| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is phlA [H]
Identifier: 66767720
GI number: 66767720
Start: 1682453
End: 1683649
Strand: Reverse
Name: phlA [H]
Synonym: XC_1394
Alternate gene names: 66767720
Gene position: 1683649-1682453 (Counterclockwise)
Preceding gene: 66767721
Following gene: 66767717
Centisome position: 32.7
GC content: 64.75
Gene sequence:
>1197_bases ATGTCCCCGTCAGAATCCACATCCTCCACCGCCGCATCCACTCCGTTCGCAGAGTCGATGCGCGGACAACAACCGCAGCC GCAGGACCGGCAATTTCCGGAGCTGCTGCAAGATCTCTATGCCACTGCCAATCAACGCCGCGAAGGCGGTGCCGAAACCT TTGCGCCGCTGGCCAACGGCTGGTCGCGCATGGACGACAGTGCGCTGCAGCAGGCCGGCATCGATCCGGCACTGCTGCAC GACGCAAAAAGCGGCTTCGATGCCGCGTTCTATCGCAACGATCAAGGCCAGGTGGTACTCGGTTTTTGCGGAACCGACGA AGGCAAGGACTGGAAGCACAACATCGGCCAGGGCCTGGGCTTCGACGATGCGCAATATGCATCGGCAATCCAGCTCGGCA GCCAGGCCAAACACGCCTTCGGCGACCAGGTGGTGATCTCCGGCCATTCGTTGGGCGGTGGTCTGGCATCGGCATCGGCC ATGGTCAACGACATTCCCGCGGTGACGTACAACGCGGCCGGCGTCAACGACCGTACCCTCGAACGCGAGGGCCTGGATGC ATCGGCAGCCAAGCAGTACGCCAGCGAGGAGTTGATTCGCGGCTACCACGTCAAGAACGAAATCCTCACCCATCTGCAGG AAGACAGCATTCCGCTGAAGTGGACGATGCCCAATGCGGCTGGCCACCAGATCGAATTGCCGGAGCCGGACCCGCTGTCG TTCGGGCAGCGGCTGGTACCCGGCATGATGCTCAAGCACCGCCTGGACCTGCACGGGGTGGACTCGGTGATCAAGGCGCA GGACATGCAATCGCCCGACCAGGCACGCGGCGCGTCGCTGCAGCCGGGCAGCCAGCTGTTCAACGATGCCGTGGTGCAAC TGGATGGCCAGCGCGAGCGGCTGGGGCTGCGCGACGACACCGCGTTTCTCAACACTGCCGCCAGCGTGGCTGCGCGGGCA GGCAACGACGGCCTGCAGCGGATCGATCATCTGGTGCCCAACCGCGATGGCGATAGCCTGATCGCGGTGCAGGGCCGCAT GGACGACCCCACCCATCTGCGCAGCCATGTGCAGACGGCGGCCGCGGCCAACGAACCGGCGCAGACCAATGTCGGCCAGC TGCAGCAGCACAACCAGCAGCACGCGCATCCGCAGGCCCAGCAGCAGGACGAGCAGCGCCGGGTGATCCAGCAATAA
Upstream 100 bases:
>100_bases GGTCAGATCGGATGTGCGCGCATGGTTGAGCGCTCACAACATTCCCGTGGAAAGCAGCCGCTAAGCGCGCTTTCCGCACG ACGCACGCAAGGAACCGCGC
Downstream 100 bases:
>100_bases GCTGCTTGGCAAACCGTGCCGCATGCAATCCTCGTCAGGTGGACGCGTGCGGTGCGGGAAGGTCCAGCAAGTGACCATCT GTTTACTGCGGTCAACCAAG
Product: phospholipase A1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSPSESTSSTAASTPFAESMRGQQPQPQDRQFPELLQDLYATANQRREGGAETFAPLANGWSRMDDSALQQAGIDPALLH DAKSGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLGFDDAQYASAIQLGSQAKHAFGDQVVISGHSLGGGLASASA MVNDIPAVTYNAAGVNDRTLEREGLDASAAKQYASEELIRGYHVKNEILTHLQEDSIPLKWTMPNAAGHQIELPEPDPLS FGQRLVPGMMLKHRLDLHGVDSVIKAQDMQSPDQARGASLQPGSQLFNDAVVQLDGQRERLGLRDDTAFLNTAASVAARA GNDGLQRIDHLVPNRDGDSLIAVQGRMDDPTHLRSHVQTAAAANEPAQTNVGQLQQHNQQHAHPQAQQQDEQRRVIQQ
Sequences:
>Translated_398_residues MSPSESTSSTAASTPFAESMRGQQPQPQDRQFPELLQDLYATANQRREGGAETFAPLANGWSRMDDSALQQAGIDPALLH DAKSGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLGFDDAQYASAIQLGSQAKHAFGDQVVISGHSLGGGLASASA MVNDIPAVTYNAAGVNDRTLEREGLDASAAKQYASEELIRGYHVKNEILTHLQEDSIPLKWTMPNAAGHQIELPEPDPLS FGQRLVPGMMLKHRLDLHGVDSVIKAQDMQSPDQARGASLQPGSQLFNDAVVQLDGQRERLGLRDDTAFLNTAASVAARA GNDGLQRIDHLVPNRDGDSLIAVQGRMDDPTHLRSHVQTAAAANEPAQTNVGQLQQHNQQHAHPQAQQQDEQRRVIQQ >Mature_397_residues SPSESTSSTAASTPFAESMRGQQPQPQDRQFPELLQDLYATANQRREGGAETFAPLANGWSRMDDSALQQAGIDPALLHD AKSGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLGFDDAQYASAIQLGSQAKHAFGDQVVISGHSLGGGLASASAM VNDIPAVTYNAAGVNDRTLEREGLDASAAKQYASEELIRGYHVKNEILTHLQEDSIPLKWTMPNAAGHQIELPEPDPLSF GQRLVPGMMLKHRLDLHGVDSVIKAQDMQSPDQARGASLQPGSQLFNDAVVQLDGQRERLGLRDDTAFLNTAASVAARAG NDGLQRIDHLVPNRDGDSLIAVQGRMDDPTHLRSHVQTAAAANEPAQTNVGQLQQHNQQHAHPQAQQQDEQRRVIQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.1.1.32 [H]
Molecular weight: Translated: 43039; Mature: 42908
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSESTSSTAASTPFAESMRGQQPQPQDRQFPELLQDLYATANQRREGGAETFAPLANG CCCCCCCCCHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WSRMDDSALQQAGIDPALLHDAKSGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLG HHHCCHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCC FDDAQYASAIQLGSQAKHAFGDQVVISGHSLGGGLASASAMVNDIPAVTYNAAGVNDRTL CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHH EREGLDASAAKQYASEELIRGYHVKNEILTHLQEDSIPLKWTMPNAAGHQIELPEPDPLS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCHH FGQRLVPGMMLKHRLDLHGVDSVIKAQDMQSPDQARGASLQPGSQLFNDAVVQLDGQRER HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHEEECCCHHH LGLRDDTAFLNTAASVAARAGNDGLQRIDHLVPNRDGDSLIAVQGRMDDPTHLRSHVQTA CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHH AAANEPAQTNVGQLQQHNQQHAHPQAQQQDEQRRVIQQ HHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure SPSESTSSTAASTPFAESMRGQQPQPQDRQFPELLQDLYATANQRREGGAETFAPLANG CCCCCCCCHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WSRMDDSALQQAGIDPALLHDAKSGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLG HHHCCHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCC FDDAQYASAIQLGSQAKHAFGDQVVISGHSLGGGLASASAMVNDIPAVTYNAAGVNDRTL CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHH EREGLDASAAKQYASEELIRGYHVKNEILTHLQEDSIPLKWTMPNAAGHQIELPEPDPLS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCHH FGQRLVPGMMLKHRLDLHGVDSVIKAQDMQSPDQARGASLQPGSQLFNDAVVQLDGQRER HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHEEECCCHHH LGLRDDTAFLNTAASVAARAGNDGLQRIDHLVPNRDGDSLIAVQGRMDDPTHLRSHVQTA CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHH AAANEPAQTNVGQLQQHNQQHAHPQAQQQDEQRRVIQQ HHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3056919; 8316077; 1640837 [H]