| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is htrB [H]
Identifier: 66767159
GI number: 66767159
Start: 991951
End: 992871
Strand: Reverse
Name: htrB [H]
Synonym: XC_0826
Alternate gene names: 66767159
Gene position: 992871-991951 (Counterclockwise)
Preceding gene: 66767161
Following gene: 66767155
Centisome position: 19.28
GC content: 66.67
Gene sequence:
>921_bases ATGTCCGAGTCCGCCAACGTCGCCGTCCGCCCTTCCCTGCGCAACCCCAAGCACTGGCCGATGTACCTGGGCCTGGCGGT GATGGTGCTCGCCGGGCGCCTGCCGTGGCTGCTGCAACGCGCGCTTGGCCGCGGCGTTGGTTGGGTGGCGATGCGCCTGG CGGGCACGCGCCGCCGCGCGGCCGAGGTCAACCTGAAACTGTGCTTCCCCGAGCAGGACGATGCGTGGCGGGCACGGCTG TTACGCGACAGCTTCGACGCACTGGGCGTGGGCCTGTTCGAATTCGCACGCGCCTGGTGGGGCAGCATCGCCACCATCCG CCCACGCATGCAGATCGAAGGCCTGGAACATCTGCAGCGGCTGCAGGAACAAAAGCGCGGCGTGCTGTTGGTGTCCGGAC ACTTCATGACCCTGGAAATGTGCGGGCGCCTGTTGTGCGACCACGTGCCGCTGGCCGGCATGTACCGCAAACACCGCAAT CCGGTGTTCGAGTGGGCGGTCAAGCGCGGCCGGCTGCGCTACGCCACGCACATGTTCGCCAACGAGGACCTGCGCGCCAC CATCAAGCATCTCAAGCGCGGTGGTTTCCTGTGGTACGCGCCGGACCAGGACATGCGCGGCAAGGACACGGTCTTTGTGC CGTTCTTCGGGCATCCGGCTTCCACCATTACCGCGACCCATCAGCTGGCGCGGCTCACCGGCTGCGCGGTGGTGCCGTAC TTCCATCGTCGCGAAGGCGGCAGCTACGTGCTGAAGATCGCACCGCCGCTGGCGGACATCCCCTCCGACGATGTGATTGC CGATACCACGCAGGTCAATGCGGCGATCGAGGACATGGTGCGCGAAGCGCCCGATCAATACCTGTGGATCCATCGCCGCT TCAAGCGGCAGCCCGGTGGGCGGAGCGACTTCTATCGCTGA
Upstream 100 bases:
>100_bases CCCTGCCAGTAGCGCTCACAACACGGTACGCGCGACACGTTGGCTGTACCGCCCACCGCCCACTCACCTCAAAGCCCGGA GCACGCTCTAGAATTACGCC
Downstream 100 bases:
>100_bases GGGCGCTGGCGCTGGCACTACGTGCTTGAGTGCTTGAGGTGCTTGAGTGCTTGAGTGCGGCGAGCGTCTAGCCAGGCGGG CCGCTGACGTACGTAGTTGA
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: Heat shock protein B [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSESANVAVRPSLRNPKHWPMYLGLAVMVLAGRLPWLLQRALGRGVGWVAMRLAGTRRRAAEVNLKLCFPEQDDAWRARL LRDSFDALGVGLFEFARAWWGSIATIRPRMQIEGLEHLQRLQEQKRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRKHRN PVFEWAVKRGRLRYATHMFANEDLRATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPY FHRREGGSYVLKIAPPLADIPSDDVIADTTQVNAAIEDMVREAPDQYLWIHRRFKRQPGGRSDFYR
Sequences:
>Translated_306_residues MSESANVAVRPSLRNPKHWPMYLGLAVMVLAGRLPWLLQRALGRGVGWVAMRLAGTRRRAAEVNLKLCFPEQDDAWRARL LRDSFDALGVGLFEFARAWWGSIATIRPRMQIEGLEHLQRLQEQKRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRKHRN PVFEWAVKRGRLRYATHMFANEDLRATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPY FHRREGGSYVLKIAPPLADIPSDDVIADTTQVNAAIEDMVREAPDQYLWIHRRFKRQPGGRSDFYR >Mature_305_residues SESANVAVRPSLRNPKHWPMYLGLAVMVLAGRLPWLLQRALGRGVGWVAMRLAGTRRRAAEVNLKLCFPEQDDAWRARLL RDSFDALGVGLFEFARAWWGSIATIRPRMQIEGLEHLQRLQEQKRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRKHRNP VFEWAVKRGRLRYATHMFANEDLRATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPYF HRREGGSYVLKIAPPLADIPSDDVIADTTQVNAAIEDMVREAPDQYLWIHRRFKRQPGGRSDFYR
Specific function: Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA. Has 10 fold selectivity for lauroyl- ACP over myristoyl-ACP [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1787292, Length=297, Percent_Identity=38.3838383838384, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI87082094, Length=294, Percent_Identity=37.0748299319728, Blast_Score=200, Evalue=8e-53, Organism=Escherichia coli, GI1788161, Length=304, Percent_Identity=27.3026315789474, Blast_Score=125, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 35042; Mature: 34911
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESANVAVRPSLRNPKHWPMYLGLAVMVLAGRLPWLLQRALGRGVGWVAMRLAGTRRRA CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCHHHH AEVNLKLCFPEQDDAWRARLLRDSFDALGVGLFEFARAWWGSIATIRPRMQIEGLEHLQR HEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHH LQEQKRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRKHRNPVFEWAVKRGRLRYATHMFA HHHHHCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHC NEDLRATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPY CCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEECCC FHRREGGSYVLKIAPPLADIPSDDVIADTTQVNAAIEDMVREAPDQYLWIHRRFKRQPGG HHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC RSDFYR CCCCCC >Mature Secondary Structure SESANVAVRPSLRNPKHWPMYLGLAVMVLAGRLPWLLQRALGRGVGWVAMRLAGTRRRA CCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCHHHH AEVNLKLCFPEQDDAWRARLLRDSFDALGVGLFEFARAWWGSIATIRPRMQIEGLEHLQR HEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHH LQEQKRGVLLVSGHFMTLEMCGRLLCDHVPLAGMYRKHRNPVFEWAVKRGRLRYATHMFA HHHHHCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHC NEDLRATIKHLKRGGFLWYAPDQDMRGKDTVFVPFFGHPASTITATHQLARLTGCAVVPY CCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEECCC FHRREGGSYVLKIAPPLADIPSDDVIADTTQVNAAIEDMVREAPDQYLWIHRRFKRQPGG HHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC RSDFYR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]