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The map label for this gene is tonB2 [H]

Identifier: 66047707

GI number: 66047707

Start: 5342109

End: 5342918

Strand: Direct

Name: tonB2 [H]

Synonym: Psyr_4480

Alternate gene names: 66047707

Gene position: 5342109-5342918 (Clockwise)

Preceding gene: 66047705

Following gene: 66047708

Centisome position: 87.67

GC content: 68.52

Gene sequence:

>810_bases
ATGTCAACGCTGATACTGTCCCACCGATTACCGCCGCGTCAGCTACGCCACTGGCCAGATCAGCCTGTGGGTAACTGCAA
CGTTGCCCCATCGTCACTTGTCGTCCAGCACAGCGACAACACGCCACGCACATGGCCGCACGGCGCATTGGCGATTGCAC
TGGCGATCGGGTTGCATGCCGCGCTGGCAGCGTGGCTGATGGCCGATCACCCGCAAGCGCCCGAGCCGACCCCGCCGATG
CCGATCACCGTGCAGTGGGTACCGCCGCCCGTTGCGCCTCCGGTAGCCCAGCCGACGCCGCCCGAGCCAACGCCTCAGCC
AGCAGCGGAGCCGCCTGCGCCAGCTCCCAAGCCCGCGCCGCCTGAGCCCAAACCTGACGAGCTACCCAAGCCCAAGGCGC
AGCCCAGAACCGCGCCGAGCAAACCTGTCGCCAAACCTGTTGCGCCGGCGCCTTCCGTCGCGGCGCCCACACCGGCGCCT
GCTGCAGCGCCAGCGCCAAGACCTGCGCCAGCGGCGCCACAGACCACCACCGCGCCCATAGGCCGGGCCGGTTACCTGAA
CAATCCGCCGCCGGTCTACCCACCCGCCGCCGCGCGCCGCCATCAGGAAGGCACGACGATGCTGCGTGTGCATGTGCTGC
CCAACGGACGTACCGACCAGGTGCAAGTGCTGCAAAGCAGCGGCGTCCCGGCGCTGGATGAAGCCGCGCAGGTCGCCGTC
CGGCAATGGACCTTTATTCCCGCCAAACGCGGCGACACCCCGGTAGAAGGCTGGGTCAACGTCCCCATAGCCTTCAAACT
CGCACCCTGA

Upstream 100 bases:

>100_bases
CATAATTAATACACACAACGAGTATTAATATCAGCTCCAGTTGAAACGAGCCTTTCGCCAACACGACGGGCTCGTATTTT
TTCACGAGTGAGCTGAACTC

Downstream 100 bases:

>100_bases
GGCTCACGTCATGAACACCGCTTACTCCGTACTCATTACCCAATCCTCAATGGCCCTGCTGGTGATTTTCTCGCTGGTGA
CCTGGGCACTACTGCTCGGC

Product: TonB, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSTLILSHRLPPRQLRHWPDQPVGNCNVAPSSLVVQHSDNTPRTWPHGALAIALAIGLHAALAAWLMADHPQAPEPTPPM
PITVQWVPPPVAPPVAQPTPPEPTPQPAAEPPAPAPKPAPPEPKPDELPKPKAQPRTAPSKPVAKPVAPAPSVAAPTPAP
AAAPAPRPAPAAPQTTTAPIGRAGYLNNPPPVYPPAAARRHQEGTTMLRVHVLPNGRTDQVQVLQSSGVPALDEAAQVAV
RQWTFIPAKRGDTPVEGWVNVPIAFKLAP

Sequences:

>Translated_269_residues
MSTLILSHRLPPRQLRHWPDQPVGNCNVAPSSLVVQHSDNTPRTWPHGALAIALAIGLHAALAAWLMADHPQAPEPTPPM
PITVQWVPPPVAPPVAQPTPPEPTPQPAAEPPAPAPKPAPPEPKPDELPKPKAQPRTAPSKPVAKPVAPAPSVAAPTPAP
AAAPAPRPAPAAPQTTTAPIGRAGYLNNPPPVYPPAAARRHQEGTTMLRVHVLPNGRTDQVQVLQSSGVPALDEAAQVAV
RQWTFIPAKRGDTPVEGWVNVPIAFKLAP
>Mature_268_residues
STLILSHRLPPRQLRHWPDQPVGNCNVAPSSLVVQHSDNTPRTWPHGALAIALAIGLHAALAAWLMADHPQAPEPTPPMP
ITVQWVPPPVAPPVAQPTPPEPTPQPAAEPPAPAPKPAPPEPKPDELPKPKAQPRTAPSKPVAKPVAPAPSVAAPTPAPA
AAPAPRPAPAAPQTTTAPIGRAGYLNNPPPVYPPAAARRHQEGTTMLRVHVLPNGRTDQVQVLQSSGVPALDEAAQVAVR
QWTFIPAKRGDTPVEGWVNVPIAFKLAP

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 28189; Mature: 28057

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLILSHRLPPRQLRHWPDQPVGNCNVAPSSLVVQHSDNTPRTWPHGALAIALAIGLHA
CCEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
ALAAWLMADHPQAPEPTPPMPITVQWVPPPVAPPVAQPTPPEPTPQPAAEPPAPAPKPAP
HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEPKPDELPKPKAQPRTAPSKPVAKPVAPAPSVAAPTPAPAAAPAPRPAPAAPQTTTAPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRAGYLNNPPPVYPPAAARRHQEGTTMLRVHVLPNGRTDQVQVLQSSGVPALDEAAQVAV
CCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHH
RQWTFIPAKRGDTPVEGWVNVPIAFKLAP
HHHEEEECCCCCCCCCCEEECCEEEEECC
>Mature Secondary Structure 
STLILSHRLPPRQLRHWPDQPVGNCNVAPSSLVVQHSDNTPRTWPHGALAIALAIGLHA
CEEEECCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH
ALAAWLMADHPQAPEPTPPMPITVQWVPPPVAPPVAQPTPPEPTPQPAAEPPAPAPKPAP
HHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEPKPDELPKPKAQPRTAPSKPVAKPVAPAPSVAAPTPAPAAAPAPRPAPAAPQTTTAPI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRAGYLNNPPPVYPPAAARRHQEGTTMLRVHVLPNGRTDQVQVLQSSGVPALDEAAQVAV
CCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHH
RQWTFIPAKRGDTPVEGWVNVPIAFKLAP
HHHEEEECCCCCCCCCCEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]