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The map label for this gene is nagC [C]

Identifier: 66047728

GI number: 66047728

Start: 5364843

End: 5365973

Strand: Reverse

Name: nagC [C]

Synonym: Psyr_4501

Alternate gene names: 66047728

Gene position: 5365973-5364843 (Counterclockwise)

Preceding gene: 66047739

Following gene: 66047721

Centisome position: 88.06

GC content: 60.74

Gene sequence:

>1131_bases
ATGCCTCTCGACCTCGACACGCCACTTGATTCGCATCAACCGTTGAGCCTCAATGAACGCAAGTTGCTGGACATCCTTCG
CCGTCGAGGTGCGATCACCCGTGCTACGGTTTCAACCGAGATGGACCTGGCTCAGCAGTCAGTGCACCGGCTCATCGAAG
AGCTGATCAGTCGTGGACTGCTGCGCAGTGGTGAGCGCGTCAAGAACGGCCGCGGTCAACCCAGCCCGCGCATCGAACTG
GTCAATGAAGCGGTGTATGCCATCGGTGTATCGATCAACACCGACTCGGCGGTGGTCTGCGTCGCCGACCTGGGCTGCAA
TGTGCTCGAGCAGGTCACCCTGCGCACGCCGCCGTTAAGCCGCAACAGCACCCTGGATTCGCTGGAAAAGACCATCGAAC
GCATGCTTCAGCGCAACGGCATTGAAGCGCAACGCGTCGTCGGCATGGGCTTCGCGATTGCCGGCTTTTTTCTTGAAAAC
CGCCAGATCAATGCACCGGAACCGCTGCGCGACTGGTCATTGATGGATCTGCAACCGGTGCTGGAAGAACGTTTCGGCAT
GCCGGTCTGGCTGGAAAACAACGCCACCACCGCGGCCATCGGCGAAAGCCTGGTCGGCGTGGGCGCCTGGGCCAGCAACT
TCATCTACCTGTCGTTCAACTTCGGTTTCGGCGCGGGCGTCGTCATCAACGGCAAAGCGTATTTCGGCAGCCACGGCAAT
GCAGGCGAGATCACCCTCTACAACGACGAAGAATCGATAAACCGCCCGGCCTTGCGCTACTTGCTGGAAGACCTGCATCA
GAACGGCGTGCAGGTCGACTCGATCGAAGACCTGCGCCTGCGCTTCGACCCCGACTGGCCCGGTGTGGATACCTGGCTGA
CGCGCGTCAAGCCCACACTGGATCGCCTGATCAACGCACTGGCGGGCCTGTTCGATCCGCAGGCCGTGGTGTTTGGCGGG
CAATTACCGCCCGAATTGGGAAAACGCCTGATCGCCGCGACGACCTTCTGGGGCACCCATCGCTACAACTCCCCACCGCC
TCGGCCACAATTATTGCTGAGCGAAACGAATGGGGACGCGGCGGTTCTGGGGGCAGCGCTGGTGCCGTTGAAGGAGCGGT
TTTTTGTTTGA

Upstream 100 bases:

>100_bases
GACTTTTATTAAATTTTCATGATTGAAGCGTGCAGTGGATGGTGGGCGATACACTGCTCCACACGCCGACTGTTTTAATC
TCATCTGATTTGAAGACTCC

Downstream 100 bases:

>100_bases
TTCGTTGGGCGCTGGGTGGACAGGTATTGGCGGTTTTTGGGTGGTGCTGTTGACTGTTGTTGGGCCAAAGCTGGTGTTTC
AAGGGTTGTCGTAGTGCTGT

Product: ROK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MPLDLDTPLDSHQPLSLNERKLLDILRRRGAITRATVSTEMDLAQQSVHRLIEELISRGLLRSGERVKNGRGQPSPRIEL
VNEAVYAIGVSINTDSAVVCVADLGCNVLEQVTLRTPPLSRNSTLDSLEKTIERMLQRNGIEAQRVVGMGFAIAGFFLEN
RQINAPEPLRDWSLMDLQPVLEERFGMPVWLENNATTAAIGESLVGVGAWASNFIYLSFNFGFGAGVVINGKAYFGSHGN
AGEITLYNDEESINRPALRYLLEDLHQNGVQVDSIEDLRLRFDPDWPGVDTWLTRVKPTLDRLINALAGLFDPQAVVFGG
QLPPELGKRLIAATTFWGTHRYNSPPPRPQLLLSETNGDAAVLGAALVPLKERFFV

Sequences:

>Translated_376_residues
MPLDLDTPLDSHQPLSLNERKLLDILRRRGAITRATVSTEMDLAQQSVHRLIEELISRGLLRSGERVKNGRGQPSPRIEL
VNEAVYAIGVSINTDSAVVCVADLGCNVLEQVTLRTPPLSRNSTLDSLEKTIERMLQRNGIEAQRVVGMGFAIAGFFLEN
RQINAPEPLRDWSLMDLQPVLEERFGMPVWLENNATTAAIGESLVGVGAWASNFIYLSFNFGFGAGVVINGKAYFGSHGN
AGEITLYNDEESINRPALRYLLEDLHQNGVQVDSIEDLRLRFDPDWPGVDTWLTRVKPTLDRLINALAGLFDPQAVVFGG
QLPPELGKRLIAATTFWGTHRYNSPPPRPQLLLSETNGDAAVLGAALVPLKERFFV
>Mature_375_residues
PLDLDTPLDSHQPLSLNERKLLDILRRRGAITRATVSTEMDLAQQSVHRLIEELISRGLLRSGERVKNGRGQPSPRIELV
NEAVYAIGVSINTDSAVVCVADLGCNVLEQVTLRTPPLSRNSTLDSLEKTIERMLQRNGIEAQRVVGMGFAIAGFFLENR
QINAPEPLRDWSLMDLQPVLEERFGMPVWLENNATTAAIGESLVGVGAWASNFIYLSFNFGFGAGVVINGKAYFGSHGNA
GEITLYNDEESINRPALRYLLEDLHQNGVQVDSIEDLRLRFDPDWPGVDTWLTRVKPTLDRLINALAGLFDPQAVVFGGQ
LPPELGKRLIAATTFWGTHRYNSPPPRPQLLLSETNGDAAVLGAALVPLKERFFV

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=365, Percent_Identity=22.4657534246575, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787878, Length=328, Percent_Identity=21.3414634146341, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 41545; Mature: 41414

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDLDTPLDSHQPLSLNERKLLDILRRRGAITRATVSTEMDLAQQSVHRLIEELISRGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LRSGERVKNGRGQPSPRIELVNEAVYAIGVSINTDSAVVCVADLGCNVLEQVTLRTPPLS
HHCCCHHHCCCCCCCCHHHHHHHEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCC
RNSTLDSLEKTIERMLQRNGIEAQRVVGMGFAIAGFFLENRQINAPEPLRDWSLMDLQPV
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHH
LEERFGMPVWLENNATTAAIGESLVGVGAWASNFIYLSFNFGFGAGVVINGKAYFGSHGN
HHHHCCCCEEEECCCCHHHHHHHHHHHCCHHCCEEEEEEECCCCCCEEEECCEEECCCCC
AGEITLYNDEESINRPALRYLLEDLHQNGVQVDSIEDLRLRFDPDWPGVDTWLTRVKPTL
CCEEEEECCHHHCCHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHH
DRLINALAGLFDPQAVVFGGQLPPELGKRLIAATTFWGTHRYNSPPPRPQLLLSETNGDA
HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCCH
AVLGAALVPLKERFFV
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLDLDTPLDSHQPLSLNERKLLDILRRRGAITRATVSTEMDLAQQSVHRLIEELISRGL
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
LRSGERVKNGRGQPSPRIELVNEAVYAIGVSINTDSAVVCVADLGCNVLEQVTLRTPPLS
HHCCCHHHCCCCCCCCHHHHHHHEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCC
RNSTLDSLEKTIERMLQRNGIEAQRVVGMGFAIAGFFLENRQINAPEPLRDWSLMDLQPV
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHH
LEERFGMPVWLENNATTAAIGESLVGVGAWASNFIYLSFNFGFGAGVVINGKAYFGSHGN
HHHHCCCCEEEECCCCHHHHHHHHHHHCCHHCCEEEEEEECCCCCCEEEECCEEECCCCC
AGEITLYNDEESINRPALRYLLEDLHQNGVQVDSIEDLRLRFDPDWPGVDTWLTRVKPTL
CCEEEEECCHHHCCHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCHHHHHHHHHHHH
DRLINALAGLFDPQAVVFGGQLPPELGKRLIAATTFWGTHRYNSPPPRPQLLLSETNGDA
HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEECCCCH
AVLGAALVPLKERFFV
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]