Click here to switch to the map view.

The map label for this gene is 66047743

Identifier: 66047743

GI number: 66047743

Start: 5380613

End: 5381140

Strand: Direct

Name: 66047743

Synonym: Psyr_4516

Alternate gene names: NA

Gene position: 5380613-5381140 (Clockwise)

Preceding gene: 66047740

Following gene: 66047747

Centisome position: 88.3

GC content: 50.57

Gene sequence:

>528_bases
ATGCGTTCACTGAATATTTCTCAGGGGAAAACCTGTACTCGCCACAAAGTCACGATGCACGCAAAGCAATGGCCTATTAC
CGGTGGGCCTGTCGCTAGGCAACCCGTTTTACTCGTTCTAGGTTTCTACAAAGCGTTTGCCCGGTCTCTGCCAGTGGGCA
AGGAGCGCGGGCCTTGGATAAAGGAAGTCCTGCCAGCCATCAGCGATCCAGATGCTATGTCGAGGCGAGACGAACCGGTC
GCCCAAGGCGTCGACATTTCTGACTACCTTGCTATCCAAGGCCGTCATGCGATAACACATGCTGAGCGTGAAGACATCGT
CGACCCTGATGACACTGATGACCCCGAGGATCATCAGCGCATCCATCAGGACAAGACTTTGATGAGGCACCTCGCGGAAA
TCGGCCTACTTACCGAAGGATTCAGCATCAACTACTTAGCCAGTTTGGGAGATTTCCGAAAAGAGGTTTTAATTACCCGA
AAAGCATTAAAGCTAAAAGCGTCCGAAACTAAGTCATTTGATTTATGA

Upstream 100 bases:

>100_bases
CGCCTAGCTACGGCAATCGCTTGGCGTGAAAGCACAAAGGTCGAAATTGTGATGTGGGGAGGCGGTAGCCATCCGCACCG
TATCGGGATGCTTCGGAACA

Downstream 100 bases:

>100_bases
GGATTTAACATGCTACCGAGTTGGGCTCGACGTCGAATTTCATTTCTTGAACTATCTTCAATCGATCTCCACCAAGAGGG
CGATGCCCAAGTGTTCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRSLNISQGKTCTRHKVTMHAKQWPITGGPVARQPVLLVLGFYKAFARSLPVGKERGPWIKEVLPAISDPDAMSRRDEPV
AQGVDISDYLAIQGRHAITHAEREDIVDPDDTDDPEDHQRIHQDKTLMRHLAEIGLLTEGFSINYLASLGDFRKEVLITR
KALKLKASETKSFDL

Sequences:

>Translated_175_residues
MRSLNISQGKTCTRHKVTMHAKQWPITGGPVARQPVLLVLGFYKAFARSLPVGKERGPWIKEVLPAISDPDAMSRRDEPV
AQGVDISDYLAIQGRHAITHAEREDIVDPDDTDDPEDHQRIHQDKTLMRHLAEIGLLTEGFSINYLASLGDFRKEVLITR
KALKLKASETKSFDL
>Mature_175_residues
MRSLNISQGKTCTRHKVTMHAKQWPITGGPVARQPVLLVLGFYKAFARSLPVGKERGPWIKEVLPAISDPDAMSRRDEPV
AQGVDISDYLAIQGRHAITHAEREDIVDPDDTDDPEDHQRIHQDKTLMRHLAEIGLLTEGFSINYLASLGDFRKEVLITR
KALKLKASETKSFDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19664; Mature: 19664

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLNISQGKTCTRHKVTMHAKQWPITGGPVARQPVLLVLGFYKAFARSLPVGKERGPWI
CCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
KEVLPAISDPDAMSRRDEPVAQGVDISDYLAIQGRHAITHAEREDIVDPDDTDDPEDHQR
HHHHHCCCCCHHHHCCCCHHHCCCCHHHHHHCCCCHHHHHCCHHCCCCCCCCCCCHHHHH
IHQDKTLMRHLAEIGLLTEGFSINYLASLGDFRKEVLITRKALKLKASETKSFDL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRSLNISQGKTCTRHKVTMHAKQWPITGGPVARQPVLLVLGFYKAFARSLPVGKERGPWI
CCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
KEVLPAISDPDAMSRRDEPVAQGVDISDYLAIQGRHAITHAEREDIVDPDDTDDPEDHQR
HHHHHCCCCCHHHHCCCCHHHCCCCHHHHHHCCCCHHHHHCCHHCCCCCCCCCCCHHHHH
IHQDKTLMRHLAEIGLLTEGFSINYLASLGDFRKEVLITRKALKLKASETKSFDL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA