| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047311
Identifier: 66047311
GI number: 66047311
Start: 4869754
End: 4871292
Strand: Direct
Name: 66047311
Synonym: Psyr_4084
Alternate gene names: NA
Gene position: 4869754-4871292 (Clockwise)
Preceding gene: 66047310
Following gene: 66047312
Centisome position: 79.91
GC content: 52.89
Gene sequence:
>1539_bases ATGGAGTTTCGTGACATACACTCAGTGACACGCTGGGGCATTGCCGCTATTTTTGGCACTGTACTGCTGACCTATAGTGG TCACTGGTGGGGCAAGGCCATTGCTCATGAAAAAGCTGAACTAATAGCTTATAAATCCAAAGTCGCAGAGCAAGTATTAG AGCAGCAGGCGACTCAGAAGCGAAACTACGCCCTGGAAATTCGGGGATTAGGTATCGCTATCAATGACTGGCATCAATCG TCTATTTGGCGAGAAATAGTTAAGAAAAACAGTAACCTTGCCTCAATATACTCATCAAGACCAGAAGATTATGATTCTGA CTTGAGTTCACGCGAGATTACTAGAGATATTAATATACGTGTAGCCTTTCAACATTCTGCGGGAGAGTCAGTTGCATATT GGCCAACACCTACTTTTGCGTTAGGCCCTCCAAACCCATATGAAAAGCCCTACAAAGCGGCAGGCTTGATCAATTCTGGA CGTAACAAAGCGACCTTGGGTGTAGCACAATTTTTATGGCAAGAAGATGAGAGCACTAGTCAAGCGCAGGCTATGATCGA AAAGCTTTATCACTTCTTTGACGGTAACCCGCAGGTGCCTCAAGCACTAATAGCAAGCCGGGACGGCGATGTAACGAGAG CTGTTTATCGCAAACGCGGTACGCCCGGCCTCCAAAGCGCTCAAGTCGTACCGACTGTTTTCGAAAGCATGACTGGACTC TTGGTCACCCGTTCGGATCGCGTAGATCGCTTTATCAGACCCTACGCGGTCAATGAGGCAGAAGACAACCAAAACAAAAA TACTGACTTGGGTAAGCTCTGGGCATTCTACTGGGATCGCGACAACGCGTTCATAGACTGGTACGAAAATGCCGAGAAAG CCAAAGGAGTTAAAGATCCATTAGCCCCCGGCACCATGTCCACCGCCTACTGGCAATCCCAACTCCCCACCCTCTGGAAA ACCATCAGCAACCGTGGTCCCGGCAACTTCGAGCCTTCCCCTTGGCTGCCGATCCGCTGGAATCAGCATCAGGTCAAGGA GTTCGACGCTGCGCCGGTACTCGGCTATCTGCATCGCCCGATCAAGGCGCCCATGCAGGATGAAAACGGCAAGCGTCTGA AACCGGCCTTGCAAGCCAAAGCGTTGCAAGCCGCCTGGGTGCAGGCGCTGGATACCTTGCCAGATGGTCAGAAACCTGTG CGGGTGTTCTACGACAGCACCAACAACCCGGAAGCGGAAATCGCCCTGAACAACGCCCTGCACGACCTGAACAAGGACGG CCACGGTCTTGAGCTCGGCAATGTCGAAGAAGGCTACGACATCGGCCGTCGTCTGGGGAATACCGGAGTTAGTGGTGCGC TGGTCGAGATCAATCTGGCGACCATCGCCAGTTACAAGGATGGCGGCGTCAGCGCCGTGGTCTACGCCGGCACCGATGGC AGCCTGACCGTACAAATGGTCCGCCCGCCCGATGAAGCCCGCAAAGCGAAGAACAGCCAGAACCGCGGCGCAGATCCGTT CACCTTCGGCTCGCCTTAG
Upstream 100 bases:
>100_bases GTGCGGCTGTCAGGGTGTGGCCAGCCATGCCATGAATGTGCGAGTGGTTTAGGGGTTTTATTTGTGATCAGGCTATGCAA TGGAAGCACAGGAAAACGAT
Downstream 100 bases:
>100_bases CCGTCACTAAACACTCTCAATCGTAAACAAGGAAGAAAATATGTATGCGCATTTTTGTAGGGCCTTTGTAGGGATAAATT TAGTCGCGGCATTGATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MEFRDIHSVTRWGIAAIFGTVLLTYSGHWWGKAIAHEKAELIAYKSKVAEQVLEQQATQKRNYALEIRGLGIAINDWHQS SIWREIVKKNSNLASIYSSRPEDYDSDLSSREITRDINIRVAFQHSAGESVAYWPTPTFALGPPNPYEKPYKAAGLINSG RNKATLGVAQFLWQEDESTSQAQAMIEKLYHFFDGNPQVPQALIASRDGDVTRAVYRKRGTPGLQSAQVVPTVFESMTGL LVTRSDRVDRFIRPYAVNEAEDNQNKNTDLGKLWAFYWDRDNAFIDWYENAEKAKGVKDPLAPGTMSTAYWQSQLPTLWK TISNRGPGNFEPSPWLPIRWNQHQVKEFDAAPVLGYLHRPIKAPMQDENGKRLKPALQAKALQAAWVQALDTLPDGQKPV RVFYDSTNNPEAEIALNNALHDLNKDGHGLELGNVEEGYDIGRRLGNTGVSGALVEINLATIASYKDGGVSAVVYAGTDG SLTVQMVRPPDEARKAKNSQNRGADPFTFGSP
Sequences:
>Translated_512_residues MEFRDIHSVTRWGIAAIFGTVLLTYSGHWWGKAIAHEKAELIAYKSKVAEQVLEQQATQKRNYALEIRGLGIAINDWHQS SIWREIVKKNSNLASIYSSRPEDYDSDLSSREITRDINIRVAFQHSAGESVAYWPTPTFALGPPNPYEKPYKAAGLINSG RNKATLGVAQFLWQEDESTSQAQAMIEKLYHFFDGNPQVPQALIASRDGDVTRAVYRKRGTPGLQSAQVVPTVFESMTGL LVTRSDRVDRFIRPYAVNEAEDNQNKNTDLGKLWAFYWDRDNAFIDWYENAEKAKGVKDPLAPGTMSTAYWQSQLPTLWK TISNRGPGNFEPSPWLPIRWNQHQVKEFDAAPVLGYLHRPIKAPMQDENGKRLKPALQAKALQAAWVQALDTLPDGQKPV RVFYDSTNNPEAEIALNNALHDLNKDGHGLELGNVEEGYDIGRRLGNTGVSGALVEINLATIASYKDGGVSAVVYAGTDG SLTVQMVRPPDEARKAKNSQNRGADPFTFGSP >Mature_512_residues MEFRDIHSVTRWGIAAIFGTVLLTYSGHWWGKAIAHEKAELIAYKSKVAEQVLEQQATQKRNYALEIRGLGIAINDWHQS SIWREIVKKNSNLASIYSSRPEDYDSDLSSREITRDINIRVAFQHSAGESVAYWPTPTFALGPPNPYEKPYKAAGLINSG RNKATLGVAQFLWQEDESTSQAQAMIEKLYHFFDGNPQVPQALIASRDGDVTRAVYRKRGTPGLQSAQVVPTVFESMTGL LVTRSDRVDRFIRPYAVNEAEDNQNKNTDLGKLWAFYWDRDNAFIDWYENAEKAKGVKDPLAPGTMSTAYWQSQLPTLWK TISNRGPGNFEPSPWLPIRWNQHQVKEFDAAPVLGYLHRPIKAPMQDENGKRLKPALQAKALQAAWVQALDTLPDGQKPV RVFYDSTNNPEAEIALNNALHDLNKDGHGLELGNVEEGYDIGRRLGNTGVSGALVEINLATIASYKDGGVSAVVYAGTDG SLTVQMVRPPDEARKAKNSQNRGADPFTFGSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57073; Mature: 57073
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFRDIHSVTRWGIAAIFGTVLLTYSGHWWGKAIAHEKAELIAYKSKVAEQVLEQQATQK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNYALEIRGLGIAINDWHQSSIWREIVKKNSNLASIYSSRPEDYDSDLSSREITRDINIR CCEEEEEEEEEEEEECCHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCCHHHHEEEEEEE VAFQHSAGESVAYWPTPTFALGPPNPYEKPYKAAGLINSGRNKATLGVAQFLWQEDESTS EEEECCCCCEEEECCCCCEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCHH QAQAMIEKLYHFFDGNPQVPQALIASRDGDVTRAVYRKRGTPGLQSAQVVPTVFESMTGL HHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCE LVTRSDRVDRFIRPYAVNEAEDNQNKNTDLGKLWAFYWDRDNAFIDWYENAEKAKGVKDP EEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCEEEECCCHHHHCCCCCC LAPGTMSTAYWQSQLPTLWKTISNRGPGNFEPSPWLPIRWNQHQVKEFDAAPVLGYLHRP CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHHCC IKAPMQDENGKRLKPALQAKALQAAWVQALDTLPDGQKPVRVFYDSTNNPEAEIALNNAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEHHHH HDLNKDGHGLELGNVEEGYDIGRRLGNTGVSGALVEINLATIASYKDGGVSAVVYAGTDG HHCCCCCCCEECCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCC SLTVQMVRPPDEARKAKNSQNRGADPFTFGSP CEEEEEECCCHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MEFRDIHSVTRWGIAAIFGTVLLTYSGHWWGKAIAHEKAELIAYKSKVAEQVLEQQATQK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNYALEIRGLGIAINDWHQSSIWREIVKKNSNLASIYSSRPEDYDSDLSSREITRDINIR CCEEEEEEEEEEEEECCHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCCHHHHEEEEEEE VAFQHSAGESVAYWPTPTFALGPPNPYEKPYKAAGLINSGRNKATLGVAQFLWQEDESTS EEEECCCCCEEEECCCCCEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCHH QAQAMIEKLYHFFDGNPQVPQALIASRDGDVTRAVYRKRGTPGLQSAQVVPTVFESMTGL HHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCE LVTRSDRVDRFIRPYAVNEAEDNQNKNTDLGKLWAFYWDRDNAFIDWYENAEKAKGVKDP EEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCEEEECCCHHHHCCCCCC LAPGTMSTAYWQSQLPTLWKTISNRGPGNFEPSPWLPIRWNQHQVKEFDAAPVLGYLHRP CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHHCC IKAPMQDENGKRLKPALQAKALQAAWVQALDTLPDGQKPVRVFYDSTNNPEAEIALNNAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEHHHH HDLNKDGHGLELGNVEEGYDIGRRLGNTGVSGALVEINLATIASYKDGGVSAVVYAGTDG HHCCCCCCCEECCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCC SLTVQMVRPPDEARKAKNSQNRGADPFTFGSP CEEEEEECCCHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA