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The map label for this gene is amaB [H]

Identifier: 66766638

GI number: 66766638

Start: 348561

End: 349832

Strand: Reverse

Name: amaB [H]

Synonym: XC_0294

Alternate gene names: 66766638

Gene position: 349832-348561 (Counterclockwise)

Preceding gene: 66766641

Following gene: 66766637

Centisome position: 6.79

GC content: 71.78

Gene sequence:

>1272_bases
ATGCTGAGTGCGGTAGCCAGCAACGCCCCCGTTGCCTCCGGCGCACGGGCCGTGGCGCGCTGTGATGCGCTGGGCGTGGC
GCCCTTCAGCGACACCCCCACCGGTCTGTTCCGCAGCTGGCTCAGCCCGGCGCATCGCGCCACCACCGAGCAGGTGGGCG
CGTGGATGCGCCAGGCCGGCATGCAGGTGCGCCTGGATGCGGCCGCCAATCTGGTCGGGCGCTACGAAGGCGCGCATGCG
CACGCACCGGCGCTGTTGATCGGCAGCCACCTGGACAGCGTGCGCGCGGCCGGGCGCTATGACGGCCCGCTGGGCGTGCT
GCTCGGCATCGAATGCGTGGCCGCGCTGCACGCACAAGGGCGCCGGCTGCCGTTTGCGATCGAAGTCGTTGGGTTCGGCG
ATGAAGAAGGCTCGCGCTTTCCGGCATCGATGTTCTGTAGCCGCGCGGTGGCCGGCACGCTGGATGCGGCCGCCCTGGCC
GTGCGCGATCCAGACGGCGTCGACGTGGCCACCGCGCTGGCCGCGTGGGGCCTGGACGCCGCACGTCTACATGAAGCCGC
GCGCGTGCCGGGCAGCGTGCTGGCGTATCTGGAAACGCATATCGAACAAGGCCCGGTGCTGGAAGTCGCGCAGCTGCCGG
TTGGCATCGTCACCGGCATCGCCGCGCAACGGCGCTTTCGGCTGCGCTTCGACGGCCGCGCCGGCCACGCCGGCACCACC
ACCATGGCGCTGCGCCGCGATGCCTTGAGCGCGGCCGCCGAAGCGCTGCTGATGATCGAGCAGATTGCGCGCAGTGGCGG
CGACGATCTGGTTGCCACCGTTGGCAAGCTGGAGGTCGCCCCCGGCGCCATCAACGTGGTGCCCGGCCGCGTGGACTGCA
CGCTGGACGTGCGCGCCGGCGATGACCACCGCCGCGACGCTGCAGTGGCGCAGATCGAACGCGCCCTGGAGCAGGTGGTT
GCCGCGCGCGGGGTTGCCATCGCCGTCGAGCCGCTGCAGGCGCTGGCGGCCAGCCCCTGCGCGCCGGCATTGATCGCCCG
CCTGACGCAAGCGGTCGCCGCGCAAGGCATCACACCACGGCCGCTGGTCTCCGGCGCCGGGCACGACGCCATGGTGATGG
CGGCGCTCTGCCCCACCGCGATGCTGTTCGTGCGCTGCGCCGGCGGCATCAGCCATCATCCGGACGAACACGTCGACCCG
GCCGATGCCGAGGTCGCCCTGGCGGTGATGCGCCATTTCATCGAACACTTCGGAGCTCCCATTGGCACCTGA

Upstream 100 bases:

>100_bases
CGCCCCTCCCGCCCCGCAACACGGGCCACGACATCGAGCACGCAGACATGCCCCAGCCCACCGCTGCGTTTGCCCTGTCC
CACCACTGCCGGATCACCGC

Downstream 100 bases:

>100_bases
CCTGCGCCACCTGCACACCTTCGGCGAACTGGATCCGCCGCAACGCCTGTTGATGGGCCCCGGCCCGGTCAATGCGCATC
CACGCGTGCTGCGTGCGATG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MLSAVASNAPVASGARAVARCDALGVAPFSDTPTGLFRSWLSPAHRATTEQVGAWMRQAGMQVRLDAAANLVGRYEGAHA
HAPALLIGSHLDSVRAAGRYDGPLGVLLGIECVAALHAQGRRLPFAIEVVGFGDEEGSRFPASMFCSRAVAGTLDAAALA
VRDPDGVDVATALAAWGLDAARLHEAARVPGSVLAYLETHIEQGPVLEVAQLPVGIVTGIAAQRRFRLRFDGRAGHAGTT
TMALRRDALSAAAEALLMIEQIARSGGDDLVATVGKLEVAPGAINVVPGRVDCTLDVRAGDDHRRDAAVAQIERALEQVV
AARGVAIAVEPLQALAASPCAPALIARLTQAVAAQGITPRPLVSGAGHDAMVMAALCPTAMLFVRCAGGISHHPDEHVDP
ADAEVALAVMRHFIEHFGAPIGT

Sequences:

>Translated_423_residues
MLSAVASNAPVASGARAVARCDALGVAPFSDTPTGLFRSWLSPAHRATTEQVGAWMRQAGMQVRLDAAANLVGRYEGAHA
HAPALLIGSHLDSVRAAGRYDGPLGVLLGIECVAALHAQGRRLPFAIEVVGFGDEEGSRFPASMFCSRAVAGTLDAAALA
VRDPDGVDVATALAAWGLDAARLHEAARVPGSVLAYLETHIEQGPVLEVAQLPVGIVTGIAAQRRFRLRFDGRAGHAGTT
TMALRRDALSAAAEALLMIEQIARSGGDDLVATVGKLEVAPGAINVVPGRVDCTLDVRAGDDHRRDAAVAQIERALEQVV
AARGVAIAVEPLQALAASPCAPALIARLTQAVAAQGITPRPLVSGAGHDAMVMAALCPTAMLFVRCAGGISHHPDEHVDP
ADAEVALAVMRHFIEHFGAPIGT
>Mature_423_residues
MLSAVASNAPVASGARAVARCDALGVAPFSDTPTGLFRSWLSPAHRATTEQVGAWMRQAGMQVRLDAAANLVGRYEGAHA
HAPALLIGSHLDSVRAAGRYDGPLGVLLGIECVAALHAQGRRLPFAIEVVGFGDEEGSRFPASMFCSRAVAGTLDAAALA
VRDPDGVDVATALAAWGLDAARLHEAARVPGSVLAYLETHIEQGPVLEVAQLPVGIVTGIAAQRRFRLRFDGRAGHAGTT
TMALRRDALSAAAEALLMIEQIARSGGDDLVATVGKLEVAPGAINVVPGRVDCTLDVRAGDDHRRDAAVAQIERALEQVV
AARGVAIAVEPLQALAASPCAPALIARLTQAVAAQGITPRPLVSGAGHDAMVMAALCPTAMLFVRCAGGISHHPDEHVDP
ADAEVALAVMRHFIEHFGAPIGT

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=370, Percent_Identity=32.972972972973, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 43667; Mature: 43667

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAVASNAPVASGARAVARCDALGVAPFSDTPTGLFRSWLSPAHRATTEQVGAWMRQAG
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCC
MQVRLDAAANLVGRYEGAHAHAPALLIGSHLDSVRAAGRYDGPLGVLLGIECVAALHAQG
CEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
RRLPFAIEVVGFGDEEGSRFPASMFCSRAVAGTLDAAALAVRDPDGVDVATALAAWGLDA
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHCCCH
ARLHEAARVPGSVLAYLETHIEQGPVLEVAQLPVGIVTGIAAQRRFRLRFDGRAGHAGTT
HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCEEEEEECCCCCCCCCH
TMALRRDALSAAAEALLMIEQIARSGGDDLVATVGKLEVAPGAINVVPGRVDCTLDVRAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEEEECCCEEEEEEECCC
DDHRRDAAVAQIERALEQVVAARGVAIAVEPLQALAASPCAPALIARLTQAVAAQGITPR
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PLVSGAGHDAMVMAALCPTAMLFVRCAGGISHHPDEHVDPADAEVALAVMRHFIEHFGAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
IGT
CCC
>Mature Secondary Structure
MLSAVASNAPVASGARAVARCDALGVAPFSDTPTGLFRSWLSPAHRATTEQVGAWMRQAG
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCC
MQVRLDAAANLVGRYEGAHAHAPALLIGSHLDSVRAAGRYDGPLGVLLGIECVAALHAQG
CEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
RRLPFAIEVVGFGDEEGSRFPASMFCSRAVAGTLDAAALAVRDPDGVDVATALAAWGLDA
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHEEECCCCCCHHHHHHHHHCCCH
ARLHEAARVPGSVLAYLETHIEQGPVLEVAQLPVGIVTGIAAQRRFRLRFDGRAGHAGTT
HHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCEEEEEECCCCCCCCCH
TMALRRDALSAAAEALLMIEQIARSGGDDLVATVGKLEVAPGAINVVPGRVDCTLDVRAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCEEEECCCEEEEEEECCC
DDHRRDAAVAQIERALEQVVAARGVAIAVEPLQALAASPCAPALIARLTQAVAAQGITPR
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PLVSGAGHDAMVMAALCPTAMLFVRCAGGISHHPDEHVDPADAEVALAVMRHFIEHFGAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
IGT
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]