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The map label for this gene is amiC [H]

Identifier: 66047653

GI number: 66047653

Start: 5293554

End: 5294819

Strand: Direct

Name: amiC [H]

Synonym: Psyr_4426

Alternate gene names: 66047653

Gene position: 5293554-5294819 (Clockwise)

Preceding gene: 66047652

Following gene: 66047654

Centisome position: 86.87

GC content: 58.93

Gene sequence:

>1266_bases
ATGAAGCGTCGCAGCCTGATCAAAGCCTTTACCCTTTCCGCATCCATCGCCGCCATGGGGCTGACCTGGACCGTTCAGGC
TGCCGAGACCATCAAGGTCGGCATTCTGCATTCGTTGTCCGGCACCATGGCCATCTCCGAGACGTCGCTCAAGGACATGG
CCTTGATGACCATCGACGAGATCAACGCCAAAGGCGGCGTCAACGGCAAGATGCTGGAGCCGGTCGTTGTGGACCCGGCG
TCCAACTGGCCGCTGTTCGCGGAAAAAGGCCGTCAGTTGCTGACCCAGGACAAGGTCGCCGTGGTGTTCGGCTGCTGGAC
ATCGGTGTCGCGCAAATCGGTACTGCCGGTCTTCGAAGAACTCAACGGCCTGCTGTTCTACCCGGTGCAGTACGAAGGCG
AAGAAATGTCGCCCAATGTTTTCTACACCGGCGCCGCGCCTAACCAACAGGCTATCCCGGCCGTCGACTATGTCATGAGT
GAAGATGGCGGCGCTGCCAAGCGCTTCTTCCTGCTTGGCACCGACTATGTCTACCCGCGCACCACCAACAAGATTCTGCG
CGCATTCCTGCATTCCAAAGGCGTGAAAGATACCGATATCGAAGAGGTTTACACGCCGTTCGGTCACTCCGATTATCAAA
CCATCGTGGCCAACATCAAGAAGTTCTCCGCGGGTGGCAAGACGGCCGTTATCTCCACCGTCAACGGCGACTCCAACGTG
CCGTTCTACAAGGAACTGGCCAACCAGGGCCTGAACGCTACCGACGTACCGGTTGTGGCCTTCTCGGTAGGCGAAGAAGA
ACTGCGCGGCATCGACACCAAGCCATTGGTAGGCCATCTGGCCGCCTGGAACTACTTCCAGTCGGTGGAAAACCCGGTCA
ACAAGAAGTTCGTGGCTGACTGGAAAGCCTACGCCAAAAAGAAAAACCTGCCAGGCGCTGACAAGGCCGTGACCAACGAC
CCGATGGAAGCCACCTACGTCGGCATTCACATGTGGGCGCAGGCGGTCGAGAAAGCCAAATCCACCGACGTGGACAAGGT
CCGTGAAGCCATGGCCGGCCAGACGTTCGCAGCGCCGTCGGGCTTTACCCTGACCATGGACAAGACCAACCACCACTTGC
ACAAGCCAGTGATGATCGGCGAAATCCAGGACGACGGTCAGTTCAACGTCGTCTGGCAGACCAAAGAGCCGATCCGCGCC
CAGCCATGGAGCCCGTACATCCCTGGCAACGACAAGAAGCCGGACGCCCCGGCGAAGAGCAACTGA

Upstream 100 bases:

>100_bases
CCGCGACGTTACTGCGTTGGCCCAGACCTTGCTAAAGCCTGAAAGAGCAACGAAATGCACCGCCGCCAAACCTCAAACAA
TGTACTAAGGGAGCCAGTCA

Downstream 100 bases:

>100_bases
CGGATCAACGCTGCTTGATCGTTCCCACGCTCCAGCGCCAAGCGTTATACACAAGTCCTGAAGCCCGCGAAGTCCGGGGT
TTCAAAGCTTCTGCCCACAG

Product: branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKRRSLIKAFTLSASIAAMGLTWTVQAAETIKVGILHSLSGTMAISETSLKDMALMTIDEINAKGGVNGKMLEPVVVDPA
SNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVDYVMS
EDGGAAKRFFLLGTDYVYPRTTNKILRAFLHSKGVKDTDIEEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTVNGDSNV
PFYKELANQGLNATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFQSVENPVNKKFVADWKAYAKKKNLPGADKAVTND
PMEATYVGIHMWAQAVEKAKSTDVDKVREAMAGQTFAAPSGFTLTMDKTNHHLHKPVMIGEIQDDGQFNVVWQTKEPIRA
QPWSPYIPGNDKKPDAPAKSN

Sequences:

>Translated_421_residues
MKRRSLIKAFTLSASIAAMGLTWTVQAAETIKVGILHSLSGTMAISETSLKDMALMTIDEINAKGGVNGKMLEPVVVDPA
SNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVDYVMS
EDGGAAKRFFLLGTDYVYPRTTNKILRAFLHSKGVKDTDIEEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTVNGDSNV
PFYKELANQGLNATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFQSVENPVNKKFVADWKAYAKKKNLPGADKAVTND
PMEATYVGIHMWAQAVEKAKSTDVDKVREAMAGQTFAAPSGFTLTMDKTNHHLHKPVMIGEIQDDGQFNVVWQTKEPIRA
QPWSPYIPGNDKKPDAPAKSN
>Mature_421_residues
MKRRSLIKAFTLSASIAAMGLTWTVQAAETIKVGILHSLSGTMAISETSLKDMALMTIDEINAKGGVNGKMLEPVVVDPA
SNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVDYVMS
EDGGAAKRFFLLGTDYVYPRTTNKILRAFLHSKGVKDTDIEEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTVNGDSNV
PFYKELANQGLNATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFQSVENPVNKKFVADWKAYAKKKNLPGADKAVTND
PMEATYVGIHMWAQAVEKAKSTDVDKVREAMAGQTFAAPSGFTLTMDKTNHHLHKPVMIGEIQDDGQFNVVWQTKEPIRA
QPWSPYIPGNDKKPDAPAKSN

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46130; Mature: 46130

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSLIKAFTLSASIAAMGLTWTVQAAETIKVGILHSLSGTMAISETSLKDMALMTIDE
CCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEEECCCCCEEEECCCHHHEEEEEHHH
INAKGGVNGKMLEPVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEE
CCCCCCCCCCEECCEEECCCCCCCCHHHHCHHHHHCCCEEEEEEECHHCCCHHHHHHHHH
LNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVDYVMSEDGGAAKRFFLLGTDYVYPR
CCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHEECCCCCCEEEEEEEECCEECCC
TTNKILRAFLHSKGVKDTDIEEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTVNGDSNV
CHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PFYKELANQGLNATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFQSVENPVNKKFVAD
CHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
WKAYAKKKNLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREAMAGQTFAAPS
HHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
GFTLTMDKTNHHLHKPVMIGEIQDDGQFNVVWQTKEPIRAQPWSPYIPGNDKKPDAPAKS
CCEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
N
C
>Mature Secondary Structure
MKRRSLIKAFTLSASIAAMGLTWTVQAAETIKVGILHSLSGTMAISETSLKDMALMTIDE
CCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEEECCCCCEEEECCCHHHEEEEEHHH
INAKGGVNGKMLEPVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEE
CCCCCCCCCCEECCEEECCCCCCCCHHHHCHHHHHCCCEEEEEEECHHCCCHHHHHHHHH
LNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVDYVMSEDGGAAKRFFLLGTDYVYPR
CCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHEECCCCCCEEEEEEEECCEECCC
TTNKILRAFLHSKGVKDTDIEEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTVNGDSNV
CHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PFYKELANQGLNATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFQSVENPVNKKFVAD
CHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
WKAYAKKKNLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREAMAGQTFAAPS
HHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
GFTLTMDKTNHHLHKPVMIGEIQDDGQFNVVWQTKEPIRAQPWSPYIPGNDKKPDAPAKS
CCEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]