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The map label for this gene is yfbS [C]

Identifier: 66767345

GI number: 66767345

Start: 1224867

End: 1226729

Strand: Reverse

Name: yfbS [C]

Synonym: XC_1013

Alternate gene names: 66767345

Gene position: 1226729-1224867 (Counterclockwise)

Preceding gene: 66767346

Following gene: 66767343

Centisome position: 23.83

GC content: 64.57

Gene sequence:

>1863_bases
ATGGACACCGCGCTAACGCTGACCAACGACATGAAGCTCGTCCTCGGGCTGGTCGGCTTTACGATGGCGATGTTCCTGTT
CGAGCGCATCCGCGCCGACGTGGTGGCGTTGATCGTGTTGGTGGTGTTGGGCGTCACCGGGCTGGTGGCGCCGGAGGAAC
TGTTTGGCGGCTTCTCCGGTAACGCGGTGATGAGCATCATCGCCACCACCATCCTGGGTGCGGGGCTGGAGCGCACCGGC
GCCTTGAACCGCCTGGCCACCTGGTTGCTGCGGCGTTCGCACGGCAGCGAGCAGAGGCTGATGATGATGACGCTGGGGAT
CTCCGGCCTGAATTCGTCTTTCATGCAGAACCCCTCGGTGATGGCGCTCTACCTGCCGGTCGCCTCGCGGCTGGCCGCAC
GCACCGGGCTCACCTTGCAACGCATGCTGTTGCCGATCGCCGCGGCGATCGTGATGGGCGGTGCGCTCACCATGGTGGGC
AATTCGCCGCTGATCCTGCTCAACGATTTGTTGGTGTCGGCCAACAACAATCTGCCCTCGGGCATGGCCAGCATCGAGCC
GTTGACCATGTTTGCGCCGCTGCCGATCGGCCTGGCGCTGCTGGTTGCCGCTTTGCTGTATTTCCGGTTTTACGGCGACC
GCAAGTTGATCGAGGAAGAGCGCCTGATCAATGAGGGCGTCACGCCTTCGCGCACCGAGAGCTATTTCGCCAAGACCTAC
GGCATCGACGGCGATGTGTTCGAGCTCACCGTCACCGCCGAAAGCCCACTGGTGGGCATGACCCTGGGCGAGGCCGAAGC
CATTCACGATGCGCCGCTGCTGTTGGCGCTGAAGACCGGCAACGACACCCGCCTGGCCCCGCCGGCCGACATGCGCATCT
GGGTCGGCAGCGTGCTGGGTGCGATGGGCAAGCGCCAGGACGTGACCGACTTTGCGCAGAACCATTTCCTGCGCATGTCC
TCGCGCCTGCGCAACCTGGGCGATCTGTTCAACCCAAGCCTGGCCGGCATTTCCGAGGCGGTGATTCCGCCCAACTCGCG
CCTGATCGGCAAGAACGCCGCCGAGCTGCGGCTGCGCAAGCAAAGCGGCATCAGCCTGCTGGCGATCAACCGCGACAAGC
AGGTGATTCGCGAGGACGTGCGCAACGTGGCACTGCGCGCCGGCGACATGCTGGTGTTTCACAGCATCTGGCAGGACCTG
GCGCAGGCCGCGGAAAGCCGCGACTTCGTGCCGGTCACCGACTTCCCGAAGGGCGAACAGCGCCCGCACAAGTTCAAGAT
CGCGATGGCGATCTTCGCCTTCACCATCCTGATTGCGCTGACCTCCAAGTTGCCGGTGGCACTGACCTTGATGACCGGCG
TGGCCTGCATGCTGGTGACCGGCGTGCTGCGCATGGACGAGGCCTACGCCTCGATCAACTGGAAGACCATCTTCATGATG
GCCGGGCTGATTCCGCTCGGCTGGGCGATGGACAGCAGCGGCACCGCGGCGTGGGTGGCCGGCCACACCATCGACCGCCT
GCCGGAAGGCATGCCGGTGTGGGCGCTGGAGATCAGCCTGGCCTTGTTGACGACCGCTTTTTCACTGGTGATCAGCCATG
TCGGCGCGACCATCGTGATGGTGCCGATCGCGGTCAACCTGGCGCTCGCGGCCAACGGCAACCCCACGGCGTTCGCCTTG
ATCGTAGCGTTGTCGGCATCCAACAACCTGATGACCGCCTCCAACCCGGTGATCTCGATGGTGACCGGCCCGGCCAACTA
CCAGCCGCGCGAGCTGTGGCGCGTGGGCGCACCGCTGTCACTGATCTACATCGTGGTGATGGTGACGATGATCAACCTGA
TGTTCTGGTGGGCGGCGCGCTGA

Upstream 100 bases:

>100_bases
ATCGCCAGGGCAGGCGCCAGCGGCGCCCGGATAACCTGCACGCGTCAGCGCCATCCGTTCTTGCCATTCCCCATTCCCGA
CTCCCCATTCCCGGCACCTC

Downstream 100 bases:

>100_bases
GCGCGTTGTGGCGGTAGAGGGGGAGCGTCGCGCCTCTGCGCTGAGTGATGGCGCGCCGTCGTGCCGACTTTACGAATACG
TGCGGTGCGCTGCGGTCGAT

Product: sulfur deprivation response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSGNAVMSIIATTILGAGLERTG
ALNRLATWLLRRSHGSEQRLMMMTLGISGLNSSFMQNPSVMALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVG
NSPLILLNDLLVSANNNLPSGMASIEPLTMFAPLPIGLALLVAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY
GIDGDVFELTVTAESPLVGMTLGEAEAIHDAPLLLALKTGNDTRLAPPADMRIWVGSVLGAMGKRQDVTDFAQNHFLRMS
SRLRNLGDLFNPSLAGISEAVIPPNSRLIGKNAAELRLRKQSGISLLAINRDKQVIREDVRNVALRAGDMLVFHSIWQDL
AQAAESRDFVPVTDFPKGEQRPHKFKIAMAIFAFTILIALTSKLPVALTLMTGVACMLVTGVLRMDEAYASINWKTIFMM
AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGMPVWALEISLALLTTAFSLVISHVGATIVMVPIAVNLALAANGNPTAFAL
IVALSASNNLMTASNPVISMVTGPANYQPRELWRVGAPLSLIYIVVMVTMINLMFWWAAR

Sequences:

>Translated_620_residues
MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSGNAVMSIIATTILGAGLERTG
ALNRLATWLLRRSHGSEQRLMMMTLGISGLNSSFMQNPSVMALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVG
NSPLILLNDLLVSANNNLPSGMASIEPLTMFAPLPIGLALLVAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY
GIDGDVFELTVTAESPLVGMTLGEAEAIHDAPLLLALKTGNDTRLAPPADMRIWVGSVLGAMGKRQDVTDFAQNHFLRMS
SRLRNLGDLFNPSLAGISEAVIPPNSRLIGKNAAELRLRKQSGISLLAINRDKQVIREDVRNVALRAGDMLVFHSIWQDL
AQAAESRDFVPVTDFPKGEQRPHKFKIAMAIFAFTILIALTSKLPVALTLMTGVACMLVTGVLRMDEAYASINWKTIFMM
AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGMPVWALEISLALLTTAFSLVISHVGATIVMVPIAVNLALAANGNPTAFAL
IVALSASNNLMTASNPVISMVTGPANYQPRELWRVGAPLSLIYIVVMVTMINLMFWWAAR
>Mature_620_residues
MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSGNAVMSIIATTILGAGLERTG
ALNRLATWLLRRSHGSEQRLMMMTLGISGLNSSFMQNPSVMALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVG
NSPLILLNDLLVSANNNLPSGMASIEPLTMFAPLPIGLALLVAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY
GIDGDVFELTVTAESPLVGMTLGEAEAIHDAPLLLALKTGNDTRLAPPADMRIWVGSVLGAMGKRQDVTDFAQNHFLRMS
SRLRNLGDLFNPSLAGISEAVIPPNSRLIGKNAAELRLRKQSGISLLAINRDKQVIREDVRNVALRAGDMLVFHSIWQDL
AQAAESRDFVPVTDFPKGEQRPHKFKIAMAIFAFTILIALTSKLPVALTLMTGVACMLVTGVLRMDEAYASINWKTIFMM
AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGMPVWALEISLALLTTAFSLVISHVGATIVMVPIAVNLALAANGNPTAFAL
IVALSASNNLMTASNPVISMVTGPANYQPRELWRVGAPLSLIYIVVMVTMINLMFWWAAR

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=642, Percent_Identity=26.791277258567, Blast_Score=184, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 66860; Mature: 66860

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSG
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
NAVMSIIATTILGAGLERTGALNRLATWLLRRSHGSEQRLMMMTLGISGLNSSFMQNPSV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHCCCCE
MALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVGNSPLILLNDLLVSANNNLPS
EEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCC
GMASIEPLTMFAPLPIGLALLVAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY
CCCCCCCHHEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHC
GIDGDVFELTVTAESPLVGMTLGEAEAIHDAPLLLALKTGNDTRLAPPADMRIWVGSVLG
CCCCCEEEEEEECCCCEEEEECCCHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
AMGKRQDVTDFAQNHFLRMSSRLRNLGDLFNPSLAGISEAVIPPNSRLIGKNAAELRLRK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEECCCHHHHEEHH
QSGISLLAINRDKQVIREDVRNVALRAGDMLVFHSIWQDLAQAAESRDFVPVTDFPKGEQ
HCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RPHKFKIAMAIFAFTILIALTSKLPVALTLMTGVACMLVTGVLRMDEAYASINWKTIFMM
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGMPVWALEISLALLTTAFSLVISHVGATIVM
HHHHHHCEEECCCCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHEEE
VPIAVNLALAANGNPTAFALIVALSASNNLMTASNPVISMVTGPANYQPRELWRVGAPLS
EEEHEEEEEECCCCCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCCHHHHHHCCCCHH
LIYIVVMVTMINLMFWWAAR
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSG
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
NAVMSIIATTILGAGLERTGALNRLATWLLRRSHGSEQRLMMMTLGISGLNSSFMQNPSV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHCCCCE
MALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVGNSPLILLNDLLVSANNNLPS
EEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCC
GMASIEPLTMFAPLPIGLALLVAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY
CCCCCCCHHEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHC
GIDGDVFELTVTAESPLVGMTLGEAEAIHDAPLLLALKTGNDTRLAPPADMRIWVGSVLG
CCCCCEEEEEEECCCCEEEEECCCHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH
AMGKRQDVTDFAQNHFLRMSSRLRNLGDLFNPSLAGISEAVIPPNSRLIGKNAAELRLRK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEECCCHHHHEEHH
QSGISLLAINRDKQVIREDVRNVALRAGDMLVFHSIWQDLAQAAESRDFVPVTDFPKGEQ
HCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RPHKFKIAMAIFAFTILIALTSKLPVALTLMTGVACMLVTGVLRMDEAYASINWKTIFMM
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGMPVWALEISLALLTTAFSLVISHVGATIVM
HHHHHHCEEECCCCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHEEE
VPIAVNLALAANGNPTAFALIVALSASNNLMTASNPVISMVTGPANYQPRELWRVGAPLS
EEEHEEEEEECCCCCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCCHHHHHHCCCCHH
LIYIVVMVTMINLMFWWAAR
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]