| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is bfr [C]
Identifier: 66047675
GI number: 66047675
Start: 5313367
End: 5313909
Strand: Direct
Name: bfr [C]
Synonym: Psyr_4448
Alternate gene names: 66047675
Gene position: 5313367-5313909 (Clockwise)
Preceding gene: 66047674
Following gene: 66047677
Centisome position: 87.19
GC content: 57.83
Gene sequence:
>543_bases ATGATGAATTCTGCACCGCAATCACAGCTTTCCGATGTAAATACTCTGCGCCAGCGCGCACGCCAGAACGTTGAGGATGG TGCTGTGACTCAAGGCTACAGCGCTGACCGCGAAACGGTCCTGCGCCTGCTCAATGAATCGCTGGCTACCGAGCTGGTCT GTGTGCTGCGCTACAAGCGCCACTACTACATGGCGTCGGGCCTCAAAGCGAGCGTCGCGGCAGCCGAGTTTCTGGAGCAC GCAGAACAGGAAGCGCAGCACGCTGACAAACTGGCCGAGCGTATCGTGCAACTGGGCGGCGAGCCGGAGTTCAACCCGGA CACCCTGTCGAAGAACTCCCACGCGCAGTACGTGGCTGGCAACACGCTGAAAGAAATGGTCTACGAAGATCTGGTTGCCG AGCGCATCGCCGTCGACAGCTACCGCGAAATCATTCAATACCTCGGCGACAACGATCCGACGACCCGCCGCATCTTCGAA GAAATCCTTGCTCAGGAAGAAGAGCACGCCGATGACATGGCAGACATTCTGAACGATCTGTAA
Upstream 100 bases:
>100_bases CGATAAAACTTTTTCCCTTCTCCAGCACTCACAACCCTTGCTGATCCTGCCGGGCAATACACAGAGCGAGACAGCAAAAC CTGATGAGTCCTGGAGATAA
Downstream 100 bases:
>100_bases CGCGCGGCAGCAAATGAAAAGCCAGGACCTGTGTCCTGGCTTTTTTGTGGGAGATATTGTCTCAAGCCAGATGCGTGAAC ATCGTTGCGCACGCTCCAGC
Product: Ferritin and Dps
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Bacterioferritin-Like Domain-Containing Protein; Rubrerythrin Family Protein; RubrerythrinFerritin And Dps
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MMNSAPQSQLSDVNTLRQRARQNVEDGAVTQGYSADRETVLRLLNESLATELVCVLRYKRHYYMASGLKASVAAAEFLEH AEQEAQHADKLAERIVQLGGEPEFNPDTLSKNSHAQYVAGNTLKEMVYEDLVAERIAVDSYREIIQYLGDNDPTTRRIFE EILAQEEEHADDMADILNDL
Sequences:
>Translated_180_residues MMNSAPQSQLSDVNTLRQRARQNVEDGAVTQGYSADRETVLRLLNESLATELVCVLRYKRHYYMASGLKASVAAAEFLEH AEQEAQHADKLAERIVQLGGEPEFNPDTLSKNSHAQYVAGNTLKEMVYEDLVAERIAVDSYREIIQYLGDNDPTTRRIFE EILAQEEEHADDMADILNDL >Mature_180_residues MMNSAPQSQLSDVNTLRQRARQNVEDGAVTQGYSADRETVLRLLNESLATELVCVLRYKRHYYMASGLKASVAAAEFLEH AEQEAQHADKLAERIVQLGGEPEFNPDTLSKNSHAQYVAGNTLKEMVYEDLVAERIAVDSYREIIQYLGDNDPTTRRIFE EILAQEEEHADDMADILNDL
Specific function: May Perform Analogous Functions In Iron Detoxification And Storage To That Of Animal Ferritins. [C]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20332; Mature: 20332
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNSAPQSQLSDVNTLRQRARQNVEDGAVTQGYSADRETVLRLLNESLATELVCVLRYKR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HYYMASGLKASVAAAEFLEHAEQEAQHADKLAERIVQLGGEPEFNPDTLSKNSHAQYVAG HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHH NTLKEMVYEDLVAERIAVDSYREIIQYLGDNDPTTRRIFEEILAQEEEHADDMADILNDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MMNSAPQSQLSDVNTLRQRARQNVEDGAVTQGYSADRETVLRLLNESLATELVCVLRYKR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HYYMASGLKASVAAAEFLEHAEQEAQHADKLAERIVQLGGEPEFNPDTLSKNSHAQYVAG HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHH NTLKEMVYEDLVAERIAVDSYREIIQYLGDNDPTTRRIFEEILAQEEEHADDMADILNDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA