| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047738
Identifier: 66047738
GI number: 66047738
Start: 5374960
End: 5376048
Strand: Direct
Name: 66047738
Synonym: Psyr_4511
Alternate gene names: NA
Gene position: 5374960-5376048 (Clockwise)
Preceding gene: 66047737
Following gene: 66047740
Centisome position: 88.21
GC content: 43.62
Gene sequence:
>1089_bases GTGAAGATTTTGGGTTTCTCGATGATTAAATATATCCCGTTTTTGAAATTTAAACAAAATGAGATTCAAGGTGTTGCCCA GCTGGATTCAGGTATTAGAAGCCAGATAACACCATTGTATGATGTGCCGCGCTCACAAAACATAATGACCGAGATCGAAA TTTTAAAGCGAATTAGGTTGGCGTCCGCTGAGCTAAAAAAGTCTAAAGATGCTGATTCTGAGTATTGGTTTTTTGTAGAC AACCTTGATATCGATGAAAGTATAAATCTTGCAGGATCTTTCCAGTATCGGTATATACTTGACGCTCTCAAGGAGCACCG CTTGATGCCAGTAGTTGCTCTAGATCGCAGCCCTGATCACAACTCTGCAGCTTTCGACTTCATTCGAATAAAGCCAGGCA CGCTAGGTGTGCGTTTACAAGAAACTGATATCGAAAGCTACGGCATCACTAAGCCAAGACTCAACCTGCTTTGGAATAAT ATTCAGGCAGCCCAGCCTGCTGGTATCGTTCTTCTGATAGACCTTAGAATTGTTGATGACCATGCTGACTCTAAAAGAAA AGTCGAACGTTTTTTGTCTAGATTCAAGCTGGACTTTCAGGTTGATGCGACTGCAGTGTCAGGGTCTGTAATACCAGGTA ATATTGCAACCTTGATAGGAACGGATGTTAAAAAACATGTGGTGCGAGAAGAATACCGGCTCTGGCGCACCTTGACGAGC TCGCCTGACTACCAAAACGTCCTTTATGGGGATTATGGCGTGGTTAGTCCTGAGTATTCAGATCTCGACCTCAACCCTGA GCTGTTGAGTGGTGTGTCAACGCCAAAAGTTTTCTACACGCACAGTGACCAATTCTATATATCGCGTGGCAGGCGTTTCA AGACTCACGGTTACCAGCAGTATTTTACTATTTCCGATGATATTGTTAGGCAGGCTTTTTATCGAGGTGCTGCTTATTCA TATGGCGATAACTATATCCATGAGCGAAGCTATCTTGCTGTGCGCAGACCCCCTAAAGGTGGAAGCCCCAGCACTTGGAT AAAATCACTCACCGCTGCTCACATTACGTTCATTGTGAACAACATTTAA
Upstream 100 bases:
>100_bases GAAAGAGCAAGGGTTCATCCTGCTATTGCCGCCGGGATGCTGCGTCATCAATCCAAAAACTACAAGCTTTACCCTGAGCT TGTCCCAATCATGAATTTGC
Downstream 100 bases:
>100_bases TGGTCGACTGACGATTGCGCTCTGAATCCCGCTCAGGGCGTCCTCTTTAGTAACCCTCATGCTAATTGCCGTAGCAATGT CTGCACGTGTGAAGGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKILGFSMIKYIPFLKFKQNEIQGVAQLDSGIRSQITPLYDVPRSQNIMTEIEILKRIRLASAELKKSKDADSEYWFFVD NLDIDESINLAGSFQYRYILDALKEHRLMPVVALDRSPDHNSAAFDFIRIKPGTLGVRLQETDIESYGITKPRLNLLWNN IQAAQPAGIVLLIDLRIVDDHADSKRKVERFLSRFKLDFQVDATAVSGSVIPGNIATLIGTDVKKHVVREEYRLWRTLTS SPDYQNVLYGDYGVVSPEYSDLDLNPELLSGVSTPKVFYTHSDQFYISRGRRFKTHGYQQYFTISDDIVRQAFYRGAAYS YGDNYIHERSYLAVRRPPKGGSPSTWIKSLTAAHITFIVNNI
Sequences:
>Translated_362_residues MKILGFSMIKYIPFLKFKQNEIQGVAQLDSGIRSQITPLYDVPRSQNIMTEIEILKRIRLASAELKKSKDADSEYWFFVD NLDIDESINLAGSFQYRYILDALKEHRLMPVVALDRSPDHNSAAFDFIRIKPGTLGVRLQETDIESYGITKPRLNLLWNN IQAAQPAGIVLLIDLRIVDDHADSKRKVERFLSRFKLDFQVDATAVSGSVIPGNIATLIGTDVKKHVVREEYRLWRTLTS SPDYQNVLYGDYGVVSPEYSDLDLNPELLSGVSTPKVFYTHSDQFYISRGRRFKTHGYQQYFTISDDIVRQAFYRGAAYS YGDNYIHERSYLAVRRPPKGGSPSTWIKSLTAAHITFIVNNI >Mature_362_residues MKILGFSMIKYIPFLKFKQNEIQGVAQLDSGIRSQITPLYDVPRSQNIMTEIEILKRIRLASAELKKSKDADSEYWFFVD NLDIDESINLAGSFQYRYILDALKEHRLMPVVALDRSPDHNSAAFDFIRIKPGTLGVRLQETDIESYGITKPRLNLLWNN IQAAQPAGIVLLIDLRIVDDHADSKRKVERFLSRFKLDFQVDATAVSGSVIPGNIATLIGTDVKKHVVREEYRLWRTLTS SPDYQNVLYGDYGVVSPEYSDLDLNPELLSGVSTPKVFYTHSDQFYISRGRRFKTHGYQQYFTISDDIVRQAFYRGAAYS YGDNYIHERSYLAVRRPPKGGSPSTWIKSLTAAHITFIVNNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41408; Mature: 41408
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00496 PII_GLNB_UMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILGFSMIKYIPFLKFKQNEIQGVAQLDSGIRSQITPLYDVPRSQNIMTEIEILKRIRL CCCCHHHHHHHCCCCEECHHHHHHHHHHHHCHHHHCCCHHCCCCCCCHHHHHHHHHHHHH ASAELKKSKDADSEYWFFVDNLDIDESINLAGSFQYRYILDALKEHRLMPVVALDRSPDH HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC NSAAFDFIRIKPGTLGVRLQETDIESYGITKPRLNLLWNNIQAAQPAGIVLLIDLRIVDD CCCEEEEEEECCCCEEEEEEECCCHHCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEECC HADSKRKVERFLSRFKLDFQVDATAVSGSVIPGNIATLIGTDVKKHVVREEYRLWRTLTS CCCHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCC SPDYQNVLYGDYGVVSPEYSDLDLNPELLSGVSTPKVFYTHSDQFYISRGRRFKTHGYQQ CCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCEEEEECCCEEECCCCEE YFTISDDIVRQAFYRGAAYSYGDNYIHERSYLAVRRPPKGGSPSTWIKSLTAAHITFIVN EEEECHHHHHHHHHCCCCCCCCCCCEECCCEEEEECCCCCCCHHHHHHHHHHHEEEEEEE NI CC >Mature Secondary Structure MKILGFSMIKYIPFLKFKQNEIQGVAQLDSGIRSQITPLYDVPRSQNIMTEIEILKRIRL CCCCHHHHHHHCCCCEECHHHHHHHHHHHHCHHHHCCCHHCCCCCCCHHHHHHHHHHHHH ASAELKKSKDADSEYWFFVDNLDIDESINLAGSFQYRYILDALKEHRLMPVVALDRSPDH HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC NSAAFDFIRIKPGTLGVRLQETDIESYGITKPRLNLLWNNIQAAQPAGIVLLIDLRIVDD CCCEEEEEEECCCCEEEEEEECCCHHCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEECC HADSKRKVERFLSRFKLDFQVDATAVSGSVIPGNIATLIGTDVKKHVVREEYRLWRTLTS CCCHHHHHHHHHHHCEEEEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCC SPDYQNVLYGDYGVVSPEYSDLDLNPELLSGVSTPKVFYTHSDQFYISRGRRFKTHGYQQ CCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCEEEEECCCEEECCCCEE YFTISDDIVRQAFYRGAAYSYGDNYIHERSYLAVRRPPKGGSPSTWIKSLTAAHITFIVN EEEECHHHHHHHHHCCCCCCCCCCCEECCCEEEEECCCCCCCHHHHHHHHHHHEEEEEEE NI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA