature: 57035

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRKIFKWAGIGVLVLALGSVLSLYGYGRFADRERGPASHALPVAAQATPIDQVVAPLQ
CCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QAHAGKTGMVILSDNIDAFAVRALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRG
HHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCC
VRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRAREGTLMRGVEMVLRMFSINRRM
CEEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
HNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALIGPTVRQSEQVFDAYWNSPNA
CCCEEEECCEEEEEECCCCCHHHHHHHCCCCCEECCHHHHCCCHHHHHHHHHHHCCCCCC
LPLAALVTAKPQALEQLRGSLDAGMASVGAHPYVERLRQSPSVHALMQGNRPVHWVQQAR
CEEEEEECCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCEEEEECCCCCEEHHHHCE
IVADPPEKAEGAPPQPDWMTPILIGEMANARRELKLISPYFVPGDDGMRWIGGLRKRDVR
EECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCEEECCCCCHHHHCCCCCCCEE
VSVLTNSLAANDVVAVHSGYADYRIPLLQQGVRLHELKPMGRPDGSLFGSSGASLHTKAF
EEEEECCCCCCCEEEEECCCCCEECHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEE
VVDDSAGFIGSFNLDPRAMNLNTEMGLLFEDRTVTAELERLYNHKVSAPVSYRVTLEQGG
EEECCCCCEEECCCCCCEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCC
LRWHDDAAQPPAVWTREPAASVWRRGAAKVLGWLPLDSQL
CEECCCCCCCCCCCCCCHHHHHHHCCHHHHEEECCCCCCC
>Mature Secondary Structure 
TKRKIFKWAGIGVLVLALGSVLSLYGYGRFADRERGPASHALPVAAQATPIDQVVAPLQ
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QAHAGKTGMVILSDNIDAFAVRALTARAAGRSLDLQYYIWHADFTGNLLHNELLRAADRG
HHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCC
VRVRLLLDDMNIHGSDSVLAALDSHPLIEIRLFNPTRAREGTLMRGVEMVLRMFSINRRM
CEEEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
HNKAWIADGRIAVVGGRNVGDEYFDAARDTNFMDMDAALIGPTVRQSEQVFDAYWNSPNA
CCCEEEECCEEEEEECCCCCHHHHHHHCCCCCEECCHHHHCCCHHHHHHHHHHHCCCCCC
LPLAALVTAKPQALEQLRGSLDAGMASVGAHPYVERLRQSPSVHALMQGNRPVHWVQQAR
CEEEEEECCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHCCCCEEEEECCCCCEEHHHHCE
IVADPPEKAEGAPPQPDWMTPILIGEMANARRELKLISPYFVPGDDGMRWIGGLRKRDVR
EECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCEEECCCCCHHHHCCCCCCCEE
VSVLTNSLAANDVVAVHSGYADYRIPLLQQGVRLHELKPMGRPDGSLFGSSGASLHTKAF
EEEEECCCCCCCEEEEECCCCCEECHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEE
VVDDSAGFIGSFNLDPRAMNLNTEMGLLFEDRTVTAELERLYNHKVSAPVSYRVTLEQGG
EEECCCCCEEECCCCCCEEECCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEEECCC
LRWHDDAAQPPAVWTREPAASVWRRGAAKVLGWLPLDSQL
CEECCCCCCCCCCCCCCHHHHHHHCCHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]