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The map label for this gene is 66048236

Identifier: 66048236

GI number: 66048236

Start: 5947134

End: 5947613

Strand: Direct

Name: 66048236

Synonym: Psyr_5012

Alternate gene names: NA

Gene position: 5947134-5947613 (Clockwise)

Preceding gene: 66048235

Following gene: 66048239

Centisome position: 97.59

GC content: 57.5

Gene sequence:

>480_bases
ATGAACACACTTCACAGCAATCTGAAACCCGACACCCTTATCAAGAACCCGGTGGCGTGCCGAGTGGTGTCCGCCGTGGA
CGTCTCCGGTGATGCGGCCAGCGTGTGGGCTGTCGTCGGCAATTTCGGTGGCTTCCAGGCATTCATACCGGCGCTGGAGA
GCATCGAGGTCACTGGCGAAGGTCCGGGCTCGGTTCGCAGCAAGCTGTTCAAGGATGGCAACGTGGCCATCGAACAACTG
AACTCCAGGGACGATCAAGCGCTTTATATGACCTGGTCACTGATCCACACCAGCTTGCTGGTCAGCAATCTGTGGGCGGC
AATGACTGTTGAAGCAACCGGTGACGGCGATACCTGCATCGCCAGTTGGACGATTGTTGCCGACCCTGTTGAGAATGGGC
CTGAAGGGGATGCATTCGAGGCGTTTCTTCAGGGGTTTGCAGATGGCGCAATGAGTAACGTGCGCAGCCTGTTTGGCTGA

Upstream 100 bases:

>100_bases
ACCCGCAAAAGACTCCGGCGTTGCTGCGCAGGGGCTGCGAATACCTGAAAGAAATCGACTTCATCTGAGCCACTACCCCC
TGAGATAAATGGAGAACGAC

Downstream 100 bases:

>100_bases
TTGACGCTGCATCACAGCAGCCCGCTCGGAGCGAAAGCCTGAGCGGGCTCTTTATTTGATGCCCCATAACGACAAAACCC
CTCATCGCGTAAGCGATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNTLHSNLKPDTLIKNPVACRVVSAVDVSGDAASVWAVVGNFGGFQAFIPALESIEVTGEGPGSVRSKLFKDGNVAIEQL
NSRDDQALYMTWSLIHTSLLVSNLWAAMTVEATGDGDTCIASWTIVADPVENGPEGDAFEAFLQGFADGAMSNVRSLFG

Sequences:

>Translated_159_residues
MNTLHSNLKPDTLIKNPVACRVVSAVDVSGDAASVWAVVGNFGGFQAFIPALESIEVTGEGPGSVRSKLFKDGNVAIEQL
NSRDDQALYMTWSLIHTSLLVSNLWAAMTVEATGDGDTCIASWTIVADPVENGPEGDAFEAFLQGFADGAMSNVRSLFG
>Mature_159_residues
MNTLHSNLKPDTLIKNPVACRVVSAVDVSGDAASVWAVVGNFGGFQAFIPALESIEVTGEGPGSVRSKLFKDGNVAIEQL
NSRDDQALYMTWSLIHTSLLVSNLWAAMTVEATGDGDTCIASWTIVADPVENGPEGDAFEAFLQGFADGAMSNVRSLFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16781; Mature: 16781

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLHSNLKPDTLIKNPVACRVVSAVDVSGDAASVWAVVGNFGGFQAFIPALESIEVTGE
CCCCCCCCCCCHHHCCCHHEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCEEECCC
GPGSVRSKLFKDGNVAIEQLNSRDDQALYMTWSLIHTSLLVSNLWAAMTVEATGDGDTCI
CCHHHHHHHHCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCEEE
ASWTIVADPVENGPEGDAFEAFLQGFADGAMSNVRSLFG
EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNTLHSNLKPDTLIKNPVACRVVSAVDVSGDAASVWAVVGNFGGFQAFIPALESIEVTGE
CCCCCCCCCCCHHHCCCHHEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCEEECCC
GPGSVRSKLFKDGNVAIEQLNSRDDQALYMTWSLIHTSLLVSNLWAAMTVEATGDGDTCI
CCHHHHHHHHCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHEEEEECCCCCEEE
ASWTIVADPVENGPEGDAFEAFLQGFADGAMSNVRSLFG
EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA