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The map label for this gene is prmA [C]

Identifier: 66047692

GI number: 66047692

Start: 5326997

End: 5327650

Strand: Direct

Name: prmA [C]

Synonym: Psyr_4465

Alternate gene names: 66047692

Gene position: 5326997-5327650 (Clockwise)

Preceding gene: 66047691

Following gene: 66047693

Centisome position: 87.42

GC content: 64.83

Gene sequence:

>654_bases
ATGATCGCTCCGCAGCATCTGCAACACGCGCTGAGCGAACTGCTTGGCGACGCCCGGCTGGCCGTCACCGCGCTGCCGGG
CACCGAGCTGAAGCTGTGGCTGATCGACGATGTCAACATGGACCGCGCCTTCAGCCCGGAGGAAACGCGGCGCATTCTGG
AAGAACCACCGTACTGGAGCTTCTGCTGGGCGAGCGGCTTGGCCCCGGCGCGTTTTCTGGCTGAAAAACCGCACTGGGTG
GCCGGCAAGCGGGTACTGGACTTCGGTGCGGGCTCGGGTGTAGCGGGCATTGCCGCGCTCAGTGCCGGGGCGCTTGAGGT
GGTGGCCTGTGATCTCGATCCACTGGCGCTCGCTGCCTGCCGGGCCAATGCCGAACTCAATCAGGTGTCATTGCGTTACT
CGACGGATTTCTTTGCCGAGGCGGACCGCTTCGATCTGATTCTGGTCGCCGACGTGCTCTACGACCGCGCCAACCTGCCG
TTGCTTGATCAGTTTCTCTCCCGGGGCCGCGAGGCACTGGTGGCGGATTCCCGCGTGCGCGACTTCAAACACGCTGCCTA
CCAGCGTCTGACGATGCTGCATGCCCACACCCTGCCGGACCTGGCCGAACCGCACGAGTTTCGCGATGTGAGCCTCTATC
ACGCGGCGCGGTGA

Upstream 100 bases:

>100_bases
GCGCCAGCAAGTCCGGGCAATTGATCCTGCACCTGCCATCAATGCGTATCGATCAGCCGGTGACACAGGCCCTGGGGCAG
TTGCAGTTCGTCAAGGCGCC

Downstream 100 bases:

>100_bases
GCGCTAAATAACAGTCCGGGATTGCTCAGCTAAACGGCTTTTGTAGGAGCGAACTTGTTCGCGAAGACGGTCGTTCAAAC
GATAAATTTCCAGAGAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Methyltransferase Type; Methyltransferase Protein; C12orf72 Protein

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MIAPQHLQHALSELLGDARLAVTALPGTELKLWLIDDVNMDRAFSPEETRRILEEPPYWSFCWASGLAPARFLAEKPHWV
AGKRVLDFGAGSGVAGIAALSAGALEVVACDLDPLALAACRANAELNQVSLRYSTDFFAEADRFDLILVADVLYDRANLP
LLDQFLSRGREALVADSRVRDFKHAAYQRLTMLHAHTLPDLAEPHEFRDVSLYHAAR

Sequences:

>Translated_217_residues
MIAPQHLQHALSELLGDARLAVTALPGTELKLWLIDDVNMDRAFSPEETRRILEEPPYWSFCWASGLAPARFLAEKPHWV
AGKRVLDFGAGSGVAGIAALSAGALEVVACDLDPLALAACRANAELNQVSLRYSTDFFAEADRFDLILVADVLYDRANLP
LLDQFLSRGREALVADSRVRDFKHAAYQRLTMLHAHTLPDLAEPHEFRDVSLYHAAR
>Mature_217_residues
MIAPQHLQHALSELLGDARLAVTALPGTELKLWLIDDVNMDRAFSPEETRRILEEPPYWSFCWASGLAPARFLAEKPHWV
AGKRVLDFGAGSGVAGIAALSAGALEVVACDLDPLALAACRANAELNQVSLRYSTDFFAEADRFDLILVADVLYDRANLP
LLDQFLSRGREALVADSRVRDFKHAAYQRLTMLHAHTLPDLAEPHEFRDVSLYHAAR

Specific function: Methylates Ribosomal Protein L11. [C]

COG id: COG3897

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209529731, Length=115, Percent_Identity=37.3913043478261, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI209529729, Length=115, Percent_Identity=37.3913043478261, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI28603834, Length=115, Percent_Identity=37.3913043478261, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI115533699, Length=133, Percent_Identity=31.5789473684211, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.- [C]

Molecular weight: Translated: 24031; Mature: 24031

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPQHLQHALSELLGDARLAVTALPGTELKLWLIDDVNMDRAFSPEETRRILEEPPYWS
CCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCC
FCWASGLAPARFLAEKPHWVAGKRVLDFGAGSGVAGIAALSAGALEVVACDLDPLALAAC
HHHHCCCCHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHH
RANAELNQVSLRYSTDFFAEADRFDLILVADVLYDRANLPLLDQFLSRGREALVADSRVR
HCCCCCCEEEEEECCCHHCCCCCCCEEEEHHHHHCCCCCCHHHHHHHCCCCEEHHHHHHH
DFKHAAYQRLTMLHAHTLPDLAEPHEFRDVSLYHAAR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEECCC
>Mature Secondary Structure
MIAPQHLQHALSELLGDARLAVTALPGTELKLWLIDDVNMDRAFSPEETRRILEEPPYWS
CCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCC
FCWASGLAPARFLAEKPHWVAGKRVLDFGAGSGVAGIAALSAGALEVVACDLDPLALAAC
HHHHCCCCHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHH
RANAELNQVSLRYSTDFFAEADRFDLILVADVLYDRANLPLLDQFLSRGREALVADSRVR
HCCCCCCEEEEEECCCHHCCCCCCCEEEEHHHHHCCCCCCHHHHHHHCCCCEEHHHHHHH
DFKHAAYQRLTMLHAHTLPDLAEPHEFRDVSLYHAAR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]

General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA