| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047926
Identifier: 66047926
GI number: 66047926
Start: 5572016
End: 5573950
Strand: Direct
Name: 66047926
Synonym: Psyr_4702
Alternate gene names: NA
Gene position: 5572016-5573950 (Clockwise)
Preceding gene: 66047924
Following gene: 66047927
Centisome position: 91.44
GC content: 60.98
Gene sequence:
>1935_bases ATGAGCAAGGCAGATGCTTTCACCCAGGCAGGCAAGACAGCCGTGCTGCAGAACATACACGGCACCATGCAGTTTCTGCA AAAATTCCCGCCATTCAATCAGATGGAAAACGCCCATCTGGCGTATCTGGTCGAGCAGTGTCAGTTGCGCTTCTACGCGG CCGGTGAAAGCATCATCAAGCCTGGCGACGGACCGGTGGAGCACTTTTACATCGTCAAGCAGGGTCGCATCGTCGGCGAG CGCCCGCATTCTGCCAAAGGCGGTACGGAAACAACATTCGAAATAACCACGGGCGAGTGTTTTCCACTCGCCGCCCTGCT CGGCGAGCGCGCCACTCGCACCGAGCATCTGGCTGCCGAAGACACGTTCTGCCTGCAGTTGAACAAGCAGGCGTTCATCA AGCTGTTCGCGCTCTCCACAACCTTTCGCGACTTTGCCTTGCGCGGTGTCAGCAGCCTGCTCGATCAAGTCAATCAACAA GTCCAGCAGCGCGCCGTCGAAACCCTGGGCACGCAGTACTCTCTGAATACCCGACTGGGTGAACTTGCCATGCGCCATCC GGTGATGTGCAGCCCGGAAACGCCCATGCGCGACGCCGTGCGGCTGATGCACGAGCAGCAGGTAGGCAGCATCGTGATTG TCGACGAGCGGCAGGCGCCGCTGGGCATCTTTACCCTGCGCGACCTGCGTGAGGCGGTTGCCGATGTGAATGCCGACTTC AGCGCACCGGTCAGGCACACCATGAGCCTGTCACCGTTCCACCTGAGCCCGGACGCCAGTGCATTCGACGCCGCCATCGC CATGACCGGTCGCCATATCGCGCACGTCTGCCTGGTCCGGGACGGGCGGTTGTGTGGCGTGGTGTCGGAGCGGGATCTGT TTTCCCTGCAACGGGTCGACCTGGTGCACCTGGCGCGGACCATCCGCAACGCACCACGCATCGAAGCGCTTGCCGGCTTG CGCGGCGATATTGTCCAGCTGGTCGATCGCATGCTCGCCCACGGCGCGTCTTCAACCCAGATAACCCAGATCATCACGCT GCTCAACGACCACACCGTATGCCGGGTGATCGAGCTGACGCTTGCAGAGAAAGGCGACCCCGGCATTGCCTTCAGCTGGC TGTGCTTTGGCAGCGAAGGCCGTCGCGAGCAGACACTGCATACCGATCAGGACAACGCCATTCTGTTCGAGGCCCAAGAT GCAGCAGAGGCAGAGCAGATTCGCCGATCACTGCTGCCGATCGCCGAACGTATCAATCAGAGCCTGGCGCAGTGCGGTTT TACCCTGTGCAAGGGCAACATCATGGCCGGCAACCCCGACCTGTGCCTGTCGCGCCTCGAATGGTCGCAGCGCTTCTCGA CGTTTATTCGCGAGGCGACACCGGAGAACCTGCTGGCCTCGAGTATCTATTTCGATCTGCGCGTGGTCTGGGGGGATGAA AGTGGCGTCGAGCAACTGCGCCGCGGCATTCTTGATCAGGTCGCAGACAACCGGCTGTTCCAGCGCATGATGGCCGACAA CGCACTGCGCCAGCGTCCGCCAGTGGGGCGCTTCAAGGATTTCGTGCTGGCCCGCAAAGGCAGCGAAAAGGATACGCTGG ACCTCAAGGTCGAAGGCCTGACGCCCTTCGTCGACGGTGCGCGCCTGCTGGCACTGGCCAACGGTATCGGCGTCAACAAC ACGCAGGAACGCCTGCGCCAACTGGTCGAGCGCGAAGTCATCGACCCGCTCGACGGTGCTGCGTATGAGGAGGCTTATCA CTTCATCCAGCAGACTCGCATGCAGCAACATCAGCTGCAAAGTCGCCAGAATCTGGCTTATTCCAACCGCATCGACCCCG ACACACTCAACCATCTGGACCGGCGCATTCTGCGCGAATCGTTTCGCCAGGCGCAGCGATTGCAAACCAGCCTGACCCTG CGTTATCAGCTATGA
Upstream 100 bases:
>100_bases ACGGCGGTGTCACTGGGTTCAAGGTAAGACTTACGTCCAATGGGCACCTGGCTGCAAGCGGCCGACCATGAGCACCAATA ACAAGAACGCGGAACAGGCC
Downstream 100 bases:
>100_bases ACCTGTTCGAATGGCTCAAACCACGGCCGAAAAAGACACCCTTGCACGCGCACCAACTGGAGCGCCTTAAACGACTGCCG GTGTGCGCGAACCTCAGTGA
Product: cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MSKADAFTQAGKTAVLQNIHGTMQFLQKFPPFNQMENAHLAYLVEQCQLRFYAAGESIIKPGDGPVEHFYIVKQGRIVGE RPHSAKGGTETTFEITTGECFPLAALLGERATRTEHLAAEDTFCLQLNKQAFIKLFALSTTFRDFALRGVSSLLDQVNQQ VQQRAVETLGTQYSLNTRLGELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVNADF SAPVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLVRDGRLCGVVSERDLFSLQRVDLVHLARTIRNAPRIEALAGL RGDIVQLVDRMLAHGASSTQITQIITLLNDHTVCRVIELTLAEKGDPGIAFSWLCFGSEGRREQTLHTDQDNAILFEAQD AAEAEQIRRSLLPIAERINQSLAQCGFTLCKGNIMAGNPDLCLSRLEWSQRFSTFIREATPENLLASSIYFDLRVVWGDE SGVEQLRRGILDQVADNRLFQRMMADNALRQRPPVGRFKDFVLARKGSEKDTLDLKVEGLTPFVDGARLLALANGIGVNN TQERLRQLVEREVIDPLDGAAYEEAYHFIQQTRMQQHQLQSRQNLAYSNRIDPDTLNHLDRRILRESFRQAQRLQTSLTL RYQL
Sequences:
>Translated_644_residues MSKADAFTQAGKTAVLQNIHGTMQFLQKFPPFNQMENAHLAYLVEQCQLRFYAAGESIIKPGDGPVEHFYIVKQGRIVGE RPHSAKGGTETTFEITTGECFPLAALLGERATRTEHLAAEDTFCLQLNKQAFIKLFALSTTFRDFALRGVSSLLDQVNQQ VQQRAVETLGTQYSLNTRLGELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVNADF SAPVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLVRDGRLCGVVSERDLFSLQRVDLVHLARTIRNAPRIEALAGL RGDIVQLVDRMLAHGASSTQITQIITLLNDHTVCRVIELTLAEKGDPGIAFSWLCFGSEGRREQTLHTDQDNAILFEAQD AAEAEQIRRSLLPIAERINQSLAQCGFTLCKGNIMAGNPDLCLSRLEWSQRFSTFIREATPENLLASSIYFDLRVVWGDE SGVEQLRRGILDQVADNRLFQRMMADNALRQRPPVGRFKDFVLARKGSEKDTLDLKVEGLTPFVDGARLLALANGIGVNN TQERLRQLVEREVIDPLDGAAYEEAYHFIQQTRMQQHQLQSRQNLAYSNRIDPDTLNHLDRRILRESFRQAQRLQTSLTL RYQL >Mature_643_residues SKADAFTQAGKTAVLQNIHGTMQFLQKFPPFNQMENAHLAYLVEQCQLRFYAAGESIIKPGDGPVEHFYIVKQGRIVGER PHSAKGGTETTFEITTGECFPLAALLGERATRTEHLAAEDTFCLQLNKQAFIKLFALSTTFRDFALRGVSSLLDQVNQQV QQRAVETLGTQYSLNTRLGELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVNADFS APVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLVRDGRLCGVVSERDLFSLQRVDLVHLARTIRNAPRIEALAGLR GDIVQLVDRMLAHGASSTQITQIITLLNDHTVCRVIELTLAEKGDPGIAFSWLCFGSEGRREQTLHTDQDNAILFEAQDA AEAEQIRRSLLPIAERINQSLAQCGFTLCKGNIMAGNPDLCLSRLEWSQRFSTFIREATPENLLASSIYFDLRVVWGDES GVEQLRRGILDQVADNRLFQRMMADNALRQRPPVGRFKDFVLARKGSEKDTLDLKVEGLTPFVDGARLLALANGIGVNNT QERLRQLVEREVIDPLDGAAYEEAYHFIQQTRMQQHQLQSRQNLAYSNRIDPDTLNHLDRRILRESFRQAQRLQTSLTLR YQL
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72313; Mature: 72181
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKADAFTQAGKTAVLQNIHGTMQFLQKFPPFNQMENAHLAYLVEQCQLRFYAAGESIIK CCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCC PGDGPVEHFYIVKQGRIVGERPHSAKGGTETTFEITTGECFPLAALLGERATRTEHLAAE CCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHCCC DTFCLQLNKQAFIKLFALSTTFRDFALRGVSSLLDQVNQQVQQRAVETLGTQYSLNTRLG CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH ELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVNADF HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCC SAPVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLVRDGRLCGVVSERDLFSLQRVD CCCHHHHCCCCCEECCCCCHHHHHHHHHCCHHHEEEEEEECCCEEEEECCCHHHHHHHHH LVHLARTIRNAPRIEALAGLRGDIVQLVDRMLAHGASSTQITQIITLLNDHTVCRVIELT HHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH LAEKGDPGIAFSWLCFGSEGRREQTLHTDQDNAILFEAQDAAEAEQIRRSLLPIAERINQ HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH SLAQCGFTLCKGNIMAGNPDLCLSRLEWSQRFSTFIREATPENLLASSIYFDLRVVWGDE HHHHCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCC SGVEQLRRGILDQVADNRLFQRMMADNALRQRPPVGRFKDFVLARKGSEKDTLDLKVEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECC TPFVDGARLLALANGIGVNNTQERLRQLVEREVIDPLDGAAYEEAYHFIQQTRMQQHQLQ CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SRQNLAYSNRIDPDTLNHLDRRILRESFRQAQRLQTSLTLRYQL HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure SKADAFTQAGKTAVLQNIHGTMQFLQKFPPFNQMENAHLAYLVEQCQLRFYAAGESIIK CCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCC PGDGPVEHFYIVKQGRIVGERPHSAKGGTETTFEITTGECFPLAALLGERATRTEHLAAE CCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHCCC DTFCLQLNKQAFIKLFALSTTFRDFALRGVSSLLDQVNQQVQQRAVETLGTQYSLNTRLG CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH ELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVNADF HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCC SAPVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLVRDGRLCGVVSERDLFSLQRVD CCCHHHHCCCCCEECCCCCHHHHHHHHHCCHHHEEEEEEECCCEEEEECCCHHHHHHHHH LVHLARTIRNAPRIEALAGLRGDIVQLVDRMLAHGASSTQITQIITLLNDHTVCRVIELT HHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH LAEKGDPGIAFSWLCFGSEGRREQTLHTDQDNAILFEAQDAAEAEQIRRSLLPIAERINQ HHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH SLAQCGFTLCKGNIMAGNPDLCLSRLEWSQRFSTFIREATPENLLASSIYFDLRVVWGDE HHHHCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCC SGVEQLRRGILDQVADNRLFQRMMADNALRQRPPVGRFKDFVLARKGSEKDTLDLKVEGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECC TPFVDGARLLALANGIGVNNTQERLRQLVEREVIDPLDGAAYEEAYHFIQQTRMQQHQLQ CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SRQNLAYSNRIDPDTLNHLDRRILRESFRQAQRLQTSLTLRYQL HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA