Click here to switch to the map view.

The map label for this gene is 66048291

Identifier: 66048291

GI number: 66048291

Start: 6011956

End: 6012363

Strand: Direct

Name: 66048291

Synonym: Psyr_5067

Alternate gene names: NA

Gene position: 6011956-6012363 (Clockwise)

Preceding gene: 66048290

Following gene: 66048293

Centisome position: 98.66

GC content: 57.84

Gene sequence:

>408_bases
GTGGAAGAAGTCATTGAACAACTGCGTGAAGCAAATGAACCGGTTCCGGTTCCGCTTGAGCTGCCTGACGAAGACCAACT
GGTCGAGATCGAGGAACAGCTGTTCATCAACATTCCGTTTGTCTTCAAGGAATTTCTCCTGACAGTCAGCGATGTGGTGT
ATGGCAGCCTTGAACCCGTCACGGTGACCGACCCGCAGTCGCACACCTACCTGCCAGACGTGGCCGCCACGGCCTGGGAC
CTGGGCGTACCACGCGAGCTGATCCCGATCTGTCAGGACGGTGACGACTACTACTGCGTCGAGGAAGACGGCACTGTATT
GCTGTGGTCCGCCGAAGAAGAACTGGTCACCGAAGACAGCTGGGAGTCGGTCTGGCACTGGGCCCGGGATGTCTGGCTGG
AAAGCTGA

Upstream 100 bases:

>100_bases
GGACATGTCCGGGGTTTTTGTTTATCCGTTCGGATAGTTATTTTGAGAAAGGCTTTACGCTACTGTATAACCCGCGCCAT
CAAGTGAGAGGATCTGTGTC

Downstream 100 bases:

>100_bases
GACACCCCGCCACGCGTTTGAAGGATCTCCGGGCGCTAATGCCCGGGGGATTCCGGATGATTCCCCAGCGTCTCAAGCAA
CGCAATCTGCATCCGTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEEVIEQLREANEPVPVPLELPDEDQLVEIEEQLFINIPFVFKEFLLTVSDVVYGSLEPVTVTDPQSHTYLPDVAATAWD
LGVPRELIPICQDGDDYYCVEEDGTVLLWSAEEELVTEDSWESVWHWARDVWLES

Sequences:

>Translated_135_residues
MEEVIEQLREANEPVPVPLELPDEDQLVEIEEQLFINIPFVFKEFLLTVSDVVYGSLEPVTVTDPQSHTYLPDVAATAWD
LGVPRELIPICQDGDDYYCVEEDGTVLLWSAEEELVTEDSWESVWHWARDVWLES
>Mature_135_residues
MEEVIEQLREANEPVPVPLELPDEDQLVEIEEQLFINIPFVFKEFLLTVSDVVYGSLEPVTVTDPQSHTYLPDVAATAWD
LGVPRELIPICQDGDDYYCVEEDGTVLLWSAEEELVTEDSWESVWHWARDVWLES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15551; Mature: 15551

Theoretical pI: Translated: 3.42; Mature: 3.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEVIEQLREANEPVPVPLELPDEDQLVEIEEQLFINIPFVFKEFLLTVSDVVYGSLEPV
CHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHEEEECCHHHHHHHHHHHHHHHCCCCCE
TVTDPQSHTYLPDVAATAWDLGVPRELIPICQDGDDYYCVEEDGTVLLWSAEEELVTEDS
EEECCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHCCCC
WESVWHWARDVWLES
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEVIEQLREANEPVPVPLELPDEDQLVEIEEQLFINIPFVFKEFLLTVSDVVYGSLEPV
CHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHEEEECCHHHHHHHHHHHHHHHCCCCCE
TVTDPQSHTYLPDVAATAWDLGVPRELIPICQDGDDYYCVEEDGTVLLWSAEEELVTEDS
EEECCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHCCCC
WESVWHWARDVWLES
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA