Click here to switch to the map view.

The map label for this gene is 66766551

Identifier: 66766551

GI number: 66766551

Start: 254971

End: 256236

Strand: Reverse

Name: 66766551

Synonym: XC_0206

Alternate gene names: NA

Gene position: 256236-254971 (Counterclockwise)

Preceding gene: 66766552

Following gene: 66766548

Centisome position: 4.98

GC content: 68.88

Gene sequence:

>1266_bases
ATGAAAGTGCTGCGTACCGTCTTGATCCTGCTGGTTGCCGTGGCGCTGGGCGTGCTGGGCGCGCAATGGCTGTCGCACCA
GAACAGCTACGACCTGGGCAATGTGGTGGTCAGCGTGGGCGGCAACGATTACCGCGCCGCCATGCCGCAGGCGGTGCTGA
TCCTGGTCATCGCGCTGCTGGTGCTCTGGCTGTTGTGGACGCTGATCAGCCTGCCGTTCCGGGTGTGGGGCAAGTACCGC
CGCAAGAAGGGCCGTGCGCGCCTGATCGAAGGCCTGCGCGCTGCCGATCACGGCCAGTGGCAGCGTGCCGAGCGCCTGCT
GGTCAACGCCAGCGAGGACGAAGAAGTCAGCGGCATTGCCTTGGCCAGCGCCGTGCGCGTGGCCGATGCGCGCGGTGACG
TGGCCTCGGCCACGGCGCTGGCGCAGCAGCTGGCCGAGCGCGACCCCACCGCACACGCACTGCTGCAGGGCGAGCGGCAT
CTGGCGCAGCAGCGCCCGGTGGATGCGATCAATGCGCTCGACAGCGCCGCCGCCCAGCCGCTGCCGGCCCGCGGCCTGCT
GTTACGCACGCATGCACTGGCGCAGATCGGACGCGCCGACGAGGCCTATGGCCAACTCGGCGCCCTGCGTCAGCAGGCGG
TGTTGGCGCCGGAGGCCTACAGTGCACTGGAGGCCACATTGGCCGAGCAGACCTTGCTGCAGGCCGGCGATGCCAACGCC
CTGGCCGAACGCTGGGAAGCCTTGCCGAAAGCGCTGCGCACCTACCCGGCCGTCGTTGGCGCCTATGCCCAACGCGCAGC
CGTGCTGCACTGGGACGATGCTGCGGTGCACAGCCTGGAACAGGCGCTGGATACGCAGTGGGACGAATCGCTGGTGCGCC
TGTACGGCGTGTTGCCGCTGGAAAAATACGATTCGCGGCGTGCCAGTGCCCAGCGCTGGCTGACCCAGCATCCGGACAGC
CCCGGACTGCTGCTCACCCTGGCCCGCCTGTCGCGCCATCAGCAACAATGGTCGCAGGCCGAAGAATTCCTGCACCGCGC
ACTGGCCAATGGCGCCGGTGCCGATGCCTGGGAAGAACTGGGCCACGGGTTTGCGGCGGCCGGTGACCTGCTCTCCGCGC
AGCACTGCTACGCCAACGCACTGCGCGCCGCGCGCGGCGAACCGGTGCTGGAGATCATGCCGCAGCAATCCATCCGCGGC
CCGATCGTGGTGGCCCATGAAACCCCACCATCCGGCCCGATCACGCCGGATGATCGCCTCGTGTAA

Upstream 100 bases:

>100_bases
GCCTGCGCGAACTGCAACAAGCGCCACTGCGTCCGCGCCTGCCGGAACTGGGCACCACCCTGCTGCAACTGCAGGCCATG
CGTGAAGGGAGATCCACACA

Downstream 100 bases:

>100_bases
TCGATGCAATTGTTCGGCCTTGCAGCCGCGCACGCCACGGCTGCGCCACGTTGCATCAACGCTGGCGCTTTGCCTGCGGC
AGTGGCGGCAGATCGCTCAG

Product: porphyrin biosynthesis protein

Products: NA

Alternate protein names: Porphyrin Biosynthesis Protein; HemY Protein; Transmembrane HemY Porphyrin Biosynthesis Protein; HemY Domain-Containing Protein; HemY-Like Protein

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQAVLILVIALLVLWLLWTLISLPFRVWGKYR
RKKGRARLIEGLRAADHGQWQRAERLLVNASEDEEVSGIALASAVRVADARGDVASATALAQQLAERDPTAHALLQGERH
LAQQRPVDAINALDSAAAQPLPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPEAYSALEATLAEQTLLQAGDANA
LAERWEALPKALRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQWDESLVRLYGVLPLEKYDSRRASAQRWLTQHPDS
PGLLLTLARLSRHQQQWSQAEEFLHRALANGAGADAWEELGHGFAAAGDLLSAQHCYANALRAARGEPVLEIMPQQSIRG
PIVVAHETPPSGPITPDDRLV

Sequences:

>Translated_421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQAVLILVIALLVLWLLWTLISLPFRVWGKYR
RKKGRARLIEGLRAADHGQWQRAERLLVNASEDEEVSGIALASAVRVADARGDVASATALAQQLAERDPTAHALLQGERH
LAQQRPVDAINALDSAAAQPLPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPEAYSALEATLAEQTLLQAGDANA
LAERWEALPKALRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQWDESLVRLYGVLPLEKYDSRRASAQRWLTQHPDS
PGLLLTLARLSRHQQQWSQAEEFLHRALANGAGADAWEELGHGFAAAGDLLSAQHCYANALRAARGEPVLEIMPQQSIRG
PIVVAHETPPSGPITPDDRLV
>Mature_421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQAVLILVIALLVLWLLWTLISLPFRVWGKYR
RKKGRARLIEGLRAADHGQWQRAERLLVNASEDEEVSGIALASAVRVADARGDVASATALAQQLAERDPTAHALLQGERH
LAQQRPVDAINALDSAAAQPLPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPEAYSALEATLAEQTLLQAGDANA
LAERWEALPKALRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQWDESLVRLYGVLPLEKYDSRRASAQRWLTQHPDS
PGLLLTLARLSRHQQQWSQAEEFLHRALANGAGADAWEELGHGFAAAGDLLSAQHCYANALRAARGEPVLEIMPQQSIRG
PIVVAHETPPSGPITPDDRLV

Specific function: Unknown

COG id: COG3071

COG function: function code H; Uncharacterized enzyme of heme biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45691; Mature: 45691

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQAVLILVIALL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VLWLLWTLISLPFRVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVNASEDEEVSGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
LASAVRVADARGDVASATALAQQLAERDPTAHALLQGERHLAQQRPVDAINALDSAAAQP
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
LPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPEAYSALEATLAEQTLLQAGDANA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH
LAERWEALPKALRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQWDESLVRLYGVLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EKYDSRRASAQRWLTQHPDSPGLLLTLARLSRHQQQWSQAEEFLHRALANGAGADAWEEL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GHGFAAAGDLLSAQHCYANALRAARGEPVLEIMPQQSIRGPIVVAHETPPSGPITPDDRL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCC
V
C
>Mature Secondary Structure
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQAVLILVIALL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VLWLLWTLISLPFRVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVNASEDEEVSGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
LASAVRVADARGDVASATALAQQLAERDPTAHALLQGERHLAQQRPVDAINALDSAAAQP
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
LPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPEAYSALEATLAEQTLLQAGDANA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH
LAERWEALPKALRTYPAVVGAYAQRAAVLHWDDAAVHSLEQALDTQWDESLVRLYGVLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EKYDSRRASAQRWLTQHPDSPGLLLTLARLSRHQQQWSQAEEFLHRALANGAGADAWEEL
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GHGFAAAGDLLSAQHCYANALRAARGEPVLEIMPQQSIRGPIVVAHETPPSGPITPDDRL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA