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The map label for this gene is yqhA [C]

Identifier: 66047484

GI number: 66047484

Start: 5074073

End: 5074561

Strand: Reverse

Name: yqhA [C]

Synonym: Psyr_4257

Alternate gene names: 66047484

Gene position: 5074561-5074073 (Counterclockwise)

Preceding gene: 66047485

Following gene: 66047483

Centisome position: 83.28

GC content: 51.33

Gene sequence:

>489_bases
ATGGAACGTTTTTTTGAAAATGCCATGTACGCATCGCGCTGGCTGCTGGCGCCGATCTATTTCGGCCTCTCCCTTGGTCT
GTTGGCGTTGTGTCTGAAGTTTTTCCAGGAAATCTTTCACGTCATTCCCAACATCTTCTCGCTGGCCGAAGCTGACCTGA
TTCTGGTGTTGTTGTCGCTGATCGACATGGCGCTGGTCGGTGGCTTGCTGGTGATGGTGATGATCTCCGGCTACGAGAAC
TTCGTATCGCAACTGGACATCGATGAGGACAAGGAAAAGCTCAACTGGCTGGGCACTATGGATTCGTCTTCGCTGAAGAT
GAAAGTTGCAGCATCGATTGTCGCGATTTCTTCCATCCACCTGTTGCGGGTGTTCATGGACGCCACCAACATCAAGCCCG
AATACCTGATGTGGTACGTGATTATCCACATGACGTTCGTGATATCGGCGTTTGCGATGGGCTATCTGGACAAGGTCACC
AAGCACTGA

Upstream 100 bases:

>100_bases
GTGCGCTAACTGCCGCTGTGCGATATTTTGTCGCACGCTCAGAGCGGCGCATTACCGCTGATATACTCGCCCGCTCTTTT
AAAACACCTTGCGAGTATCA

Downstream 100 bases:

>100_bases
AACGACATGGAATGACAGGGGCGGGCGTTATCGTTTCTGGCATGTCGACGCTGTGTGTTGTAAAACGTCCGTTCCGATGC
ATCAGGCATTTGCGCAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MERFFENAMYASRWLLAPIYFGLSLGLLALCLKFFQEIFHVIPNIFSLAEADLILVLLSLIDMALVGGLLVMVMISGYEN
FVSQLDIDEDKEKLNWLGTMDSSSLKMKVAASIVAISSIHLLRVFMDATNIKPEYLMWYVIIHMTFVISAFAMGYLDKVT
KH

Sequences:

>Translated_162_residues
MERFFENAMYASRWLLAPIYFGLSLGLLALCLKFFQEIFHVIPNIFSLAEADLILVLLSLIDMALVGGLLVMVMISGYEN
FVSQLDIDEDKEKLNWLGTMDSSSLKMKVAASIVAISSIHLLRVFMDATNIKPEYLMWYVIIHMTFVISAFAMGYLDKVT
KH
>Mature_162_residues
MERFFENAMYASRWLLAPIYFGLSLGLLALCLKFFQEIFHVIPNIFSLAEADLILVLLSLIDMALVGGLLVMVMISGYEN
FVSQLDIDEDKEKLNWLGTMDSSSLKMKVAASIVAISSIHLLRVFMDATNIKPEYLMWYVIIHMTFVISAFAMGYLDKVT
KH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family

Homologues:

Organism=Escherichia coli, GI1789376, Length=162, Percent_Identity=81.4814814814815, Blast_Score=260, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4257_PSEU2 (Q4ZNI5)

Other databases:

- EMBL:   CP000075
- RefSeq:   YP_237325.1
- STRING:   Q4ZNI5
- GeneID:   3369797
- GenomeReviews:   CP000075_GR
- KEGG:   psb:Psyr_4257
- NMPDR:   fig|205918.4.peg.4692
- eggNOG:   COG2862
- HOGENOM:   HBG474035
- OMA:   MVIIGGY
- ProtClustDB:   PRK05208
- BioCyc:   PSYR205918:PSYR_4257-MONOMER
- HAMAP:   MF_00143
- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765
- TIGRFAMs:   TIGR00645

Pfam domain/function: PF03350 UPF0114

EC number: NA

Molecular weight: Translated: 18411; Mature: 18411

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a41626c)-; HASH(0x1a43bc4c)-; HASH(0x1aea7020)-; HASH(0x1a44d0ac)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFFENAMYASRWLLAPIYFGLSLGLLALCLKFFQEIFHVIPNIFSLAEADLILVLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDMALVGGLLVMVMISGYENFVSQLDIDEDKEKLNWLGTMDSSSLKMKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLRVFMDATNIKPEYLMWYVIIHMTFVISAFAMGYLDKVTKH
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MERFFENAMYASRWLLAPIYFGLSLGLLALCLKFFQEIFHVIPNIFSLAEADLILVLLSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDMALVGGLLVMVMISGYENFVSQLDIDEDKEKLNWLGTMDSSSLKMKVAASIVAISSIH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLRVFMDATNIKPEYLMWYVIIHMTFVISAFAMGYLDKVTKH
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA