| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is ppa [H]
Identifier: 66767184
GI number: 66767184
Start: 1030491
End: 1031027
Strand: Reverse
Name: ppa [H]
Synonym: XC_0851
Alternate gene names: 66767184
Gene position: 1031027-1030491 (Counterclockwise)
Preceding gene: 66767186
Following gene: 66767183
Centisome position: 20.02
GC content: 63.5
Gene sequence:
>537_bases ATGGGCCTGGAACTGGTCACCTCCGGCAAGAACCTGCCGGAAGAAATCAACGTCGTCATCGAGATCCCCAAGGACTCGGA GCCGGTCAAGTACGAAGTGGACAAGGCCAGCGGCGCGATCTTCGTCGACCGCATCCTGTCGACCCCGATGCGCTACCCCT GCAACTACGGCTACGTGCCCAACACCCTGTGCGGCGACGGCGACCCGGCCGACGTGCTGGTGGTGCTGCCGCTGCCGCTG GTGCCCGGTTCGGTGGTGCGTTGCCGCCCGGTCGGCGTGCTGCGCATGAGCGATGAGGCCGGCAGCGACGAGAAGATCCT GGCAGTGCCGATCGAGAAGATCTTCTCCGGCTACGCCCACATCGAAGATATCGATCAGGTCTCCAGCCACTGGATGGAGC GCATCGGCCATTTCTTCGAGCATTACAAGGACTTGGAGAAAGGCAAGTGGGTCAAGCTGGACGGCTGGGGCGGCGCGGCG GAAGCCAAGCGCATCCTGGTGGAGTCGGTGGAACGCTATAATTCCGACGCGCCCTGA
Upstream 100 bases:
>100_bases CGCTGCTGTCAGACGGAGGCCTATTCAGTGTCGCTGCACCGCAACAGCCGAACGCGTAGAATCGGCCTCCACACACAGCT GAAGCCTCGGAGCTACGCGC
Downstream 100 bases:
>100_bases GCCGTCGACCGTGACGCTGCCCCGCACGCGCGGGGCGATCGGCATCACGCTTTTGGCGTGATGCCGGTGACCGCTGTCGG CAGATTGGGTACATTGCCGA
Product: inorganic pyrophosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MGLELVTSGKNLPEEINVVIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVPNTLCGDGDPADVLVVLPLPL VPGSVVRCRPVGVLRMSDEAGSDEKILAVPIEKIFSGYAHIEDIDQVSSHWMERIGHFFEHYKDLEKGKWVKLDGWGGAA EAKRILVESVERYNSDAP
Sequences:
>Translated_178_residues MGLELVTSGKNLPEEINVVIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVPNTLCGDGDPADVLVVLPLPL VPGSVVRCRPVGVLRMSDEAGSDEKILAVPIEKIFSGYAHIEDIDQVSSHWMERIGHFFEHYKDLEKGKWVKLDGWGGAA EAKRILVESVERYNSDAP >Mature_177_residues GLELVTSGKNLPEEINVVIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVPNTLCGDGDPADVLVVLPLPLV PGSVVRCRPVGVLRMSDEAGSDEKILAVPIEKIFSGYAHIEDIDQVSSHWMERIGHFFEHYKDLEKGKWVKLDGWGGAAE AKRILVESVERYNSDAP
Specific function: Unknown
COG id: COG0221
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790673, Length=172, Percent_Identity=60.4651162790698, Blast_Score=219, Evalue=1e-58,
Paralogues:
None
Copy number: 5480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008162 [H]
Pfam domain/function: PF00719 Pyrophosphatase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 19713; Mature: 19582
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLELVTSGKNLPEEINVVIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVP CCCEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCC NTLCGDGDPADVLVVLPLPLVPGSVVRCRPVGVLRMSDEAGSDEKILAVPIEKIFSGYAH CCCCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEHHHHHCCHHH IEDIDQVSSHWMERIGHFFEHYKDLEKGKWVKLDGWGGAAEAKRILVESVERYNSDAP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GLELVTSGKNLPEEINVVIEIPKDSEPVKYEVDKASGAIFVDRILSTPMRYPCNYGYVP CCEEEECCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCC NTLCGDGDPADVLVVLPLPLVPGSVVRCRPVGVLRMSDEAGSDEKILAVPIEKIFSGYAH CCCCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEHHHHHCCHHH IEDIDQVSSHWMERIGHFFEHYKDLEKGKWVKLDGWGGAAEAKRILVESVERYNSDAP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]