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The map label for this gene is ucpA [C]

Identifier: 66047799

GI number: 66047799

Start: 5436041

End: 5436817

Strand: Direct

Name: ucpA [C]

Synonym: Psyr_4572

Alternate gene names: 66047799

Gene position: 5436041-5436817 (Clockwise)

Preceding gene: 66047798

Following gene: 66047800

Centisome position: 89.21

GC content: 61.39

Gene sequence:

>777_bases
ATGACCCGTTACGCCCTGATCACCGGCGCGTCCAGCGGCATAGGCCTGGCGATGGCCGAAGCGCTGGCACGTCGCGGTCG
CAACCTGATCCTGGTCGCCCGCCAGCGCGACCTGCTGGAAACAATTGCACTGGAATTGACTCAGCGTTTTGGCGTGGAAG
TGCTGTTTCGAGCCTGCGATCTGGGCGAGCCGCTGAGACTCTCGGGCTTTCTGCTGGAACTGGAAGACGGCGCCCATCAG
ATCGATCTGCTGGTCAACGCTGCGGGCATCGGCACCTGCGGACCTTTTCTGGCTCAGGACTGGAGCGCAGAGCAGGACCT
GATCGATCTGAACATTCTGGCCCTCACGCGCCTGTGCCACACGGTCGGCAACCTGATGGCCATTCAGGGCGGCGGCCAGA
TACTCAACATCGCCTCGGTGGCGGCATTCCAGCCCGGGCCATGGATGAGCACCTACTATGCAAGCAAGGCGTATGTGCTG
CATTTTTCCGAAGGGCTGCGCGAGGAAGTGAAGAAAGCCGGCGTAAAGGTCTCGGTGCTGTGCCCCGGCCCGACCAGGAC
GGCTTTTTTTCGCACCGCGCAGTTGCAGGTCAATGTGGATAACCTGATGAGCCCCGAAGAAGTGGCGCTGTATACCGTTC
GCGCGCTGGCAAAAAACCGCGCAGTGATCACTCCCGGTTTCGGTAACCGGCTGTGGACGCTTAGCCCGCGCCTGGTTTCA
CGCTGGCTGGCCCGCCAGATCAGCGGCTACATCAACAAGAAATACTGCCCGCACTGA

Upstream 100 bases:

>100_bases
CAGCGGATGTCAACATAGAGCCCGAAGAACAAAGCGACAAGTAATAGACTGCTCACGGTTCGGCAGACTGCCGGTCGCAA
CACGCTCAATGGAGAAATGC

Downstream 100 bases:

>100_bases
CCGACAAACGGCTGGGCGAGCCGCGTCTTGCTCAGTACACTCGGACGCGCTGAAGCACAGCGATACCCTGTGACGACCAT
CAACCGACAAGGAGCAAACG

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTRYALITGASSGIGLAMAEALARRGRNLILVARQRDLLETIALELTQRFGVEVLFRACDLGEPLRLSGFLLELEDGAHQ
IDLLVNAAGIGTCGPFLAQDWSAEQDLIDLNILALTRLCHTVGNLMAIQGGGQILNIASVAAFQPGPWMSTYYASKAYVL
HFSEGLREEVKKAGVKVSVLCPGPTRTAFFRTAQLQVNVDNLMSPEEVALYTVRALAKNRAVITPGFGNRLWTLSPRLVS
RWLARQISGYINKKYCPH

Sequences:

>Translated_258_residues
MTRYALITGASSGIGLAMAEALARRGRNLILVARQRDLLETIALELTQRFGVEVLFRACDLGEPLRLSGFLLELEDGAHQ
IDLLVNAAGIGTCGPFLAQDWSAEQDLIDLNILALTRLCHTVGNLMAIQGGGQILNIASVAAFQPGPWMSTYYASKAYVL
HFSEGLREEVKKAGVKVSVLCPGPTRTAFFRTAQLQVNVDNLMSPEEVALYTVRALAKNRAVITPGFGNRLWTLSPRLVS
RWLARQISGYINKKYCPH
>Mature_257_residues
TRYALITGASSGIGLAMAEALARRGRNLILVARQRDLLETIALELTQRFGVEVLFRACDLGEPLRLSGFLLELEDGAHQI
DLLVNAAGIGTCGPFLAQDWSAEQDLIDLNILALTRLCHTVGNLMAIQGGGQILNIASVAAFQPGPWMSTYYASKAYVLH
FSEGLREEVKKAGVKVSVLCPGPTRTAFFRTAQLQVNVDNLMSPEEVALYTVRALAKNRAVITPGFGNRLWTLSPRLVSR
WLARQISGYINKKYCPH

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI226371731, Length=188, Percent_Identity=32.4468085106383, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4557649, Length=217, Percent_Identity=33.6405529953917, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI7705855, Length=191, Percent_Identity=30.3664921465969, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI40254992, Length=187, Percent_Identity=29.9465240641711, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI32483357, Length=196, Percent_Identity=29.0816326530612, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI109715829, Length=195, Percent_Identity=30.2564102564103, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI31542939, Length=229, Percent_Identity=25.3275109170306, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI7657478, Length=217, Percent_Identity=29.4930875576037, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=27.5675675675676, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI20149619, Length=260, Percent_Identity=25.7692307692308, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI33667109, Length=221, Percent_Identity=24.4343891402715, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87082100, Length=219, Percent_Identity=29.6803652968037, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082160, Length=187, Percent_Identity=30.4812834224599, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787335, Length=189, Percent_Identity=31.2169312169312, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789378, Length=192, Percent_Identity=29.6875, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786701, Length=240, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789208, Length=205, Percent_Identity=29.7560975609756, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=28.021978021978, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790717, Length=199, Percent_Identity=25.6281407035176, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1786812, Length=192, Percent_Identity=30.2083333333333, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=191, Percent_Identity=31.9371727748691, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=192, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI212646214, Length=204, Percent_Identity=30.8823529411765, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25152911, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=192, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322067, Length=180, Percent_Identity=32.2222222222222, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6319635, Length=245, Percent_Identity=26.1224489795918, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6320089, Length=193, Percent_Identity=27.4611398963731, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24640442, Length=188, Percent_Identity=31.3829787234043, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24584748, Length=183, Percent_Identity=30.0546448087432, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI161076933, Length=183, Percent_Identity=30.0546448087432, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24584752, Length=233, Percent_Identity=31.3304721030043, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24584744, Length=255, Percent_Identity=26.2745098039216, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28574402, Length=255, Percent_Identity=26.2745098039216, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24580925, Length=194, Percent_Identity=32.9896907216495, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356301, Length=249, Percent_Identity=27.710843373494, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21357041, Length=196, Percent_Identity=31.1224489795918, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI21358495, Length=190, Percent_Identity=30, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17737361, Length=191, Percent_Identity=29.8429319371728, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24648944, Length=198, Percent_Identity=28.7878787878788, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007236, Length=189, Percent_Identity=26.4550264550265, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571526, Length=189, Percent_Identity=28.042328042328, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28256; Mature: 28125

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYALITGASSGIGLAMAEALARRGRNLILVARQRDLLETIALELTQRFGVEVLFRACD
CCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
LGEPLRLSGFLLELEDGAHQIDLLVNAAGIGTCGPFLAQDWSAEQDLIDLNILALTRLCH
CCCCCEECEEEEEECCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
TVGNLMAIQGGGQILNIASVAAFQPGPWMSTYYASKAYVLHFSEGLREEVKKAGVKVSVL
HHHCEEEECCCCCEEEEEHHHCCCCCCCCHHHHCCEEEEEEEHHHHHHHHHHCCCEEEEE
CPGPTRTAFFRTAQLQVNVDNLMSPEEVALYTVRALAKNRAVITPGFGNRLWTLSPRLVS
ECCCCCCCEEEEEEEEEEHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEECHHHHH
RWLARQISGYINKKYCPH
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TRYALITGASSGIGLAMAEALARRGRNLILVARQRDLLETIALELTQRFGVEVLFRACD
CEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHC
LGEPLRLSGFLLELEDGAHQIDLLVNAAGIGTCGPFLAQDWSAEQDLIDLNILALTRLCH
CCCCCEECEEEEEECCCCEEEEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHH
TVGNLMAIQGGGQILNIASVAAFQPGPWMSTYYASKAYVLHFSEGLREEVKKAGVKVSVL
HHHCEEEECCCCCEEEEEHHHCCCCCCCCHHHHCCEEEEEEEHHHHHHHHHHCCCEEEEE
CPGPTRTAFFRTAQLQVNVDNLMSPEEVALYTVRALAKNRAVITPGFGNRLWTLSPRLVS
ECCCCCCCEEEEEEEEEEHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEEECHHHHH
RWLARQISGYINKKYCPH
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA