| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66767152
Identifier: 66767152
GI number: 66767152
Start: 979415
End: 980584
Strand: Reverse
Name: 66767152
Synonym: XC_0819
Alternate gene names: NA
Gene position: 980584-979415 (Counterclockwise)
Preceding gene: 66767155
Following gene: 66767151
Centisome position: 19.05
GC content: 65.64
Gene sequence:
>1170_bases ATGCGCCTCAATCCGCTCGTTCTTGCGCTGGCCATCGCCGCCGCGCCCGCCGCCCATGCCGCCACCTCGATCGAGAACTG GCCCACCAAGTACACCTTCGGTGACGGCACTGAAGTCGGCCTGACCGGCAACTACGCCTACGACGACAACAATTTCTCCG GCGACGACCGCCTGGAAGACCGCACCGATTTCCGCCGCAAGGAATTCGGCGCCACCTTGAAGAAGAAGGGCGTCTACGAC GCCATGGTGTATTTCGACTTCGAAGCCAAGCTGTGGCTTGACGTGTTCTTCCGCTTCGAAACCAAGGCGCTGCTGGGCCA GGACTACGGCCGGGTACGCCTGGGCTACATGAAGGTGCCGGTGGGCCTGGAAGCGGTGCAGAGTTCGCGTGCGGGCAGCT TCATGGAACTGGGCCTGCCGGTGCAGGCGGTGTTCCAGGGTCGCCGGACCGGCGTGGAATGGACCCTGGAACGCCCGCAG TACCTGCTGCAGGCCGGCGCATACGGCGGCCAGGACCTGCAGGGGGACAACCCCGGCACCACCCAGGCTGTGCATGCGGC CTGGACCCCGTTCAAGGCCGAAGGCAACGTGCTGCACCTGGGCATCGCCGGCTCGGTGGAAAACCCGCGCGGCTTCAGCG ACGGCCGTGGCGTGTCGTTCAGCCCGCGCGTGCGGCTGCGCGCCCGCCCGGAAGCCGGGTTGACCGATGTGCGCCTGATC GACACCGGCACCATCCTCGATGTGGATCACGTGATCCGCACCGGCGTGGAAGCGGTGTGGATCCACGGCCCGTTCTCGCT GCAGAGCGAAGCGCTGCGTGCCGAAGTGGCGCGTAATGCCGGCCAGCCGCACTTCATCGCCCAGGGCCAGTACGTGTATG GCACCTGGTCGCTGACCGGCGAGTCGCGTAGCTATGCCGGCGGCGTGCCAGGCAACATCAAGCCCGCCCACGATTACGGC GCGGTCGAACTGACTGCACGCTACAGCCGCCTGAATCTGGAAGACAACAACGTCCACGGCGGCCGTCAGCACGACACCAC CATCGGTGCCAACTGGTACCTCACCAGCCACTTCAAGATGCAGGCCAACTACAGCTGGGTGGATTCCTCGCGCAACGGCG TGCATGAAACCCCGCACGTGATGGAACTGCGCGCGCAGGTGATGTTCTAA
Upstream 100 bases:
>100_bases TGTTGGCCGTCCCGGACCCTGCGCGGTTCATGAAGCTGTTCATTGCGCTCGCCATGGCAGGACGCCCGGCCCCTACTTTT CCTCGCCGAAGATCATTCCT
Downstream 100 bases:
>100_bases GCGCCCACGGCTAACGCCTCATCCCGCATCACCCTGCGGCCGCCTCCTTCGGGACGCGGCCGCAGTCGTGTGTGCGGTGG CTGCGCCCAGCGCCCGCCGC
Product: polyphosphate-selective porin O
Products: NA
Alternate protein names: Polyphosphate-Selective Porin O; Phosphate-Selective Porin O And P Superfamily; Porin O; Porin P; Porin O/P Polyphosphate-Selective; Polyphosphate-Selective Porin O Protein; Phosphate Selective Porin; Porin Outer Membrane Protein; Phosphate-Selective Porin O And P Family
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MRLNPLVLALAIAAAPAAHAATSIENWPTKYTFGDGTEVGLTGNYAYDDNNFSGDDRLEDRTDFRRKEFGATLKKKGVYD AMVYFDFEAKLWLDVFFRFETKALLGQDYGRVRLGYMKVPVGLEAVQSSRAGSFMELGLPVQAVFQGRRTGVEWTLERPQ YLLQAGAYGGQDLQGDNPGTTQAVHAAWTPFKAEGNVLHLGIAGSVENPRGFSDGRGVSFSPRVRLRARPEAGLTDVRLI DTGTILDVDHVIRTGVEAVWIHGPFSLQSEALRAEVARNAGQPHFIAQGQYVYGTWSLTGESRSYAGGVPGNIKPAHDYG AVELTARYSRLNLEDNNVHGGRQHDTTIGANWYLTSHFKMQANYSWVDSSRNGVHETPHVMELRAQVMF
Sequences:
>Translated_389_residues MRLNPLVLALAIAAAPAAHAATSIENWPTKYTFGDGTEVGLTGNYAYDDNNFSGDDRLEDRTDFRRKEFGATLKKKGVYD AMVYFDFEAKLWLDVFFRFETKALLGQDYGRVRLGYMKVPVGLEAVQSSRAGSFMELGLPVQAVFQGRRTGVEWTLERPQ YLLQAGAYGGQDLQGDNPGTTQAVHAAWTPFKAEGNVLHLGIAGSVENPRGFSDGRGVSFSPRVRLRARPEAGLTDVRLI DTGTILDVDHVIRTGVEAVWIHGPFSLQSEALRAEVARNAGQPHFIAQGQYVYGTWSLTGESRSYAGGVPGNIKPAHDYG AVELTARYSRLNLEDNNVHGGRQHDTTIGANWYLTSHFKMQANYSWVDSSRNGVHETPHVMELRAQVMF >Mature_389_residues MRLNPLVLALAIAAAPAAHAATSIENWPTKYTFGDGTEVGLTGNYAYDDNNFSGDDRLEDRTDFRRKEFGATLKKKGVYD AMVYFDFEAKLWLDVFFRFETKALLGQDYGRVRLGYMKVPVGLEAVQSSRAGSFMELGLPVQAVFQGRRTGVEWTLERPQ YLLQAGAYGGQDLQGDNPGTTQAVHAAWTPFKAEGNVLHLGIAGSVENPRGFSDGRGVSFSPRVRLRARPEAGLTDVRLI DTGTILDVDHVIRTGVEAVWIHGPFSLQSEALRAEVARNAGQPHFIAQGQYVYGTWSLTGESRSYAGGVPGNIKPAHDYG AVELTARYSRLNLEDNNVHGGRQHDTTIGANWYLTSHFKMQANYSWVDSSRNGVHETPHVMELRAQVMF
Specific function: Unknown
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42977; Mature: 42977
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNPLVLALAIAAAPAAHAATSIENWPTKYTFGDGTEVGLTGNYAYDDNNFSGDDRLED CCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCEEEEECCEEECCCCCCCCCCCCH RTDFRRKEFGATLKKKGVYDAMVYFDFEAKLWLDVFFRFETKALLGQDYGRVRLGYMKVP HHHHHHHHHCCHHHHCCCEEEEEEEEECCEEEEEEEEHHHHHHHHCCCCCCEEEEEEECC VGLEAVQSSRAGSFMELGLPVQAVFQGRRTGVEWTLERPQYLLQAGAYGGQDLQGDNPGT CCHHHHHHCCCCCEEEECCCHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCC TQAVHAAWTPFKAEGNVLHLGIAGSVENPRGFSDGRGVSFSPRVRLRARPEAGLTDVRLI CCEEEEECCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE DTGTILDVDHVIRTGVEAVWIHGPFSLQSEALRAEVARNAGQPHFIAQGQYVYGTWSLTG ECCCEEEHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEEECC ESRSYAGGVPGNIKPAHDYGAVELTARYSRLNLEDNNVHGGRQHDTTIGANWYLTSHFKM CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEECCEEEEEEEEEE QANYSWVDSSRNGVHETPHVMELRAQVMF EECCEEECCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MRLNPLVLALAIAAAPAAHAATSIENWPTKYTFGDGTEVGLTGNYAYDDNNFSGDDRLED CCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCEEEEECCEEECCCCCCCCCCCCH RTDFRRKEFGATLKKKGVYDAMVYFDFEAKLWLDVFFRFETKALLGQDYGRVRLGYMKVP HHHHHHHHHCCHHHHCCCEEEEEEEEECCEEEEEEEEHHHHHHHHCCCCCCEEEEEEECC VGLEAVQSSRAGSFMELGLPVQAVFQGRRTGVEWTLERPQYLLQAGAYGGQDLQGDNPGT CCHHHHHHCCCCCEEEECCCHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCC TQAVHAAWTPFKAEGNVLHLGIAGSVENPRGFSDGRGVSFSPRVRLRARPEAGLTDVRLI CCEEEEECCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE DTGTILDVDHVIRTGVEAVWIHGPFSLQSEALRAEVARNAGQPHFIAQGQYVYGTWSLTG ECCCEEEHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEEECC ESRSYAGGVPGNIKPAHDYGAVELTARYSRLNLEDNNVHGGRQHDTTIGANWYLTSHFKM CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEECCEEEEEEEEEE QANYSWVDSSRNGVHETPHVMELRAQVMF EECCEEECCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA