| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767267
Identifier: 66767267
GI number: 66767267
Start: 1122494
End: 1123432
Strand: Reverse
Name: 66767267
Synonym: XC_0935
Alternate gene names: NA
Gene position: 1123432-1122494 (Counterclockwise)
Preceding gene: 66767268
Following gene: 66767266
Centisome position: 21.82
GC content: 71.67
Gene sequence:
>939_bases ATGCCGTCCTCGCCGTCTGCTGCTGCCCCGTTGTCCGTCGCTGGCGATGGCGTGCGTCCGCAGCTGGCCGAGTTGATTGC GTTGCGCGGTGCCGCTCGCCAGCGGCATCAACCGGGCCGTGGCCGGCATGGGTTGGTGGGTCCGGTGCCGGCGGCAACAC GCGGGCGTGGCATGGAATACGCCGAGTCGCGCGAGTACGTGGCCGGCGATGATGCGCGGCATATCGACTGGCGCGTCACC GCACGCACCGGACGCGCGCACACCAAGTTGTTTCAGGCCGAACGCGAGCGGTTGAGCCTGATCGTGGCCGACACCGCGCC CGCGCTCTTCTTCGGCACCCGGGTGCGCTACAAGTCGGTGCAGGCGGCACGCGCCGGTGCCGTGGCGGCCTGGCTGGCGC AGCGGCAGGGCGACCGGATTGCCGCGTTGCGTGGCACCGCGAGCGAAGCGCCGATTGCGCCACGCGCCGGGCAGCGCGGG GTGTTGCCGGTGCTGGATGCCTTGGCGCGGTGGTATGCGCAGCCGCCGGCCGATGATGCCGGGTTGCAGGTCGGGCTCGA CCATGCGGCACGCCTGTTACGCCCGGGCGCGCGCCTCACCGTGCTCGCCGATGCACGCAGTGCCGCCGCGGTGCCCGAGT CGCGCTGGTCGGGGCTCGCCCTGCATCACGAGGTGGTGGTGATCGTGCTGGTGGATCCACTGGAGCTGGCACCGCCCGCG CGTGCGCTCACCTTCGACGCGGGCGGGCAACGGATCACCGTGGACCTCACCACGCAGGCCGGGCGCGCGCAGTGGAATGC CGAATTCGTTGCGCCGCTGGAACGGTTGTCGACGCTGCTGCAGGCGCGTGGTGTGCGCCTGCACCGTCTGTCCACGGCCG ATGCCAGCGATGCCTGGCTGGGCGGCAGCATCTCTAAGGTGCAGGGGTCATCGCGGTGA
Upstream 100 bases:
>100_bases GCGAACGTCTGGTCGCCGCGCTGTTGGAAAAGATTCCGCTGCCCTGATCGGGTAGCGTTGCTGCGGTATGCCGCCCTTTC GCCCGAAGCCGATCGCCTCG
Downstream 100 bases:
>100_bases CGCCCGACACCCTTCCGCTGCGCGATGTGCACCTGCCGCCATCACCGTCGTGGTGGCCGCTGGCCTTGGGCTGGTGGCTG GTGATCGCGGCAATCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPSSPSAAAPLSVAGDGVRPQLAELIALRGAARQRHQPGRGRHGLVGPVPAATRGRGMEYAESREYVAGDDARHIDWRVT ARTGRAHTKLFQAERERLSLIVADTAPALFFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASEAPIAPRAGQRG VLPVLDALARWYAQPPADDAGLQVGLDHAARLLRPGARLTVLADARSAAAVPESRWSGLALHHEVVVIVLVDPLELAPPA RALTFDAGGQRITVDLTTQAGRAQWNAEFVAPLERLSTLLQARGVRLHRLSTADASDAWLGGSISKVQGSSR
Sequences:
>Translated_312_residues MPSSPSAAAPLSVAGDGVRPQLAELIALRGAARQRHQPGRGRHGLVGPVPAATRGRGMEYAESREYVAGDDARHIDWRVT ARTGRAHTKLFQAERERLSLIVADTAPALFFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASEAPIAPRAGQRG VLPVLDALARWYAQPPADDAGLQVGLDHAARLLRPGARLTVLADARSAAAVPESRWSGLALHHEVVVIVLVDPLELAPPA RALTFDAGGQRITVDLTTQAGRAQWNAEFVAPLERLSTLLQARGVRLHRLSTADASDAWLGGSISKVQGSSR >Mature_311_residues PSSPSAAAPLSVAGDGVRPQLAELIALRGAARQRHQPGRGRHGLVGPVPAATRGRGMEYAESREYVAGDDARHIDWRVTA RTGRAHTKLFQAERERLSLIVADTAPALFFGTRVRYKSVQAARAGAVAAWLAQRQGDRIAALRGTASEAPIAPRAGQRGV LPVLDALARWYAQPPADDAGLQVGLDHAARLLRPGARLTVLADARSAAAVPESRWSGLALHHEVVVIVLVDPLELAPPAR ALTFDAGGQRITVDLTTQAGRAQWNAEFVAPLERLSTLLQARGVRLHRLSTADASDAWLGGSISKVQGSSR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33154; Mature: 33023
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSPSAAAPLSVAGDGVRPQLAELIALRGAARQRHQPGRGRHGLVGPVPAATRGRGMEY CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH AESREYVAGDDARHIDWRVTARTGRAHTKLFQAERERLSLIVADTAPALFFGTRVRYKSV HHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEEECCCCHHHHHCHHHHHHH QAARAGAVAAWLAQRQGDRIAALRGTASEAPIAPRAGQRGVLPVLDALARWYAQPPADDA HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC GLQVGLDHAARLLRPGARLTVLADARSAAAVPESRWSGLALHHEVVVIVLVDPLELAPPA CCEECHHHHHHHHCCCCEEEEEECCCCHHCCCCHHCCCEEEEEEEEEEEEECCCCCCCCC RALTFDAGGQRITVDLTTQAGRAQWNAEFVAPLERLSTLLQARGVRLHRLSTADASDAWL CEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC GGSISKVQGSSR CCCHHHCCCCCC >Mature Secondary Structure PSSPSAAAPLSVAGDGVRPQLAELIALRGAARQRHQPGRGRHGLVGPVPAATRGRGMEY CCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH AESREYVAGDDARHIDWRVTARTGRAHTKLFQAERERLSLIVADTAPALFFGTRVRYKSV HHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEEECCCCHHHHHCHHHHHHH QAARAGAVAAWLAQRQGDRIAALRGTASEAPIAPRAGQRGVLPVLDALARWYAQPPADDA HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC GLQVGLDHAARLLRPGARLTVLADARSAAAVPESRWSGLALHHEVVVIVLVDPLELAPPA CCEECHHHHHHHHCCCCEEEEEECCCCHHCCCCHHCCCEEEEEEEEEEEEECCCCCCCCC RALTFDAGGQRITVDLTTQAGRAQWNAEFVAPLERLSTLLQARGVRLHRLSTADASDAWL CEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC GGSISKVQGSSR CCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA