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The map label for this gene is adrA [H]

Identifier: 66047433

GI number: 66047433

Start: 5008801

End: 5009886

Strand: Direct

Name: adrA [H]

Synonym: Psyr_4206

Alternate gene names: 66047433

Gene position: 5008801-5009886 (Clockwise)

Preceding gene: 66047431

Following gene: 66047435

Centisome position: 82.2

GC content: 52.3

Gene sequence:

>1086_bases
GTGCCGCAAAGAAGAAACCTGAAAAACTCTATTTTCGTACCCTTGAAGCTGTCTCAATTGATCGGTCTTTTCAGTTGGGT
TATCAGCTGGTGTCTGAATCCGTCTATTGATCGATCACTGGATATATTCATCTGCTGCGCGCTGGCGGGGGCGGCGCTGT
CGATCATTGTCACGTCCAATAGCAGGAGCATGCTGGCGTGGCGCCTGTTCGGCATCATTTACATGGCATCACTGACCTTT
CTGTTCAATGAACAGATCGACCGCATGGGCGAGGAAGCGTCGATGTGGGGGCTGGTTGTCACCTCCCTGCTCATCACGGG
AATGAGCGTATTCTTCGTCAAGTTTATTGATTACATCGCCGCGGCTGCGCTGATCTGGTTGATCATGTGGCAAACGGACC
TGACGGCCGTCGGCGTCGACCATGTACCTCTGTTTTATGTGTTCCTGATCAGCTCGACGTTACTGGGCGGCTGCCTGAAT
GCAACCTTCCTGAGCCTTATCATGCAGACCATGGCAGCCAGGGACCGTTATCAGGAACTGTCCGAAACCGACACCCTGAC
GCACGCCCCCAACCGTCGTGCACTGGTTGCCGGTCTGAATACCGCGCTGGCATCTGCTGATAAATCGTCGTTGTGGTTTG
CCATGCTTGATCTGGATCACTTTAAAAGTATCAACGACACCCATGGTCACGACGTGGGTGACAATGTTCTTATCAGTTTT
GCAACACTGCTGAAAAGCACAAAGGGGCTCATCAGCTTCGGTCGTTTGGGTGGGGAAGAGTTTGGCGTGATCTTATCGGC
GGCGAACGCCACAGACGCTATACATGCACTGGAAGGGTTATTGATGCTCGCGCAACATGATGACGCGGCTCAAGTGCCCT
ATTCATTCAGTGGCGGTGTGGCGAGTTTGTCGCGGGTTGAGACGATCAATGACCTGTTGAAAGAGGCCGATGAGAACCTG
TATTACGCCAAGCGCAGTGGCAGAATATGTATCGCCTTTGAAGGCAGGATAGTTTCATCGAACGCTGTCAGCACGACAAA
GCACAATCAAGCGACACAATCAGTTGAAAAGCCTACGCATGCCTAG

Upstream 100 bases:

>100_bases
ATCTGACAATCACGTATAGTGGCCATATATCATCACCCTGTTCGACCAAGGCGTGTGCCGTCGATAACGGTTCGGCTGGC
ATCAGTATGGAAAACTGCAC

Downstream 100 bases:

>100_bases
CGCCCGTTTTCCCCTTCAAACATTCCCGCCCCGCCGCACCTTCGAATACCGATCGATATCCTCCCGCAATGTCCATCCCT
GCCCCTGCCAATAACGTCCG

Product: GGDEF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MPQRRNLKNSIFVPLKLSQLIGLFSWVISWCLNPSIDRSLDIFICCALAGAALSIIVTSNSRSMLAWRLFGIIYMASLTF
LFNEQIDRMGEEASMWGLVVTSLLITGMSVFFVKFIDYIAAAALIWLIMWQTDLTAVGVDHVPLFYVFLISSTLLGGCLN
ATFLSLIMQTMAARDRYQELSETDTLTHAPNRRALVAGLNTALASADKSSLWFAMLDLDHFKSINDTHGHDVGDNVLISF
ATLLKSTKGLISFGRLGGEEFGVILSAANATDAIHALEGLLMLAQHDDAAQVPYSFSGGVASLSRVETINDLLKEADENL
YYAKRSGRICIAFEGRIVSSNAVSTTKHNQATQSVEKPTHA

Sequences:

>Translated_361_residues
MPQRRNLKNSIFVPLKLSQLIGLFSWVISWCLNPSIDRSLDIFICCALAGAALSIIVTSNSRSMLAWRLFGIIYMASLTF
LFNEQIDRMGEEASMWGLVVTSLLITGMSVFFVKFIDYIAAAALIWLIMWQTDLTAVGVDHVPLFYVFLISSTLLGGCLN
ATFLSLIMQTMAARDRYQELSETDTLTHAPNRRALVAGLNTALASADKSSLWFAMLDLDHFKSINDTHGHDVGDNVLISF
ATLLKSTKGLISFGRLGGEEFGVILSAANATDAIHALEGLLMLAQHDDAAQVPYSFSGGVASLSRVETINDLLKEADENL
YYAKRSGRICIAFEGRIVSSNAVSTTKHNQATQSVEKPTHA
>Mature_360_residues
PQRRNLKNSIFVPLKLSQLIGLFSWVISWCLNPSIDRSLDIFICCALAGAALSIIVTSNSRSMLAWRLFGIIYMASLTFL
FNEQIDRMGEEASMWGLVVTSLLITGMSVFFVKFIDYIAAAALIWLIMWQTDLTAVGVDHVPLFYVFLISSTLLGGCLNA
TFLSLIMQTMAARDRYQELSETDTLTHAPNRRALVAGLNTALASADKSSLWFAMLDLDHFKSINDTHGHDVGDNVLISFA
TLLKSTKGLISFGRLGGEEFGVILSAANATDAIHALEGLLMLAQHDDAAQVPYSFSGGVASLSRVETINDLLKEADENLY
YAKRSGRICIAFEGRIVSSNAVSTTKHNQATQSVEKPTHA

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=163, Percent_Identity=38.6503067484663, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787816, Length=153, Percent_Identity=33.9869281045752, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787262, Length=160, Percent_Identity=32.5, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1787802, Length=166, Percent_Identity=32.5301204819277, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1787056, Length=155, Percent_Identity=32.258064516129, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081974, Length=156, Percent_Identity=32.6923076923077, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082007, Length=155, Percent_Identity=36.7741935483871, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI145693134, Length=198, Percent_Identity=28.7878787878788, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI87081881, Length=169, Percent_Identity=33.1360946745562, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787541, Length=189, Percent_Identity=30.1587301587302, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788956, Length=150, Percent_Identity=36, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081977, Length=95, Percent_Identity=44.2105263157895, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 39541; Mature: 39410

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRRNLKNSIFVPLKLSQLIGLFSWVISWCLNPSIDRSLDIFICCALAGAALSIIVTSN
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEEEEECC
SRSMLAWRLFGIIYMASLTFLFNEQIDRMGEEASMWGLVVTSLLITGMSVFFVKFIDYIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALIWLIMWQTDLTAVGVDHVPLFYVFLISSTLLGGCLNATFLSLIMQTMAARDRYQEL
HHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SETDTLTHAPNRRALVAGLNTALASADKSSLWFAMLDLDHFKSINDTHGHDVGDNVLISF
HHHCCCCCCCCCCEEEHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHH
ATLLKSTKGLISFGRLGGEEFGVILSAANATDAIHALEGLLMLAQHDDAAQVPYSFSGGV
HHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
ASLSRVETINDLLKEADENLYYAKRSGRICIAFEGRIVSSNAVSTTKHNQATQSVEKPTH
HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCEEEECCCCCCCCCHHHHHHHCCCCC
A
C
>Mature Secondary Structure 
PQRRNLKNSIFVPLKLSQLIGLFSWVISWCLNPSIDRSLDIFICCALAGAALSIIVTSN
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEEEEECC
SRSMLAWRLFGIIYMASLTFLFNEQIDRMGEEASMWGLVVTSLLITGMSVFFVKFIDYIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALIWLIMWQTDLTAVGVDHVPLFYVFLISSTLLGGCLNATFLSLIMQTMAARDRYQEL
HHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SETDTLTHAPNRRALVAGLNTALASADKSSLWFAMLDLDHFKSINDTHGHDVGDNVLISF
HHHCCCCCCCCCCEEEHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHH
ATLLKSTKGLISFGRLGGEEFGVILSAANATDAIHALEGLLMLAQHDDAAQVPYSFSGGV
HHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
ASLSRVETINDLLKEADENLYYAKRSGRICIAFEGRIVSSNAVSTTKHNQATQSVEKPTH
HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCEEEECCCCCCCCCHHHHHHHCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]