| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is fepA [C]
Identifier: 66767493
GI number: 66767493
Start: 1408567
End: 1411203
Strand: Reverse
Name: fepA [C]
Synonym: XC_1165
Alternate gene names: 66767493
Gene position: 1411203-1408567 (Counterclockwise)
Preceding gene: 66767494
Following gene: 66767491
Centisome position: 27.41
GC content: 63.18
Gene sequence:
>2637_bases ATGAAATACCGCACTTCGCTGCTGTCCAGCGCCATTGGCATGTCGCTGGTGTTCGCCGCCCAGGCACAGCAGACGGCCGA CCCACAGGCCACCGAACTGGATGCCGTGCAGGTGGTTGGCATCCGCGCCAGCCTTGAAAAATCGCTGGACACCAAGCGTA ACAACACCGGCATTTCCGAAGCGATCACCGCCGAGGACATCGGCAAGTTCCCCAGCACCAACGTGGCCGAAGCGCTGTCG CAGATTCCCGGCGTCACCCTGGACCGTCGCTTTGGCCAGGGCGAGCGCGTCAGCATCGACGGCACCGACCCCAGCCTCAA TCTCTCCTTTCTGGACGGCCACCCGGTGGCGCAGGCAATCTGGCTCTACGGCGAACAGCCCAGCCGCGGTTTCGATTACA CCTTGCTGGCACCGCAAATCCTGGGGCGTGCGGAAATCATCAAGTCGTCCGAAGCACGCCTGACCGAAGGCAGCCTGGGT GGCACCGTGCTCATGCACACGCGCCAGCCGCTCGACCTGAAGGCCAACGAGGTGGCCGCCTCCATCGGCTATAGCTACAG CGACCAGGCCAGCCAGGGCAAGCCGAATGCGGCGCTGCTGTACAGCTGGAAAAATCCGGCAGAAACCTTCGGCGTCACCG TCTCCGCGCAGCACTACGAAGAACGCGTGGACCGGCGCGGCATGGAAGTGTTCGGCTATGCGCCAGCCAGCACCTTCGCC AATGCAGCCGGCGGCGTGCCGGCCGATGCGGACGTGCCCAACTCGATCAACGCCGCGTGGTTCCAGCAGGACCGCGAACG CGACAGCGCCGTGGTCAACCTGCAGCTCAAGCCCAGCGATGCGCTGGAGTTCAATCTCAGCGGCTTGTACATCAACGAGA ACTTCGACAACTACAACCAGTCGATGTACAGCTTTCTCACCTGGAATGCAGGCACTGTTGGCGCGGTGGACCAGCTGGGT GGCGTGCGCAATGGCGTGGTCACCAGCGGCCATTCCAGCGCCAACGCCGACCCCTTGGGCGGCACGGTGATCTACGACAA CAACGTGCGCGAATCGGAAGTGACCACCAAAGGGCTGGACCTGCGTGGCGCCCTCCGCGGCGAGGGTTGGGGTCTCAACG GGCAGGTGGGCCAGAGCAAGTCCGAAAACAAGGATCTGTCGCAGTATTTCATCGAGCCGTTCTACAACGGCGGCTTCAGC TGGGATACGCGCCGCGGCATCCGCTTCGATGACCCGGCCGCTGCACGCGACCCGGCCAACTGGGGCTCGGCCGGCGGCTG GTTCGGCAACAACGGCATCTTCTCCACCGAGAGCAAGGACACCTACGGCCAGCTGGATTTCAACCTGCAATTCGATGGCG TGTTCAATCAGCTGCTACTGGGCGTGCGCCACGGCAAACACGACGAGCGCTTTGAGCTCAACGTCTATGGTGGCGTCACG CCGGGCACGCTGGCCGATGTGGGCACGATCGGCCTGACCGACCTGCAAGGTTTCTACCCGGACCACGGGCAGCATGTGCA GGCCGGCCGCGACAATGTGCTCAACTGGATCCGCAACAGCCCGGTGGATTACAGCGCGCCGGATCCGGCCAGCTATCTCA ATAACAGCTGGGCGCTGGAGCAGACCAATAACGCCGCCTACGCACAGGTGAACTTCTCCAGCGGCGGCCTGCGTGGCAAC CTCGGTGTGCGCTATGTGGACTCCAAGACCGAAGGCAGCGGGTTCGTCTATAGCGGCACCCCGTCGTTGGCCAACGCCGA CAGCCTGTGGCAAACGCGCACGCGCAAGGAAGACTTCCTGCTGCCATCGCTCACGCTGTCCTACGACACCAGCGACGACT GGGTGTTCCGCTTTGCCGCGGCCAAGGTGATCGCCTGGGCGCCGTACAACCAGATGGTCAACAACACCTTCCTCAACGAC ACCACACTGACCGGCAGCGGTGGCAACGCGGAGCTATCGCCGTACGAATCGTGGAACTTCAATCTGTCGGCGGAGTATTA CTTCGCGCCGCAGTCGGTGGTGGCCTGGTCGGTGTTCTACAAGAAGATCGACAACTACATCGACACCAGCGTCAGCGTGG AGCGGCAATACAACGCCCTGCGCGACACCGCGCCGCAAAGCTGGGCGCAGCTGATCGGCAGCAACGGCTGCACCGCCGAC GGTTATTGCGACTACAGCATCCAGCGGCCACGCAACGCTGGCGATGGCAAGGTCAAGGGGTTCAACCTTTCTTTCCAGCA GCCGTTCGGCGACAGCGGCTTCGGTCTGACTGCCAATTACACCTATGCCAATGGCGAAAACAACACCGGCGACCCGCTGC CCTACCAGTCGCGCAACAGCGTGGCGTTTTCGCCGTACTACGAAAAAGGCCCGCTCAACGCCCGCCTGACCTACAACTGG CGTGACAGCTACCTGGCCGGCGGTTACGTGGCCGGCGCCGCGCCCGCCAGCGTGGACGACTACGCCGAACTCGGCGCCAG CGTGGGCTATGCGTTCAGCCCGAACTGGTCGCTGCAGATCGACGCGCAAAATCTGCTGGACGAGGAATACCTGCAGTATC TCGGCGACAAGGAGCATCTGGCCGGGCGCTACAAGAGTGGCCGCCGTTACATGGCGACCCTGCACCTGAAGTTTTGA
Upstream 100 bases:
>100_bases CACCACTCGCGTCTCCCGACCGCGAGCGGCGTGTACCCCCAGTGCATCCGGCGAGCGCAGGCCCGCCGTCCATCCCTGTT GCGTGATGAGGAGAGACATC
Downstream 100 bases:
>100_bases CCTACCGCATGCCAGGGCGCCGGGAGCAATGCAGCAGCTCCCGGCGCCGTGGTGTTAGCGGGTCAGTACGACCTGCACGG CGCTGCGGTGTCGAAGCTGC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Subfamily Protein; Nucleoside Diphosphate Kinase; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB-Dependent Receptor Plug Domain; NB Dependent Receptor-Related Protein; 3-Dehydroquinate Synthase; Peptidase; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 878; Mature: 878
Protein sequence:
>878_residues MKYRTSLLSSAIGMSLVFAAQAQQTADPQATELDAVQVVGIRASLEKSLDTKRNNTGISEAITAEDIGKFPSTNVAEALS QIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAIWLYGEQPSRGFDYTLLAPQILGRAEIIKSSEARLTEGSLG GTVLMHTRQPLDLKANEVAASIGYSYSDQASQGKPNAALLYSWKNPAETFGVTVSAQHYEERVDRRGMEVFGYAPASTFA NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSDALEFNLSGLYINENFDNYNQSMYSFLTWNAGTVGAVDQLG GVRNGVVTSGHSSANADPLGGTVIYDNNVRESEVTTKGLDLRGALRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFS WDTRRGIRFDDPAAARDPANWGSAGGWFGNNGIFSTESKDTYGQLDFNLQFDGVFNQLLLGVRHGKHDERFELNVYGGVT PGTLADVGTIGLTDLQGFYPDHGQHVQAGRDNVLNWIRNSPVDYSAPDPASYLNNSWALEQTNNAAYAQVNFSSGGLRGN LGVRYVDSKTEGSGFVYSGTPSLANADSLWQTRTRKEDFLLPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLND TTLTGSGGNAELSPYESWNFNLSAEYYFAPQSVVAWSVFYKKIDNYIDTSVSVERQYNALRDTAPQSWAQLIGSNGCTAD GYCDYSIQRPRNAGDGKVKGFNLSFQQPFGDSGFGLTANYTYANGENNTGDPLPYQSRNSVAFSPYYEKGPLNARLTYNW RDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQIDAQNLLDEEYLQYLGDKEHLAGRYKSGRRYMATLHLKF
Sequences:
>Translated_878_residues MKYRTSLLSSAIGMSLVFAAQAQQTADPQATELDAVQVVGIRASLEKSLDTKRNNTGISEAITAEDIGKFPSTNVAEALS QIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAIWLYGEQPSRGFDYTLLAPQILGRAEIIKSSEARLTEGSLG GTVLMHTRQPLDLKANEVAASIGYSYSDQASQGKPNAALLYSWKNPAETFGVTVSAQHYEERVDRRGMEVFGYAPASTFA NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSDALEFNLSGLYINENFDNYNQSMYSFLTWNAGTVGAVDQLG GVRNGVVTSGHSSANADPLGGTVIYDNNVRESEVTTKGLDLRGALRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFS WDTRRGIRFDDPAAARDPANWGSAGGWFGNNGIFSTESKDTYGQLDFNLQFDGVFNQLLLGVRHGKHDERFELNVYGGVT PGTLADVGTIGLTDLQGFYPDHGQHVQAGRDNVLNWIRNSPVDYSAPDPASYLNNSWALEQTNNAAYAQVNFSSGGLRGN LGVRYVDSKTEGSGFVYSGTPSLANADSLWQTRTRKEDFLLPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLND TTLTGSGGNAELSPYESWNFNLSAEYYFAPQSVVAWSVFYKKIDNYIDTSVSVERQYNALRDTAPQSWAQLIGSNGCTAD GYCDYSIQRPRNAGDGKVKGFNLSFQQPFGDSGFGLTANYTYANGENNTGDPLPYQSRNSVAFSPYYEKGPLNARLTYNW RDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQIDAQNLLDEEYLQYLGDKEHLAGRYKSGRRYMATLHLKF >Mature_878_residues MKYRTSLLSSAIGMSLVFAAQAQQTADPQATELDAVQVVGIRASLEKSLDTKRNNTGISEAITAEDIGKFPSTNVAEALS QIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAIWLYGEQPSRGFDYTLLAPQILGRAEIIKSSEARLTEGSLG GTVLMHTRQPLDLKANEVAASIGYSYSDQASQGKPNAALLYSWKNPAETFGVTVSAQHYEERVDRRGMEVFGYAPASTFA NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSDALEFNLSGLYINENFDNYNQSMYSFLTWNAGTVGAVDQLG GVRNGVVTSGHSSANADPLGGTVIYDNNVRESEVTTKGLDLRGALRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFS WDTRRGIRFDDPAAARDPANWGSAGGWFGNNGIFSTESKDTYGQLDFNLQFDGVFNQLLLGVRHGKHDERFELNVYGGVT PGTLADVGTIGLTDLQGFYPDHGQHVQAGRDNVLNWIRNSPVDYSAPDPASYLNNSWALEQTNNAAYAQVNFSSGGLRGN LGVRYVDSKTEGSGFVYSGTPSLANADSLWQTRTRKEDFLLPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLND TTLTGSGGNAELSPYESWNFNLSAEYYFAPQSVVAWSVFYKKIDNYIDTSVSVERQYNALRDTAPQSWAQLIGSNGCTAD GYCDYSIQRPRNAGDGKVKGFNLSFQQPFGDSGFGLTANYTYANGENNTGDPLPYQSRNSVAFSPYYEKGPLNARLTYNW RDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQIDAQNLLDEEYLQYLGDKEHLAGRYKSGRRYMATLHLKF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95881; Mature: 95881
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRTSLLSSAIGMSLVFAAQAQQTADPQATELDAVQVVGIRASLEKSLDTKRNNTGISE CCHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCHH AITAEDIGKFPSTNVAEALSQIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAI HHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCEEEE WLYGEQPSRGFDYTLLAPQILGRAEIIKSSEARLTEGSLGGTVLMHTRQPLDLKANEVAA EEECCCCCCCCCEEEECHHHHCHHHHHCCCCCEECCCCCCCEEEEECCCCCCCCHHHHHH SIGYSYSDQASQGKPNAALLYSWKNPAETFGVTVSAQHYEERVDRRGMEVFGYAPASTFA HHCCCCCCCCCCCCCCEEEEEECCCCCHHHEEEEEHHHHHHHHHHCCCEEEEECCHHHHH NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSDALEFNLSGLYINENFDNYNQ HCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCHHH SMYSFLTWNAGTVGAVDQLGGVRNGVVTSGHSSANADPLGGTVIYDNNVRESEVTTKGLD HEEHEEEECCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCEECCCC LRGALRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFSWDTRRGIRFDDPAAARDPAN EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC WGSAGGWFGNNGIFSTESKDTYGQLDFNLQFDGVFNQLLLGVRHGKHDERFELNVYGGVT CCCCCCCCCCCCEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCC PGTLADVGTIGLTDLQGFYPDHGQHVQAGRDNVLNWIRNSPVDYSAPDPASYLNNSWALE CCHHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEE QTNNAAYAQVNFSSGGLRGNLGVRYVDSKTEGSGFVYSGTPSLANADSLWQTRTRKEDFL ECCCEEEEEEEECCCCEECCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCEE LPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLNDTTLTGSGGNAELSPYESWNF CCEEEEEECCCCCCEEEEEHHEEEEECCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCE NLSAEYYFAPQSVVAWSVFYKKIDNYIDTSVSVERQYNALRDTAPQSWAQLIGSNGCTAD EEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHHCCCCCCCC GYCDYSIQRPRNAGDGKVKGFNLSFQQPFGDSGFGLTANYTYANGENNTGDPLPYQSRNS CEECCEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC VAFSPYYEKGPLNARLTYNWRDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQI EEECCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHCCEEECCCCEEEE DAQNLLDEEYLQYLGDKEHLAGRYKSGRRYMATLHLKF CHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEC >Mature Secondary Structure MKYRTSLLSSAIGMSLVFAAQAQQTADPQATELDAVQVVGIRASLEKSLDTKRNNTGISE CCHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCHH AITAEDIGKFPSTNVAEALSQIPGVTLDRRFGQGERVSIDGTDPSLNLSFLDGHPVAQAI HHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCEEEE WLYGEQPSRGFDYTLLAPQILGRAEIIKSSEARLTEGSLGGTVLMHTRQPLDLKANEVAA EEECCCCCCCCCEEEECHHHHCHHHHHCCCCCEECCCCCCCEEEEECCCCCCCCHHHHHH SIGYSYSDQASQGKPNAALLYSWKNPAETFGVTVSAQHYEERVDRRGMEVFGYAPASTFA HHCCCCCCCCCCCCCCEEEEEECCCCCHHHEEEEEHHHHHHHHHHCCCEEEEECCHHHHH NAAGGVPADADVPNSINAAWFQQDRERDSAVVNLQLKPSDALEFNLSGLYINENFDNYNQ HCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCHHH SMYSFLTWNAGTVGAVDQLGGVRNGVVTSGHSSANADPLGGTVIYDNNVRESEVTTKGLD HEEHEEEECCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCEECCCC LRGALRGEGWGLNGQVGQSKSENKDLSQYFIEPFYNGGFSWDTRRGIRFDDPAAARDPAN EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC WGSAGGWFGNNGIFSTESKDTYGQLDFNLQFDGVFNQLLLGVRHGKHDERFELNVYGGVT CCCCCCCCCCCCEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCC PGTLADVGTIGLTDLQGFYPDHGQHVQAGRDNVLNWIRNSPVDYSAPDPASYLNNSWALE CCHHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEE QTNNAAYAQVNFSSGGLRGNLGVRYVDSKTEGSGFVYSGTPSLANADSLWQTRTRKEDFL ECCCEEEEEEEECCCCEECCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCEE LPSLTLSYDTSDDWVFRFAAAKVIAWAPYNQMVNNTFLNDTTLTGSGGNAELSPYESWNF CCEEEEEECCCCCCEEEEEHHEEEEECCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCE NLSAEYYFAPQSVVAWSVFYKKIDNYIDTSVSVERQYNALRDTAPQSWAQLIGSNGCTAD EEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHHCCCCCCCC GYCDYSIQRPRNAGDGKVKGFNLSFQQPFGDSGFGLTANYTYANGENNTGDPLPYQSRNS CEECCEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC VAFSPYYEKGPLNARLTYNWRDSYLAGGYVAGAAPASVDDYAELGASVGYAFSPNWSLQI EEECCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHCCEEECCCCEEEE DAQNLLDEEYLQYLGDKEHLAGRYKSGRRYMATLHLKF CHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA