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The map label for this gene is 66048177

Identifier: 66048177

GI number: 66048177

Start: 5871317

End: 5871850

Strand: Direct

Name: 66048177

Synonym: Psyr_4953

Alternate gene names: NA

Gene position: 5871317-5871850 (Clockwise)

Preceding gene: 66048176

Following gene: 66048178

Centisome position: 96.35

GC content: 57.3

Gene sequence:

>534_bases
ATGGCGAAGAAGGAAAGTACCCAGCACAAACTTGACCGCGTTCGCGCGCCTCGGGTCCATATCACTTACGACGTGGACAT
CGGCGATGCTCAGGAAAAGAAAGAGCTGCCATTCGTTGTAGGCGTTCTGGGCGATTTCTCCGGCAACCCGCTGGAGCCGC
TGCCCAAGCTCAAGGATCGCAAGTTCATCTTCATCGACCGCGACAACTTCAACGGCGTCCTGAAAGGCATCAAGCCGCGC
CTGGCGTATCGCGTCGACAACACCCTGGCAAAAGACGGCACGCAACTCGGTGTCGAGCTGAACTTCAATGCGCTGGAAGA
CTTCGAGCCGCAGAACGTCGTGCGTCAGGTCGAGCCGCTGCGCAAGCTGCTGGAAGTGCGTAACAAGCTGGCTGACCTGC
GTAACAAGATGGGTGGCAACGACAAGCTTGAAGAGCTGCTGATGGACGTGTTGCAGAACACTGAAAAGCTGAAAACCCTG
GGCAAGGAATTCGGCCGTGAAGCCGCCGTTCCCGCCACCGACAGCAAAGAGTAA

Upstream 100 bases:

>100_bases
GCGTCTTTTGCTGACGATTGAAGGACTCTAATCGCGCCCGGCCTGCCGCAGGCCCGGTACGCAAACGACTTGCAGCGAGT
TGCTCGCACAGGAGATGACG

Downstream 100 bases:

>100_bases
GGAGGAGCCTGACGATGACCGATAAGCAACCCGTGACTCAGCAGGACAGCGCTCTGGTTGAAGTGGAAAACTTCGCCCCG
CAATCTTCCTTGCTCGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAKKESTQHKLDRVRAPRVHITYDVDIGDAQEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFIFIDRDNFNGVLKGIKPR
LAYRVDNTLAKDGTQLGVELNFNALEDFEPQNVVRQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTL
GKEFGREAAVPATDSKE

Sequences:

>Translated_177_residues
MAKKESTQHKLDRVRAPRVHITYDVDIGDAQEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFIFIDRDNFNGVLKGIKPR
LAYRVDNTLAKDGTQLGVELNFNALEDFEPQNVVRQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTL
GKEFGREAAVPATDSKE
>Mature_176_residues
AKKESTQHKLDRVRAPRVHITYDVDIGDAQEKKELPFVVGVLGDFSGNPLEPLPKLKDRKFIFIDRDNFNGVLKGIKPRL
AYRVDNTLAKDGTQLGVELNFNALEDFEPQNVVRQVEPLRKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTLG
KEFGREAAVPATDSKE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20080; Mature: 19949

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKESTQHKLDRVRAPRVHITYDVDIGDAQEKKELPFVVGVLGDFSGNPLEPLPKLKDR
CCCCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCC
KFIFIDRDNFNGVLKGIKPRLAYRVDNTLAKDGTQLGVELNFNALEDFEPQNVVRQVEPL
EEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
RKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTLGKEFGREAAVPATDSKE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AKKESTQHKLDRVRAPRVHITYDVDIGDAQEKKELPFVVGVLGDFSGNPLEPLPKLKDR
CCCCHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCC
KFIFIDRDNFNGVLKGIKPRLAYRVDNTLAKDGTQLGVELNFNALEDFEPQNVVRQVEPL
EEEEEECCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
RKLLEVRNKLADLRNKMGGNDKLEELLMDVLQNTEKLKTLGKEFGREAAVPATDSKE
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA