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The map label for this gene is zntR [H]

Identifier: 66048062

GI number: 66048062

Start: 5743715

End: 5744161

Strand: Direct

Name: zntR [H]

Synonym: Psyr_4838

Alternate gene names: 66048062

Gene position: 5743715-5744161 (Clockwise)

Preceding gene: 66048060

Following gene: 66048068

Centisome position: 94.26

GC content: 61.52

Gene sequence:

>447_bases
ATGAAAATCGGCGAACTGGCAAAACTGACCGACACCCAGGTCGAAACCATCCGTTATTACGAACGCGAAGGCCTGCTGCC
CGCGCCCGCCCGCAGCGATGGCAACTACCGGCTGTACACCCAGGCACACACGGAGCGCCTGTCGTTCATCCGCAATTGCC
GCAGCCTGGACATGACCCTTGGAGAAATCCGCAGCCTGCTCAACCTGCGCGACAGCCCGCAGGACCAGTGCGAAAACGTC
AACGCCCTGATCGACGAACACATCGAACACGTCAACGCCCGCGTCGCAAGCCTGCAAGCACTCCAGGAACAACTGCTCGA
CCTGCGCCGCCGCTGCAGCGATGGCACGACAGAACATTGCGCGATACTGGAAAGGCTGGAAGTGACGGGCGCTGTGGCAG
CGCCAGAGGGCGAGCCTTCACATGTGGGGAGGAGTCATGGGCATTGA

Upstream 100 bases:

>100_bases
ATCGTCGTGCCCATTCGTTGTGGCTCCAGGATTCTGCTTGTTGCCAAGTGAACACCCTGTAGCCACTATAGGGTCAAGCA
CTCAAACGAGATGAGTCCAA

Downstream 100 bases:

>100_bases
GACGGGTTTGAGATCTCTGGTGCAAGCTGCGCAGCTTGCACCACCGCCACAAGCTCAGTGATCGCCTTGACGAGCTGATC
CTTGGCAGCTTTCTCTTTCG

Product: regulatory protein, MerR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKIGELAKLTDTQVETIRYYEREGLLPAPARSDGNYRLYTQAHTERLSFIRNCRSLDMTLGEIRSLLNLRDSPQDQCENV
NALIDEHIEHVNARVASLQALQEQLLDLRRRCSDGTTEHCAILERLEVTGAVAAPEGEPSHVGRSHGH

Sequences:

>Translated_148_residues
MKIGELAKLTDTQVETIRYYEREGLLPAPARSDGNYRLYTQAHTERLSFIRNCRSLDMTLGEIRSLLNLRDSPQDQCENV
NALIDEHIEHVNARVASLQALQEQLLDLRRRCSDGTTEHCAILERLEVTGAVAAPEGEPSHVGRSHGH
>Mature_148_residues
MKIGELAKLTDTQVETIRYYEREGLLPAPARSDGNYRLYTQAHTERLSFIRNCRSLDMTLGEIRSLLNLRDSPQDQCENV
NALIDEHIEHVNARVASLQALQEQLLDLRRRCSDGTTEHCAILERLEVTGAVAAPEGEPSHVGRSHGH

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=139, Percent_Identity=38.1294964028777, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1786695, Length=126, Percent_Identity=34.1269841269841, Blast_Score=83, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 16673; Mature: 16673

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGELAKLTDTQVETIRYYEREGLLPAPARSDGNYRLYTQAHTERLSFIRNCRSLDMTL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCH
GEIRSLLNLRDSPQDQCENVNALIDEHIEHVNARVASLQALQEQLLDLRRRCSDGTTEHC
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AILERLEVTGAVAAPEGEPSHVGRSHGH
HHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIGELAKLTDTQVETIRYYEREGLLPAPARSDGNYRLYTQAHTERLSFIRNCRSLDMTL
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCH
GEIRSLLNLRDSPQDQCENVNALIDEHIEHVNARVASLQALQEQLLDLRRRCSDGTTEHC
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AILERLEVTGAVAAPEGEPSHVGRSHGH
HHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]