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The map label for this gene is 66047354

Identifier: 66047354

GI number: 66047354

Start: 4916835

End: 4917176

Strand: Reverse

Name: 66047354

Synonym: Psyr_4127

Alternate gene names: NA

Gene position: 4917176-4916835 (Counterclockwise)

Preceding gene: 66047355

Following gene: 66047353

Centisome position: 80.69

GC content: 50.88

Gene sequence:

>342_bases
ATGGACTTCGAGAGACTCTTGGTATGGCAAAGAGCAAAGGCGCTGGCGGTCATTCTCTACAGGCAAACGGCGTCTTGCCC
CGATCTGGCTTTCAGAAGCCAGATCACACGCTCTGGTTTGTCGGTACCAAGCAATATTGCTGAGGGCATGGAGCGATTCA
CTGCCAAGGACAAATGTCGCTTTTTGTATATTGCGAAAGCCTCGTGCGGCGAGCTGAGAACTCAGCTCATGATCGGCAGT
GAAATCGGTTATATCCCTGAGGCCGTTGCAGCAGCATTGATTACTGAAACCCGCGAGCTCTCGAAAATGCTGTGCGGGCT
GATCAACAAAATTTCTGAATAG

Upstream 100 bases:

>100_bases
GCTGGTTCGATGGAAGAAAAGAAACGTCAGGGTTATTTCTAAGGAGCAGCTTTTAGCTTCAAGCGGCAAGCTACAAGAAA
ATTAAAAGCAGGGGATCGAA

Downstream 100 bases:

>100_bases
CTGTACGCCGACAAGCTTGCCGCTTGAAGCTTACAGCTTGGAGCTCAACCGCTATGAGTCACCAATCTGATTTGATCAGC
GAGGACATCCTCGCCTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: 23S Ribosomal Protein; 30S Ribosomal Protein S; 23S Ribosomal RNA Protein; Glutamine-Scyllo-Inositol Transaminase; S23 Ribosomal; Intervening Sequence

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MDFERLLVWQRAKALAVILYRQTASCPDLAFRSQITRSGLSVPSNIAEGMERFTAKDKCRFLYIAKASCGELRTQLMIGS
EIGYIPEAVAAALITETRELSKMLCGLINKISE

Sequences:

>Translated_113_residues
MDFERLLVWQRAKALAVILYRQTASCPDLAFRSQITRSGLSVPSNIAEGMERFTAKDKCRFLYIAKASCGELRTQLMIGS
EIGYIPEAVAAALITETRELSKMLCGLINKISE
>Mature_113_residues
MDFERLLVWQRAKALAVILYRQTASCPDLAFRSQITRSGLSVPSNIAEGMERFTAKDKCRFLYIAKASCGELRTQLMIGS
EIGYIPEAVAAALITETRELSKMLCGLINKISE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12590; Mature: 12590

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFERLLVWQRAKALAVILYRQTASCPDLAFRSQITRSGLSVPSNIAEGMERFTAKDKCR
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCE
FLYIAKASCGELRTQLMIGSEIGYIPEAVAAALITETRELSKMLCGLINKISE
EEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFERLLVWQRAKALAVILYRQTASCPDLAFRSQITRSGLSVPSNIAEGMERFTAKDKCR
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCE
FLYIAKASCGELRTQLMIGSEIGYIPEAVAAALITETRELSKMLCGLINKISE
EEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA