| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is apaH [H]
Identifier: 66047856
GI number: 66047856
Start: 5488939
End: 5489814
Strand: Direct
Name: apaH [H]
Synonym: Psyr_4629
Alternate gene names: 66047856
Gene position: 5488939-5489814 (Clockwise)
Preceding gene: 66047855
Following gene: 66047857
Centisome position: 90.08
GC content: 59.7
Gene sequence:
>876_bases ATGGCGGTGTACGCCGTGGGTGACCTGCAAGGCTGCCTCGAACCTCTGCAATGCCTGCTCGAGCACGTTCACTTCAACCC GGAGCAGGATCGCCTCTGGCTGGTAGGTGACCTCGTCAACCGTGGTCCGCAATCGCTGGAAACGCTTCGCTACCTGTACA GCCTTCGCGAATCGCTGGTGTGCGTGCTGGGTAATCATGACCTGCACCTGCTGGCAGTGGCGCGCAAAAAAGAGCTGCTG AAAAAAGGCGACACGCTGCTTGAAATCCTTGAAGCGCCTGACCGTGACGACCTGCTCGGCTGGGTGCGTCGGCAAAAGCT CATGCATTACGATGCTCAACGCAATGTCGCCATGGTGCATGCCGGTATCGCACCACAGTGGACGCTGAAAAAGGCCTTGA AGCACGCTGCCGAAGTCGAGCACGCGCTGCAGGACGAGCAGTTGTACGGCGCCTTTCTTGACGGCATGTACGGCAATGAA CCGACCAGGTGGGACAACGACCTGCAAGGCGTGACGCGTCTGCGGGTCATCACCAACTACTTCACGCGTATGCGCTTCTG CACCAGCGACGGCAAGCTCGATCTGAAGAGCAAGGAAGGGGTCGGCACCGCGATACCTGGCTACGCGCCCTGGTTCAGCC ACCAGAGCCGCAAGACCCGCGACGTGAAAATCATTTTCGGCCACTGGGCTGCGCTTGAAGGTCGCTGCGACGAACCGGAC GTCTTTGCCCTGGACAGCGGATGTGTCTGGGGCGGTTCGATGACGCTGCTCAATGTCGATACGCTTGAACGCCATCAGTG CAATTGCGATGCTATGGGCAATGCCGCAGACGGGCTTGTTACCCGAGTGCAACCCGGCGCTACTCCCCTTCCGTAA
Upstream 100 bases:
>100_bases GCAACATGCAGGGCACCTATCAGATGCTGGCCGAAGACGGCAAACGCTTCGATGCCGTCATCGAGCCATTCCGGCTGGCC GTTCCGGGCTCGCTGCACTG
Downstream 100 bases:
>100_bases CCTCAGGCTCAGGAGCCCAGGCAATGACTGAATTCAAACGTATCCCACCCGAACAGGCCCAGGCTCTGCGCGAGCAAGGC GCCGTGCTGGTCGATGTCCG
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MAVYAVGDLQGCLEPLQCLLEHVHFNPEQDRLWLVGDLVNRGPQSLETLRYLYSLRESLVCVLGNHDLHLLAVARKKELL KKGDTLLEILEAPDRDDLLGWVRRQKLMHYDAQRNVAMVHAGIAPQWTLKKALKHAAEVEHALQDEQLYGAFLDGMYGNE PTRWDNDLQGVTRLRVITNYFTRMRFCTSDGKLDLKSKEGVGTAIPGYAPWFSHQSRKTRDVKIIFGHWAALEGRCDEPD VFALDSGCVWGGSMTLLNVDTLERHQCNCDAMGNAADGLVTRVQPGATPLP
Sequences:
>Translated_291_residues MAVYAVGDLQGCLEPLQCLLEHVHFNPEQDRLWLVGDLVNRGPQSLETLRYLYSLRESLVCVLGNHDLHLLAVARKKELL KKGDTLLEILEAPDRDDLLGWVRRQKLMHYDAQRNVAMVHAGIAPQWTLKKALKHAAEVEHALQDEQLYGAFLDGMYGNE PTRWDNDLQGVTRLRVITNYFTRMRFCTSDGKLDLKSKEGVGTAIPGYAPWFSHQSRKTRDVKIIFGHWAALEGRCDEPD VFALDSGCVWGGSMTLLNVDTLERHQCNCDAMGNAADGLVTRVQPGATPLP >Mature_290_residues AVYAVGDLQGCLEPLQCLLEHVHFNPEQDRLWLVGDLVNRGPQSLETLRYLYSLRESLVCVLGNHDLHLLAVARKKELLK KGDTLLEILEAPDRDDLLGWVRRQKLMHYDAQRNVAMVHAGIAPQWTLKKALKHAAEVEHALQDEQLYGAFLDGMYGNEP TRWDNDLQGVTRLRVITNYFTRMRFCTSDGKLDLKSKEGVGTAIPGYAPWFSHQSRKTRDVKIIFGHWAALEGRCDEPDV FALDSGCVWGGSMTLLNVDTLERHQCNCDAMGNAADGLVTRVQPGATPLP
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=257, Percent_Identity=49.8054474708171, Blast_Score=255, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 32717; Mature: 32586
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYAVGDLQGCLEPLQCLLEHVHFNPEQDRLWLVGDLVNRGPQSLETLRYLYSLRESLV CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHE CVLGNHDLHLLAVARKKELLKKGDTLLEILEAPDRDDLLGWVRRQKLMHYDAQRNVAMVH EEECCCCEEEEEHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE AGIAPQWTLKKALKHAAEVEHALQDEQLYGAFLDGMYGNEPTRWDNDLQGVTRLRVITNY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH FTRMRFCTSDGKLDLKSKEGVGTAIPGYAPWFSHQSRKTRDVKIIFGHWAALEGRCDEPD HHHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC VFALDSGCVWGGSMTLLNVDTLERHQCNCDAMGNAADGLVTRVQPGATPLP EEEECCCEEECCCEEEEECCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure AVYAVGDLQGCLEPLQCLLEHVHFNPEQDRLWLVGDLVNRGPQSLETLRYLYSLRESLV EEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHE CVLGNHDLHLLAVARKKELLKKGDTLLEILEAPDRDDLLGWVRRQKLMHYDAQRNVAMVH EEECCCCEEEEEHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE AGIAPQWTLKKALKHAAEVEHALQDEQLYGAFLDGMYGNEPTRWDNDLQGVTRLRVITNY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH FTRMRFCTSDGKLDLKSKEGVGTAIPGYAPWFSHQSRKTRDVKIIFGHWAALEGRCDEPD HHHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC VFALDSGCVWGGSMTLLNVDTLERHQCNCDAMGNAADGLVTRVQPGATPLP EEEECCCEEECCCEEEEECCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA