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The map label for this gene is rhsB [H]

Identifier: 66048219

GI number: 66048219

Start: 5924594

End: 5925109

Strand: Direct

Name: rhsB [H]

Synonym: Psyr_4995

Alternate gene names: 66048219

Gene position: 5924594-5925109 (Clockwise)

Preceding gene: 66048218

Following gene: 66048220

Centisome position: 97.22

GC content: 50.58

Gene sequence:

>516_bases
GTGGATGAAAAAGAAGGCGAGGTAGAGAACAAGGTTTACTACTTTCATACCGACCAGATTGGTACACCGCTGGAGATGAC
CGACGCTGAAGGGCAGATCGTCTGGCAGGCCAAATACCGGGCGTGGGGCGCGGTGGAAAAGCTGGTGGTGAACGAGGTTG
AGCAGAACCTGCGGTTTCAGGGGCAGTATTTTGATGTCGAGACGGGACTGCACTACAACACGTTTCGGTATTATGACCCG
GAGATTGGGCGGTTTATTACACAGGATCCGATTGGGTTGTTGGGTGGGTTTAATCTTTACGGCTATGCGCCTAGTCCAAC
CGGGTGGGTTGATCCATACGGCCTATGCAAAAGTTCTTCAAGTGGTGCTAAAGGCGTCAATAAGGCCACGCACGACCTAG
AGAGGAATGGATATAAAATAGTTTCAGAGGAGGTGACAATGAAAGTAAACGGCAGCAGGGTCGTGCCGATATTGTCGCGC
AGGATGTACATGGTAACTACCACGTTTTTGAGGTAA

Upstream 100 bases:

>100_bases
ACGCTTTCTCTGGCAAGGCCTGCGGATGCTGCGTGAGGAAAGTCCGGGCCAGAGCAGCCTGTACCTCTAAGAGCCCGGCA
GCTATGCGCCGCTGGCACGC

Downstream 100 bases:

>100_bases
AACACGGCTCAGGTGGCCTTACTAAAAATCAAAAAGCTACTGGTGTTTATGATATGTCTAACCCTAGTAACACCACACAA
CACCTAGGTGGGGGAACGAT

Product: RHS protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEVEQNLRFQGQYFDVETGLHYNTFRYYDP
EIGRFITQDPIGLLGGFNLYGYAPSPTGWVDPYGLCKSSSSGAKGVNKATHDLERNGYKIVSEEVTMKVNGSRVVPILSR
RMYMVTTTFLR

Sequences:

>Translated_171_residues
MDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEVEQNLRFQGQYFDVETGLHYNTFRYYDP
EIGRFITQDPIGLLGGFNLYGYAPSPTGWVDPYGLCKSSSSGAKGVNKATHDLERNGYKIVSEEVTMKVNGSRVVPILSR
RMYMVTTTFLR
>Mature_171_residues
MDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEVEQNLRFQGQYFDVETGLHYNTFRYYDP
EIGRFITQDPIGLLGGFNLYGYAPSPTGWVDPYGLCKSSSSGAKGVNKATHDLERNGYKIVSEEVTMKVNGSRVVPILSR
RMYMVTTTFLR

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI48994942, Length=116, Percent_Identity=45.6896551724138, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1786917, Length=106, Percent_Identity=45.2830188679245, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1790020, Length=106, Percent_Identity=45.2830188679245, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1786706, Length=125, Percent_Identity=40.8, Blast_Score=100, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 19513; Mature: 19513

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEVEQNLRFQ
CCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEC
GQYFDVETGLHYNTFRYYDPEIGRFITQDPIGLLGGFNLYGYAPSPTGWVDPYGLCKSSS
CEEEEEECCCEECEEEEECCHHCCEECCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCC
SGAKGVNKATHDLERNGYKIVSEEVTMKVNGSRVVPILSRRMYMVTTTFLR
CCCCCCCHHHHHHHCCCEEEEEEEEEEEECCCEEEHHHHCCEEEEEEECCC
>Mature Secondary Structure
MDEKEGEVENKVYYFHTDQIGTPLEMTDAEGQIVWQAKYRAWGAVEKLVVNEVEQNLRFQ
CCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEC
GQYFDVETGLHYNTFRYYDPEIGRFITQDPIGLLGGFNLYGYAPSPTGWVDPYGLCKSSS
CEEEEEECCCEECEEEEECCHHCCEECCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCCC
SGAKGVNKATHDLERNGYKIVSEEVTMKVNGSRVVPILSRRMYMVTTTFLR
CCCCCCCHHHHHHHCCCEEEEEEEEEEEECCCEEEHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8041620; 9278503; 2644231; 2403547; 7934896 [H]