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The map label for this gene is 66767495

Identifier: 66767495

GI number: 66767495

Start: 1412687

End: 1414174

Strand: Reverse

Name: 66767495

Synonym: XC_1167

Alternate gene names: NA

Gene position: 1414174-1412687 (Counterclockwise)

Preceding gene: 66767496

Following gene: 66767494

Centisome position: 27.47

GC content: 68.15

Gene sequence:

>1488_bases
ATGACGTCCTTCGCTCGTCGCAGCGTTCTGCTCCTCGCCCTGCTCGCTGCCGGCTCGGCCTGTGCATCGCCCGCAACGCA
GCGCTGCGCCACCGATCCCGCTGTTGGCTTTGGCGAGGCGTTGGTGTGTTACCACGATGCGGTAGAGGCGCAGCCGCTGA
GCTACCGGCGTACTGCCACCAGCACCGTGGCCGGGGTCGAACGCCGCGACTATCTGCTGACCTCGCAGGACTGGTCGCCG
GAAGGCCTGGTCCAGCCGGCCAGCTGGCAGCACGACGTTGCGCTCTATGTGCCGCCCGATGCCCTGCCCACGCGTGCGCT
GCTGATCTCCAGCAATGGCACGCGCCAGCCCGTCGATGGTGGCCCGGCGAAGCCATCCAGTGAACTGGCCCCCGAGGCGA
TCGCGGCCCTGGCGCAGCGCACGCGCACCGTGGTGATCGTGCTGAGCGACCTCCCCAGCCAGGCGCTGACGTATCGCGAT
GACGGCACCGCACGCCGCGAAGACGACAGCGTTGCGCACACCTGGTCGCTGTTTATGAAAGCGCCGGCGCAGCGCAAGAC
CTTGCCGCTGCATGTTCCGATGGCCGCGGCCATCGCGCGCACCATGAGCCTGGCCGAACGCGAACTGGCGCCGCTGCGGA
TTCACCGTTTCATCCTGGCCGGCGCGTCCAAGCGCGGCTGGGCCAGCTGGCATGCGGCCATCGCCGACCAGCGCGTGGAG
GCCGTGGCGCCCTTCGTGATCGACATCCTGAACATGCCGGCCGTGCTCACGCACATGGCCAAGGTCTATGGCGGGAACTG
GCCGGTGGCGTTCAACGCCTACGCCAAGGAAGGCATGACCAACCAGCTCGCCACGCCTGCGTTTGCGCAGCTGGTCCAGA
TCCAGGACCCCCTGCAGTACCTGCACACGCGCTACCGCAAGCGGCTGTCCGTGCCCAAGGACATCGTCAATGCCAGCGGC
GATGACTTCTTCGTGCCAGACAACACGCAGTTCTTCTACGACGCACTGCCCGGCACCAAAGCGCTGCGCGTGGTGCCCAA
TGCATCGCACGGTGGCATCCGCGCATCGGTGGTGGATACGCTGGTGCCGTTCGTCAACCGGCTGCAGCAGCAGCGCCCGC
TGCCCGACCTGCGCGGCAGCCTGCGTGGCGGCGCAACGCCTGCCATCCGGGTGCGTTCCAGCGAGCGCCCGGTGCAGGTG
AAGGTATGGAGCGCGAGCAATCCGCAGGCGCGTGACTTCCGCTTTGCCTGCGGCATCCGTTACACCGCCACGGCGGTGAG
TTGGAAGCGCGGTGCGGTGACGGTTCCTGTGCAGGTTCCTGAGGCCGGCTGGCGCGCCTATTTTGTGGAAGCCACCTACG
CAGACGGTTTTGTCGCCACCAGCCAGACCTATGTGCTCGGCAAGCAGGACTACCCGACCCAGGCGCCGCCCTCGGACAAC
GCCGCCTGCCGGACCTTGCCTGCGGTCGCGCCGCCGCCCGCCACCTGA

Upstream 100 bases:

>100_bases
GGTTCGCAGGGCCGGCCATCGCCGATCAGCGCTGTGACATGCTGGCGCGCCTGCTCACTGCAGACCCGCTAGCCCCGCAT
CCTGCGTCTGGAGACATGCA

Downstream 100 bases:

>100_bases
GCACGCCGGCAGGACTTGGTCGCCACAGCAGGACAGGAATCTGGCCTGGGCATCCCTCATGGCCGCCTCCGACGGTCGCG
ACAGACGCCGGAAGTGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Phopq-Activated Pathogenicity-Related Protein Pqaa Type; Transmembrane Protein; PhoPQ-Activated Pathogenicity-Related Protein; PhoPQ-Activated Pathogenicity-Like Protein PqaA Type; PhoPQ-Activated Pathogenicity-Related Protein PqaA Type; PhoPQ-Regulated Protein; Secreted Protein; PhoPQ-Activated Pathogenicity-Like Protein

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MTSFARRSVLLLALLAAGSACASPATQRCATDPAVGFGEALVCYHDAVEAQPLSYRRTATSTVAGVERRDYLLTSQDWSP
EGLVQPASWQHDVALYVPPDALPTRALLISSNGTRQPVDGGPAKPSSELAPEAIAALAQRTRTVVIVLSDLPSQALTYRD
DGTARREDDSVAHTWSLFMKAPAQRKTLPLHVPMAAAIARTMSLAERELAPLRIHRFILAGASKRGWASWHAAIADQRVE
AVAPFVIDILNMPAVLTHMAKVYGGNWPVAFNAYAKEGMTNQLATPAFAQLVQIQDPLQYLHTRYRKRLSVPKDIVNASG
DDFFVPDNTQFFYDALPGTKALRVVPNASHGGIRASVVDTLVPFVNRLQQQRPLPDLRGSLRGGATPAIRVRSSERPVQV
KVWSASNPQARDFRFACGIRYTATAVSWKRGAVTVPVQVPEAGWRAYFVEATYADGFVATSQTYVLGKQDYPTQAPPSDN
AACRTLPAVAPPPAT

Sequences:

>Translated_495_residues
MTSFARRSVLLLALLAAGSACASPATQRCATDPAVGFGEALVCYHDAVEAQPLSYRRTATSTVAGVERRDYLLTSQDWSP
EGLVQPASWQHDVALYVPPDALPTRALLISSNGTRQPVDGGPAKPSSELAPEAIAALAQRTRTVVIVLSDLPSQALTYRD
DGTARREDDSVAHTWSLFMKAPAQRKTLPLHVPMAAAIARTMSLAERELAPLRIHRFILAGASKRGWASWHAAIADQRVE
AVAPFVIDILNMPAVLTHMAKVYGGNWPVAFNAYAKEGMTNQLATPAFAQLVQIQDPLQYLHTRYRKRLSVPKDIVNASG
DDFFVPDNTQFFYDALPGTKALRVVPNASHGGIRASVVDTLVPFVNRLQQQRPLPDLRGSLRGGATPAIRVRSSERPVQV
KVWSASNPQARDFRFACGIRYTATAVSWKRGAVTVPVQVPEAGWRAYFVEATYADGFVATSQTYVLGKQDYPTQAPPSDN
AACRTLPAVAPPPAT
>Mature_494_residues
TSFARRSVLLLALLAAGSACASPATQRCATDPAVGFGEALVCYHDAVEAQPLSYRRTATSTVAGVERRDYLLTSQDWSPE
GLVQPASWQHDVALYVPPDALPTRALLISSNGTRQPVDGGPAKPSSELAPEAIAALAQRTRTVVIVLSDLPSQALTYRDD
GTARREDDSVAHTWSLFMKAPAQRKTLPLHVPMAAAIARTMSLAERELAPLRIHRFILAGASKRGWASWHAAIADQRVEA
VAPFVIDILNMPAVLTHMAKVYGGNWPVAFNAYAKEGMTNQLATPAFAQLVQIQDPLQYLHTRYRKRLSVPKDIVNASGD
DFFVPDNTQFFYDALPGTKALRVVPNASHGGIRASVVDTLVPFVNRLQQQRPLPDLRGSLRGGATPAIRVRSSERPVQVK
VWSASNPQARDFRFACGIRYTATAVSWKRGAVTVPVQVPEAGWRAYFVEATYADGFVATSQTYVLGKQDYPTQAPPSDNA
ACRTLPAVAPPPAT

Specific function: Unknown

COG id: COG4287

COG function: function code R; PhoPQ-activated pathogenicity-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53671; Mature: 53539

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFARRSVLLLALLAAGSACASPATQRCATDPAVGFGEALVCYHDAVEAQPLSYRRTAT
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHH
STVAGVERRDYLLTSQDWSPEGLVQPASWQHDVALYVPPDALPTRALLISSNGTRQPVDG
HHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC
GPAKPSSELAPEAIAALAQRTRTVVIVLSDLPSQALTYRDDGTARREDDSVAHTWSLFMK
CCCCCCHHCCHHHHHHHHHCCCEEEEEEECCCCHHEEECCCCCCCCCCCCHHHHHHHHHH
APAQRKTLPLHVPMAAAIARTMSLAERELAPLRIHRFILAGASKRGWASWHAAIADQRVE
CCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AVAPFVIDILNMPAVLTHMAKVYGGNWPVAFNAYAKEGMTNQLATPAFAQLVQIQDPLQY
HHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCHHCCCHHHHHHHHHHHHHHH
LHTRYRKRLSVPKDIVNASGDDFFVPDNTQFFYDALPGTKALRVVPNASHGGIRASVVDT
HHHHHHHHCCCCHHHHCCCCCCEECCCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHH
LVPFVNRLQQQRPLPDLRGSLRGGATPAIRVRSSERPVQVKVWSASNPQARDFRFACGIR
HHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCCE
YTATAVSWKRGAVTVPVQVPEAGWRAYFVEATYADGFVATSQTYVLGKQDYPTQAPPSDN
EEEEEEEECCCCEEEEEECCCCCCEEEEEEEEECCCEEECCCEEEECCCCCCCCCCCCCC
AACRTLPAVAPPPAT
CHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSFARRSVLLLALLAAGSACASPATQRCATDPAVGFGEALVCYHDAVEAQPLSYRRTAT
CCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHH
STVAGVERRDYLLTSQDWSPEGLVQPASWQHDVALYVPPDALPTRALLISSNGTRQPVDG
HHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCC
GPAKPSSELAPEAIAALAQRTRTVVIVLSDLPSQALTYRDDGTARREDDSVAHTWSLFMK
CCCCCCHHCCHHHHHHHHHCCCEEEEEEECCCCHHEEECCCCCCCCCCCCHHHHHHHHHH
APAQRKTLPLHVPMAAAIARTMSLAERELAPLRIHRFILAGASKRGWASWHAAIADQRVE
CCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AVAPFVIDILNMPAVLTHMAKVYGGNWPVAFNAYAKEGMTNQLATPAFAQLVQIQDPLQY
HHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCHHCCCHHHHHHHHHHHHHHH
LHTRYRKRLSVPKDIVNASGDDFFVPDNTQFFYDALPGTKALRVVPNASHGGIRASVVDT
HHHHHHHHCCCCHHHHCCCCCCEECCCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHH
LVPFVNRLQQQRPLPDLRGSLRGGATPAIRVRSSERPVQVKVWSASNPQARDFRFACGIR
HHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCCE
YTATAVSWKRGAVTVPVQVPEAGWRAYFVEATYADGFVATSQTYVLGKQDYPTQAPPSDN
EEEEEEEECCCCEEEEEECCCCCCEEEEEEEEECCCEEECCCEEEECCCCCCCCCCCCCC
AACRTLPAVAPPPAT
CHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA