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The map label for this gene is insC1 [C]

Identifier: 66767357

GI number: 66767357

Start: 1243026

End: 1243295

Strand: Reverse

Name: insC1 [C]

Synonym: XC_1026

Alternate gene names: 66767357

Gene position: 1243295-1243026 (Counterclockwise)

Preceding gene: 66767362

Following gene: 77761124

Centisome position: 24.15

GC content: 58.15

Gene sequence:

>270_bases
TTGGACGTGAAGAAACGTTTTACTGACGAGCAGGTCATCGGCTTTCTGCGCGAAGCCGAAAGCGGCGTCGCCATCAAGGA
TCTGTGCCGGCGGCATGGCTTCAGCGAGGCCTCGTACTACCTGTGGCGCAGCAAGTTCGGTGGGATGAGCGTGCCCGATG
CCAAGCGGCTCAAGGACCTCGAGTCCGAGAACGCGCGGCTGAAGAAGTTGCTGGCCGAGCAGTTGTTCGAGAACGACCTG
ATCAAGGATGCACTGCGAAAAAAGTGGTAA

Upstream 100 bases:

>100_bases
ACTGCCCGGTTGCGATGCGATAGCCCAGAATCAGTACCCGACGTCCCCCCAATTTTGAGTAGCGCCTCAGTTTGGAGTCC
AATTCCCTACCCCGAGGAGA

Downstream 100 bases:

>100_bases
GCGCACCGGCGCGTCGTACGCTGGTGCGCGAATGGATCGGGCGTGGTGCCAGCGAGCGTCGTGCGTTGGCAGTGATCGGC
ATGAGCGCCAGTGCACTGCG

Product: IS1404 transposase

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MDVKKRFTDEQVIGFLREAESGVAIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLESENARLKKLLAEQLFENDL
IKDALRKKW

Sequences:

>Translated_89_residues
MDVKKRFTDEQVIGFLREAESGVAIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLESENARLKKLLAEQLFENDL
IKDALRKKW
>Mature_89_residues
MDVKKRFTDEQVIGFLREAESGVAIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLESENARLKKLLAEQLFENDL
IKDALRKKW

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10422; Mature: 10422

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKKRFTDEQVIGFLREAESGVAIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDL
CCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
ESENARLKKLLAEQLFENDLIKDALRKKW
HCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDVKKRFTDEQVIGFLREAESGVAIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDL
CCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
ESENARLKKLLAEQLFENDLIKDALRKKW
HCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]