| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yehS [H]
Identifier: 66766631
GI number: 66766631
Start: 343211
End: 343684
Strand: Reverse
Name: yehS [H]
Synonym: XC_0287
Alternate gene names: 66766631
Gene position: 343684-343211 (Counterclockwise)
Preceding gene: 66766632
Following gene: 66766629
Centisome position: 6.68
GC content: 64.98
Gene sequence:
>474_bases ATGATTCACAACGATGTACTGCGCAGCATCCGCTACATGCTCGACCTCAGCGACGACAAGGTGGTGGAGATCGCCCAGCT GGCCGACCCCGCATTCGCGCTCGACAAGCCGCAGGTGCAGGCCTGGCTGAAGAAGGAAGACGAGCCCGGTTTCGAGCCCT GCACCGATGCGATGCTGGCGCGCTTTCTGGATGGCCTGGTGCTGCGCTTCCGCGGCCGCGACGAAAGCCAGCCGCCGCGC CCGCTGGAAACCCCCGTCGGCAACAACCTGGTGCTGAAGAAGCTGCGCGTGGCCTTCGAACTGAAGGACGTGGACATGCA CTCCATTTTCGCCAACGCCGGTTTCCCGCTGTCCAAGCCGGAACTGTCGGCGCTGTTCCGCCAACCCGGCCACAAGAACT TCCGCCCCTGCGGCGACCAACTGCTACGCGCCTTCCTCAAGGGCCTCACCGCCCGCATGCGCGAAGCCGGGTAA
Upstream 100 bases:
>100_bases CCGCGTCACCGGCGCAAGCGGCACCGACCACACGCCCGGTTTCACCGCGCGCCCGTAGAATGGCCGCTTTCCGGCACCGC GCCGGAGCTCCGGAACCGCC
Downstream 100 bases:
>100_bases GCCCGCGACCAGCAGACGCCTGCTCAACCGGCAGGCGGCCATGTGCGTGGAACCGGCATGGACGACGCGTACGTTCCGGT TCCTTTGCAGCAGTTGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MIHNDVLRSIRYMLDLSDDKVVEIAQLADPAFALDKPQVQAWLKKEDEPGFEPCTDAMLARFLDGLVLRFRGRDESQPPR PLETPVGNNLVLKKLRVAFELKDVDMHSIFANAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG
Sequences:
>Translated_157_residues MIHNDVLRSIRYMLDLSDDKVVEIAQLADPAFALDKPQVQAWLKKEDEPGFEPCTDAMLARFLDGLVLRFRGRDESQPPR PLETPVGNNLVLKKLRVAFELKDVDMHSIFANAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG >Mature_157_residues MIHNDVLRSIRYMLDLSDDKVVEIAQLADPAFALDKPQVQAWLKKEDEPGFEPCTDAMLARFLDGLVLRFRGRDESQPPR PLETPVGNNLVLKKLRVAFELKDVDMHSIFANAGFPLSKPELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=152, Percent_Identity=48.0263157894737, Blast_Score=152, Evalue=8e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 17757; Mature: 17757
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHNDVLRSIRYMLDLSDDKVVEIAQLADPAFALDKPQVQAWLKKEDEPGFEPCTDAMLA CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHH RFLDGLVLRFRGRDESQPPRPLETPVGNNLVLKKLRVAFELKDVDMHSIFANAGFPLSKP HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCH ELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIHNDVLRSIRYMLDLSDDKVVEIAQLADPAFALDKPQVQAWLKKEDEPGFEPCTDAMLA CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHH RFLDGLVLRFRGRDESQPPRPLETPVGNNLVLKKLRVAFELKDVDMHSIFANAGFPLSKP HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCH ELSALFRQPGHKNFRPCGDQLLRAFLKGLTARMREAG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]