| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66767682
Identifier: 66767682
GI number: 66767682
Start: 1639624
End: 1640046
Strand: Reverse
Name: 66767682
Synonym: XC_1355
Alternate gene names: NA
Gene position: 1640046-1639624 (Counterclockwise)
Preceding gene: 66767683
Following gene: 66767681
Centisome position: 31.85
GC content: 64.78
Gene sequence:
>423_bases ATGGCAAAAACCGCCGCTAAGAAGGCTGCCCCCAAGAAGGCAGTGAAAAAGGTCGCCGCCTCCAAGACCGCAAAGCCGGC CAAGGCCGCTAGCAAGACCGCCGCGCCGAAGCCGATCAAGGAAGCCCTGAGCAAGACCGGCCTGGTCGCGCACATCGCCG AAACCACCCAGCTGGCGCCGAAGGACGTCCGCGCCGTGCTGGCGTCGCTGGAAGCCACCGCGCACGCGTCGCTGAGCAAG AAGGGCGTCGGCTCGTTCGTCCTGCCGGGCATGCTGAAGATCACCTCGGTCAACGTGCCGGCCAAGCCGAAGCGCAAGGG CATCAACCCGTTCACCAAGGAAGAGCAGGTGTTTGCTGCCAGGCCTGCGACCTGCAAGCTGAAGGTCCGTGCGATGAAGC GTCTGAAGGACGCCGCGCTGTAA
Upstream 100 bases:
>100_bases CGATTCCCTATTGGCGGCGCGCGGCAGTTGCCCTACATTTCGCGTTGCCGACTGGGTCGGCAGACCCAAACACCACCAAC GAATACGGAACACATAACTC
Downstream 100 bases:
>100_bases TCGCGCTGCATCCGGTTTGATCGAGACGGCCTTAGGGCCGTCTTTTTTTTGCGCGTTTGCCACGTCTTCTCCGCCTCCTG ACAGGCACACCACATCGCAC
Product: histone-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAKTAAKKAAPKKAVKKVAASKTAKPAKAASKTAAPKPIKEALSKTGLVAHIAETTQLAPKDVRAVLASLEATAHASLSK KGVGSFVLPGMLKITSVNVPAKPKRKGINPFTKEEQVFAARPATCKLKVRAMKRLKDAAL
Sequences:
>Translated_140_residues MAKTAAKKAAPKKAVKKVAASKTAKPAKAASKTAAPKPIKEALSKTGLVAHIAETTQLAPKDVRAVLASLEATAHASLSK KGVGSFVLPGMLKITSVNVPAKPKRKGINPFTKEEQVFAARPATCKLKVRAMKRLKDAAL >Mature_139_residues AKTAAKKAAPKKAVKKVAASKTAKPAKAASKTAAPKPIKEALSKTGLVAHIAETTQLAPKDVRAVLASLEATAHASLSKK GVGSFVLPGMLKITSVNVPAKPKRKGINPFTKEEQVFAARPATCKLKVRAMKRLKDAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14589; Mature: 14457
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTAAKKAAPKKAVKKVAASKTAKPAKAASKTAAPKPIKEALSKTGLVAHIAETTQLAP CCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCH KDVRAVLASLEATAHASLSKKGVGSFVLPGMLKITSVNVPAKPKRKGINPFTKEEQVFAA HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHC RPATCKLKVRAMKRLKDAAL CCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AKTAAKKAAPKKAVKKVAASKTAKPAKAASKTAAPKPIKEALSKTGLVAHIAETTQLAP CCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCH KDVRAVLASLEATAHASLSKKGVGSFVLPGMLKITSVNVPAKPKRKGINPFTKEEQVFAA HHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHC RPATCKLKVRAMKRLKDAAL CCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA