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The map label for this gene is 66048180

Identifier: 66048180

GI number: 66048180

Start: 5873877

End: 5875709

Strand: Direct

Name: 66048180

Synonym: Psyr_4956

Alternate gene names: NA

Gene position: 5873877-5875709 (Clockwise)

Preceding gene: 66048179

Following gene: 66048181

Centisome position: 96.39

GC content: 58.87

Gene sequence:

>1833_bases
ATGCTCGACGATCTGCTGCCCTATTACGAGAAGGAACTCTCGCACCTGCGCTTTCTGGGCCAGGAATTTGCCGCTCAATA
TCCGAAGATCGCTTCGCGACTGCTGATTGAGGGCGACAACTGCGAGGACCCGCACACCGAGCGCCTGATCGAGGCGTTCT
CGTTCCTGTCGGCTCGCGTGCACAAGAAACTCGATGATGAGTTTCCGGAAATCGTCGAGTCGTTCCTCGAGGTGCTGTAC
CCGCATTACTTGCGCCCTACCCCGTCGATGTCCATCGTCGAGTTCAACATGGGCAAGCAGGAAAAGGTCACCGAGTCCTA
TCGTGTGGCGCGACACACCGAACTGCACGCCAATCCGGTGGACGGCATCGTGTGCAAGTTCCGGACGTGCTACCCGGTCG
AGCTATGGCCGATTGCCGTGCAGAGCGCGTCGTTCATCGAAATGGAACGCTCGGCGTTCAACGGCCACAGCGCAGACCTG
ATTGCACGTCTGCGCATTGGTCTGACGGCCACCTCCGACGTGCTGTTCGGCAAGATGGAAATGGACAGCCTGCGCTTTTT
CCTCGATGGCGAAAGCACGCTCATGCATCAACTGTATGAGCTGCTGTTCAACAACCTGGCCAAGGCCACGCTGTCCTTCG
AAGACGAAGGCCGCACTCGCGAAGTGGTGCTGCCCGCCGGCGCCTTGAAGTCTGTCGGTTACGGTCTGGATGAAGGGCTG
GTGGATTACTCGGAGCGTTCGTTTCTCGGTTATCGGTTGCTGCACGAGTACTTCACCTTCCCGGACAAGTTCATGTTCTT
CGACCTGTCGGGCTTTGCGCGCATTCTGGCGGGCAAAGAGATCGGCAAAGTGGAGATCAATTTCTACTTTTCCGACTACG
ACCTGACGGACCGTCTGGCGCGCCTGACGCAGAACGTCAGCCGCAACAATTTCAAGCTCAACTGCACGCCGATCATCAAC
CTGTTCCGCCAGCAGGCCGAGCCGATCAAGCTGACCCACGTCCAGCATGAATACGCTGTCACGCCGGATGTGCGCCTGCA
AAGCTCCGCCGAAGTGGTCTCGATCGATCGCGTGCGCCGGGTCAAGAAGATCAATGGCAACGACCAGGTCGGCACCTGCC
ATCCGTTCTTCGAACCACGCGGCGATCAAGGCCCGGGACAGAGTTTCTGGATCGCCCGGCGCCGGCCGACGCAGAGCCGG
CAAAGTGACGGCTCAAACATGTTCATCCGGGTCGTGGATCGGGATCTGGAGCTGATCGATTCCAACAATGACACGCTCAG
TATCCGTCTGACGTGCAGCAATCGCGACCTGCCATTGATGCTGCCTTTTGGCGGCGAGCGCGGCGATTTCAACATTCCGT
CGAACTCAGTGATCAAGGACATCCGCTGCCTGCGCAAGCCTACGGCGACGGTGCGCGTGCCGCTGGGCAACGGCGTGATC
TGGCGGCTTATTTCGCACCTGTCACTCAACCACATGTCGCTGGTTTCCAAGGGACGCGAGGTGCTGCTGGAACTGCTGTC
GCTTTACAACTACCGCAACGTGTCGGCGATCCGCAAACAGATCAACGGGATCGTTTCGGTGAGCAGCGAGCCGGTCGTGG
CACGCATCGGCCATCCGCGGCCGAACTTCGTGCGCGGCGTCGGCATCACGCTGAAGTTCGATGAAAGCCAGTACACCGGC
AGTGGCGTGTTCCTGTTCGGCATGGTGCTTGATCACTTCTTTGGTCAGTACTGCTCGATGAACAGCTTTACCCAATTAAC
CCTTCGCACCTTGCAGCGCGAAAAGAGAGTGGTCCAATGGCCCCCGCGAACAGGCGATCAACCCCTGGTCTGA

Upstream 100 bases:

>100_bases
TGGACGCAGTACTGCGTCTGCAGGACATTTCGCGTCAGGTTTCCTTTGACGCCGTGCTGCAGGTCAACACTCAGGAATAC
AAAGTGCAGAACCTCAACTG

Downstream 100 bases:

>100_bases
TCGACCAGGCAAGGGCTGAGCCGCACCGATTCGAATTTTTCCAGTTGGTGCGTTTGCTTCGCCTGCACTACAGCAGGAAC
GGGCGTATGGACCTGGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MLDDLLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKLDDEFPEIVESFLEVLY
PHYLRPTPSMSIVEFNMGKQEKVTESYRVARHTELHANPVDGIVCKFRTCYPVELWPIAVQSASFIEMERSAFNGHSADL
IARLRIGLTATSDVLFGKMEMDSLRFFLDGESTLMHQLYELLFNNLAKATLSFEDEGRTREVVLPAGALKSVGYGLDEGL
VDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILAGKEIGKVEINFYFSDYDLTDRLARLTQNVSRNNFKLNCTPIIN
LFRQQAEPIKLTHVQHEYAVTPDVRLQSSAEVVSIDRVRRVKKINGNDQVGTCHPFFEPRGDQGPGQSFWIARRRPTQSR
QSDGSNMFIRVVDRDLELIDSNNDTLSIRLTCSNRDLPLMLPFGGERGDFNIPSNSVIKDIRCLRKPTATVRVPLGNGVI
WRLISHLSLNHMSLVSKGREVLLELLSLYNYRNVSAIRKQINGIVSVSSEPVVARIGHPRPNFVRGVGITLKFDESQYTG
SGVFLFGMVLDHFFGQYCSMNSFTQLTLRTLQREKRVVQWPPRTGDQPLV

Sequences:

>Translated_610_residues
MLDDLLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKLDDEFPEIVESFLEVLY
PHYLRPTPSMSIVEFNMGKQEKVTESYRVARHTELHANPVDGIVCKFRTCYPVELWPIAVQSASFIEMERSAFNGHSADL
IARLRIGLTATSDVLFGKMEMDSLRFFLDGESTLMHQLYELLFNNLAKATLSFEDEGRTREVVLPAGALKSVGYGLDEGL
VDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILAGKEIGKVEINFYFSDYDLTDRLARLTQNVSRNNFKLNCTPIIN
LFRQQAEPIKLTHVQHEYAVTPDVRLQSSAEVVSIDRVRRVKKINGNDQVGTCHPFFEPRGDQGPGQSFWIARRRPTQSR
QSDGSNMFIRVVDRDLELIDSNNDTLSIRLTCSNRDLPLMLPFGGERGDFNIPSNSVIKDIRCLRKPTATVRVPLGNGVI
WRLISHLSLNHMSLVSKGREVLLELLSLYNYRNVSAIRKQINGIVSVSSEPVVARIGHPRPNFVRGVGITLKFDESQYTG
SGVFLFGMVLDHFFGQYCSMNSFTQLTLRTLQREKRVVQWPPRTGDQPLV
>Mature_610_residues
MLDDLLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKLDDEFPEIVESFLEVLY
PHYLRPTPSMSIVEFNMGKQEKVTESYRVARHTELHANPVDGIVCKFRTCYPVELWPIAVQSASFIEMERSAFNGHSADL
IARLRIGLTATSDVLFGKMEMDSLRFFLDGESTLMHQLYELLFNNLAKATLSFEDEGRTREVVLPAGALKSVGYGLDEGL
VDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILAGKEIGKVEINFYFSDYDLTDRLARLTQNVSRNNFKLNCTPIIN
LFRQQAEPIKLTHVQHEYAVTPDVRLQSSAEVVSIDRVRRVKKINGNDQVGTCHPFFEPRGDQGPGQSFWIARRRPTQSR
QSDGSNMFIRVVDRDLELIDSNNDTLSIRLTCSNRDLPLMLPFGGERGDFNIPSNSVIKDIRCLRKPTATVRVPLGNGVI
WRLISHLSLNHMSLVSKGREVLLELLSLYNYRNVSAIRKQINGIVSVSSEPVVARIGHPRPNFVRGVGITLKFDESQYTG
SGVFLFGMVLDHFFGQYCSMNSFTQLTLRTLQREKRVVQWPPRTGDQPLV

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69722; Mature: 69722

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDDLLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH
HKKLDDEFPEIVESFLEVLYPHYLRPTPSMSIVEFNMGKQEKVTESYRVARHTELHANPV
HHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
DGIVCKFRTCYPVELWPIAVQSASFIEMERSAFNGHSADLIARLRIGLTATSDVLFGKME
CCEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCEECCHHEEEEEE
MDSLRFFLDGESTLMHQLYELLFNNLAKATLSFEDEGRTREVVLPAGALKSVGYGLDEGL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCHHHHHCCCCCCCCC
VDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILAGKEIGKVEINFYFSDYDLTDRLA
CCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHH
RLTQNVSRNNFKLNCTPIINLFRQQAEPIKLTHVQHEYAVTPDVRLQSSAEVVSIDRVRR
HHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEEEECCCEECCCCCEECCCCCCHHHHHHHH
VKKINGNDQVGTCHPFFEPRGDQGPGQSFWIARRRPTQSRQSDGSNMFIRVVDRDLELID
HHHCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEE
SNNDTLSIRLTCSNRDLPLMLPFGGERGDFNIPSNSVIKDIRCLRKPTATVRVPLGNGVI
CCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHH
WRLISHLSLNHMSLVSKGREVLLELLSLYNYRNVSAIRKQINGIVSVSSEPVVARIGHPR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCEEEECCCCC
PNFVRGVGITLKFDESQYTGSGVFLFGMVLDHFFGQYCSMNSFTQLTLRTLQREKRVVQW
CCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEC
PPRTGDQPLV
CCCCCCCCCC
>Mature Secondary Structure
MLDDLLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH
HKKLDDEFPEIVESFLEVLYPHYLRPTPSMSIVEFNMGKQEKVTESYRVARHTELHANPV
HHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
DGIVCKFRTCYPVELWPIAVQSASFIEMERSAFNGHSADLIARLRIGLTATSDVLFGKME
CCEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCEECCHHEEEEEE
MDSLRFFLDGESTLMHQLYELLFNNLAKATLSFEDEGRTREVVLPAGALKSVGYGLDEGL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCHHHHHCCCCCCCCC
VDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILAGKEIGKVEINFYFSDYDLTDRLA
CCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHH
RLTQNVSRNNFKLNCTPIINLFRQQAEPIKLTHVQHEYAVTPDVRLQSSAEVVSIDRVRR
HHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEEEECCCEECCCCCEECCCCCCHHHHHHHH
VKKINGNDQVGTCHPFFEPRGDQGPGQSFWIARRRPTQSRQSDGSNMFIRVVDRDLELID
HHHCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEE
SNNDTLSIRLTCSNRDLPLMLPFGGERGDFNIPSNSVIKDIRCLRKPTATVRVPLGNGVI
CCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHH
WRLISHLSLNHMSLVSKGREVLLELLSLYNYRNVSAIRKQINGIVSVSSEPVVARIGHPR
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECCCCEEEECCCCC
PNFVRGVGITLKFDESQYTGSGVFLFGMVLDHFFGQYCSMNSFTQLTLRTLQREKRVVQW
CCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEC
PPRTGDQPLV
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA