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The map label for this gene is ureD2 [H]

Identifier: 66047658

GI number: 66047658

Start: 5299519

End: 5300364

Strand: Direct

Name: ureD2 [H]

Synonym: Psyr_4431

Alternate gene names: 66047658

Gene position: 5299519-5300364 (Clockwise)

Preceding gene: 66047657

Following gene: 66047659

Centisome position: 86.97

GC content: 64.42

Gene sequence:

>846_bases
ATGAACCTGCCTGCCAACACCGCCCTCTTCACCCCCAGCTGGCACGCCGAGCTGGAATTGGGTTACGGCCGTTTTGATGA
CAGCACACGCCCGACGCTGCGGCGCCACAAAGGACCGCTGCGCGTGCAAAAGCATCTGTACGCCGAAGGCCCGGAGGTGT
GCCAGCACATCATCGTTCATCCACCGGGCGGTATCGCCGGGGGAGACCGGCTGGATATCTCGGCCACCGTGGGTGCCGAT
GCCTGGGCACAGTTGACCAGCCCCGGCGCGGCAAAATGGTATCGCGCCGCCAGCCCGGCCTTTCAGCAACTGGAACTGCA
CGTCCAGCCCGGCGCGACACTGGAATGGCTGCCGCAGGAAAGCATTGTCTTCAGCAACGCCCAGGCAGAACTGAGCACCC
GCATAGAGCTGCACGGTGATGCGAAGCTATGCTACTGGGATGTGGTGGCGCTGGGCCGGCCGGCCAGTGGCGAGCGGTTC
GAGCACGGGCATTTTCAATCGCATCTGGATATCCGTCGCGACGGCACATTGCTCTGGCATGAGCGACAACGCATTATCGG
TGGCGACGGGCTGCTGGACTCGCCCATCGGCCTGGACGGCAGAACGGTGTTCGCCACCCTGCTGATGACCGGCGAAGTCG
GCAGCGAGCTGCTCGAGGCCTGCCGTTCGCTGTCGATGCCCAACCCGGTACGCGGCGATCTGACGCAACTGCCCGGCCTG
CTGGTCGCTCGCTGCCTGGCAGACGAAGCACTGCACGCACGTGCCTGGCTGATACAAATCTGGAAATGCCTGCGCCCTGC
CCTGCTGGGACGCGAGGCGGTAACGCCAAGAATCTGGAACACCTGA

Upstream 100 bases:

>100_bases
CCGTGGCGAGAACATGGAGAGCGACGGCGTTCGTGGTCTGGTGACCATTTGATGCGTCAATCCGTTATCGTGCAGCACTC
GACAAGCCAATGAAGACACC

Downstream 100 bases:

>100_bases
TTGATGACTGGACGCTCTACATTCCATGCTACACCGTCAGCGCTGATGCACTCAGCGTGATACATAAGTCCTGAAAAGCC
CGAAAATCGGGGCTTTTAGC

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNLPANTALFTPSWHAELELGYGRFDDSTRPTLRRHKGPLRVQKHLYAEGPEVCQHIIVHPPGGIAGGDRLDISATVGAD
AWAQLTSPGAAKWYRAASPAFQQLELHVQPGATLEWLPQESIVFSNAQAELSTRIELHGDAKLCYWDVVALGRPASGERF
EHGHFQSHLDIRRDGTLLWHERQRIIGGDGLLDSPIGLDGRTVFATLLMTGEVGSELLEACRSLSMPNPVRGDLTQLPGL
LVARCLADEALHARAWLIQIWKCLRPALLGREAVTPRIWNT

Sequences:

>Translated_281_residues
MNLPANTALFTPSWHAELELGYGRFDDSTRPTLRRHKGPLRVQKHLYAEGPEVCQHIIVHPPGGIAGGDRLDISATVGAD
AWAQLTSPGAAKWYRAASPAFQQLELHVQPGATLEWLPQESIVFSNAQAELSTRIELHGDAKLCYWDVVALGRPASGERF
EHGHFQSHLDIRRDGTLLWHERQRIIGGDGLLDSPIGLDGRTVFATLLMTGEVGSELLEACRSLSMPNPVRGDLTQLPGL
LVARCLADEALHARAWLIQIWKCLRPALLGREAVTPRIWNT
>Mature_281_residues
MNLPANTALFTPSWHAELELGYGRFDDSTRPTLRRHKGPLRVQKHLYAEGPEVCQHIIVHPPGGIAGGDRLDISATVGAD
AWAQLTSPGAAKWYRAASPAFQQLELHVQPGATLEWLPQESIVFSNAQAELSTRIELHGDAKLCYWDVVALGRPASGERF
EHGHFQSHLDIRRDGTLLWHERQRIIGGDGLLDSPIGLDGRTVFATLLMTGEVGSELLEACRSLSMPNPVRGDLTQLPGL
LVARCLADEALHARAWLIQIWKCLRPALLGREAVTPRIWNT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 31012; Mature: 31012

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPANTALFTPSWHAELELGYGRFDDSTRPTLRRHKGPLRVQKHLYAEGPEVCQHIIVH
CCCCCCCEEECCCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHEEEEE
PPGGIAGGDRLDISATVGADAWAQLTSPGAAKWYRAASPAFQQLELHVQPGATLEWLPQE
CCCCCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCCCCEEECCCC
SIVFSNAQAELSTRIELHGDAKLCYWDVVALGRPASGERFEHGHFQSHLDIRRDGTLLWH
CEEECCCCCCEEEEEEECCCCEEEEEEHHHCCCCCCCCCCCCCCCHHCCEECCCCEEEEE
ERQRIIGGDGLLDSPIGLDGRTVFATLLMTGEVGSELLEACRSLSMPNPVRGDLTQLPGL
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LVARCLADEALHARAWLIQIWKCLRPALLGREAVTPRIWNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC
>Mature Secondary Structure
MNLPANTALFTPSWHAELELGYGRFDDSTRPTLRRHKGPLRVQKHLYAEGPEVCQHIIVH
CCCCCCCEEECCCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHEEEEE
PPGGIAGGDRLDISATVGADAWAQLTSPGAAKWYRAASPAFQQLELHVQPGATLEWLPQE
CCCCCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCCCCEEECCCC
SIVFSNAQAELSTRIELHGDAKLCYWDVVALGRPASGERFEHGHFQSHLDIRRDGTLLWH
CEEECCCCCCEEEEEEECCCCEEEEEEHHHCCCCCCCCCCCCCCCHHCCEECCCCEEEEE
ERQRIIGGDGLLDSPIGLDGRTVFATLLMTGEVGSELLEACRSLSMPNPVRGDLTQLPGL
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LVARCLADEALHARAWLIQIWKCLRPALLGREAVTPRIWNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]