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The map label for this gene is 66047307

Identifier: 66047307

GI number: 66047307

Start: 4863154

End: 4865715

Strand: Direct

Name: 66047307

Synonym: Psyr_4080

Alternate gene names: NA

Gene position: 4863154-4865715 (Clockwise)

Preceding gene: 66047306

Following gene: 66047308

Centisome position: 79.81

GC content: 60.23

Gene sequence:

>2562_bases
ATGTTAAAGGATCTAACGGCGCTGTTTGCGCCACAAAACCGTCGCCTGATCAAGCTGACGACCGTTGCCCGTGACGAACA
GGAACTGCTGCTGGAAAGCTTTTCCGGTACTGAAAGCCTGTCCGAACTGTTCAGCTTCGAGTTGTCGATGATCAGCCGCG
ATGCCGGCCTGGAGCTCAAATCGCAGATCGGCCAGCCTGCACAACTGGCAATAGAGCTGGCCACAGGCGAATCGCGTTAC
ATCAATGGCTATATCAGTGCCTTCAGCCTGGAAGGCAGCGACGGCGGTCTGGCACGTTACAGCGCAACACTGAGCCCCTG
GCTGTGGATGCTCTCGCGACGCGTCGACTCGCGCATATTTCAGGAACAGACCATCGAAGCCGTTATCCGAACGGTATTTG
CGGCCTATGGCGCGTTGCCCGATTTCGAGTTTCAGCTCAGCCAGCCACTCAAGACACACAGTTACATCACCCAGTACCGT
GAAAGCGATCTGACCTTTGTATTGCGCTTGCTGGAACACGAAGGGTTGTTCTTCTATTTCGATCACAATCAGGAAAAGCA
CACGCTGATCATTCTTGATCACTCGCGTGACCTCTCGCCCCTGCCGCAACAGCCCACCATTCGTTATCACAGCGCATCCG
TTACCGAGACAGCGGATTCGATTACCGAATGGCGCAGCCATCGACGCCTGCAGTCGGGGCGCATGTCCATTCAGACATTT
GATTACAAGCAGCCGCGCAATTCGCTGCCGGTTGGCATGCCGAGCCTCAACGAGCAGGGCAACGTCGATTCGTATGAAGT
GTATGACGTGCTCGATCACTACAGCCATGGCACCTTCAAAGACGGTGAACGCCTGGTACGTCAGCGTCTGGAGGCCATTG
AAGTTCAGGGCAAGACATTCACCGGCAACAGTAACTGCCGCGCCATGTACCCAGGCCACACTTTTGAGCTGACCCAGCAT
TTTGATCATGACCGCGGCTCTGCTGAAGATCGCAGTTTTCTGCTGATAACGGTCAAGCATGAGGGCAGCAACAATTACCT
GTCGGACGAAGGCGCGGGCTACACGAACGAGTTCGTGTGCATTCGCCACAAGATTCCCTACCGTCATCCGATCACAGTCC
CGCGCCCGAGCATTAACGGCCCGCTGAGCGCCATCGTGGTCGGGCCGGACGGTGAGGAAGTGTTCACTGATGAACTGGCG
CGGATACAGGTCAGGTTCCACTGGCAGCGCGGCGACAGCCTGCCGCAAGGCACCACTTGGTTAAGGGTGGCGATGCCCAG
TGCCGGCAGCGGCTTCGGGCATCAGTTCATGCCACGCATCGGCCAGGAAGTGTTGGTGACGTTTCTGGCAGGCGATATCG
ACCGGCCTCTGGTGACGTCGGTGCTCTATAACAACATTAATCTGCCGCCACGCTTCAGCAAGGCCTCGGGGCTGCCCGGC
AACCGCACGCTGTCGGGGATCCGCACCCAGGAACACAAAGGCAGCGGCTTCAACGAACTGCTGTTCGATGACACCCCAGG
CTCGCTGCGCGCACGCATGGGCACGACCCATCAGGCCACCGCCCTCAACCTGGGCAAACTGACCGACCCGCGCACTGACG
GCACCGCCCAGCCACGCGGCAACGGCGCAGAACTGCGCACCGATGCCGCCATCGCCCTGCGTGCCGCGCAAGGCATGCTG
TTGACCACCTACGCGCGTACCGACGCAAAAGGCTCACAGCTGGATCGCGAAGAGCTGCTCAAACTGCTGGCCGAGTGCGG
CGAGCTGTTCAAATCTCTCGGCGAAACCGCCGCCGCACGTGGCAGTCAGGCGGTGGATGTCAAAGGTATGGAAGCCTTGC
GCCAGTCGCTTGATCAATGGCCCGCGCCGGACAATAACGGCCTGGGCGACCCGGTACTGGCCATGACCGCAGTAGCAGGC
ATCGCCAGCGCCACGCCGCGCTCGCAGGTGCACTATGCCGGTGAAAATCACGACACCACCGCGCAGGACAACCTGCAATT
GACCAGCGGCGCGGCCATGCACCTGCAAGCGGGCAAAGGGCTGTCGGCCTTCGCCCAGGACGCTGGCATCAGCGCCATCG
CCAACCGCGGCAAAGTGCTGGTGCAAGCGCAGGAAGACGACATCGCCCTCAATGCCCAGAAAAACCTGCACGTCTCGGCC
GTCGAAGGCGAAGTGGTCATCACCGCGCCGACCATCCGCCTGGTCGCCGATGACGGCAGTTACATCAAGATTGGCGGCGG
CGTCGAGATTGGCTCGCAAGGCAAAGTCACTGTGCACGCCAGCGAACACGACTGGATCGGCCCCAAGACCGACAGCGCTG
CGATCCCCTCATTCGGCCGCGACCCCGCCGCCCAGCAGGTCACCTTCCACTACCCCGGCCACAGCGAACAAAGCCCGCGG
GCAGCAGCGGATCACTCGTATGAAATCAAACTGGAAGATGGCAGCCTGGTGAAAGGAATGACGAACGCAGACGGACTGAC
CGAGCGCGTGGAACGCGAAATGATGCATCAGGCGCAAGTATCGGCACTGCGCAGCGGCACCCCGAAAGGAGGTGCGCAAT
GA

Upstream 100 bases:

>100_bases
TAAATGTGTGCCCCCGGAAAGAAGTCTATAGACTCACGCGCCTCTCTATATCAGCACTCTCGACCGGAACGAGCGGCTGG
CGTTATATAACGGAGCAACA

Downstream 100 bases:

>100_bases
ACGGCGCCGATGAATACGCCGTTGCCCAAGGCAACACACGCCTGATCCCCAACCTCAACACCACCTGCAAAATGGAAGTG
CCCGGCGATTTGCCAGGCGT

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VgrG Protein; Rhs Accessory Genetic Element; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Family Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; VrgG Protein; Rhs Element Vgr-Related Protein; Vgr Protein; VgrG Family T6SS G

Number of amino acids: Translated: 853; Mature: 853

Protein sequence:

>853_residues
MLKDLTALFAPQNRRLIKLTTVARDEQELLLESFSGTESLSELFSFELSMISRDAGLELKSQIGQPAQLAIELATGESRY
INGYISAFSLEGSDGGLARYSATLSPWLWMLSRRVDSRIFQEQTIEAVIRTVFAAYGALPDFEFQLSQPLKTHSYITQYR
ESDLTFVLRLLEHEGLFFYFDHNQEKHTLIILDHSRDLSPLPQQPTIRYHSASVTETADSITEWRSHRRLQSGRMSIQTF
DYKQPRNSLPVGMPSLNEQGNVDSYEVYDVLDHYSHGTFKDGERLVRQRLEAIEVQGKTFTGNSNCRAMYPGHTFELTQH
FDHDRGSAEDRSFLLITVKHEGSNNYLSDEGAGYTNEFVCIRHKIPYRHPITVPRPSINGPLSAIVVGPDGEEVFTDELA
RIQVRFHWQRGDSLPQGTTWLRVAMPSAGSGFGHQFMPRIGQEVLVTFLAGDIDRPLVTSVLYNNINLPPRFSKASGLPG
NRTLSGIRTQEHKGSGFNELLFDDTPGSLRARMGTTHQATALNLGKLTDPRTDGTAQPRGNGAELRTDAAIALRAAQGML
LTTYARTDAKGSQLDREELLKLLAECGELFKSLGETAAARGSQAVDVKGMEALRQSLDQWPAPDNNGLGDPVLAMTAVAG
IASATPRSQVHYAGENHDTTAQDNLQLTSGAAMHLQAGKGLSAFAQDAGISAIANRGKVLVQAQEDDIALNAQKNLHVSA
VEGEVVITAPTIRLVADDGSYIKIGGGVEIGSQGKVTVHASEHDWIGPKTDSAAIPSFGRDPAAQQVTFHYPGHSEQSPR
AAADHSYEIKLEDGSLVKGMTNADGLTERVEREMMHQAQVSALRSGTPKGGAQ

Sequences:

>Translated_853_residues
MLKDLTALFAPQNRRLIKLTTVARDEQELLLESFSGTESLSELFSFELSMISRDAGLELKSQIGQPAQLAIELATGESRY
INGYISAFSLEGSDGGLARYSATLSPWLWMLSRRVDSRIFQEQTIEAVIRTVFAAYGALPDFEFQLSQPLKTHSYITQYR
ESDLTFVLRLLEHEGLFFYFDHNQEKHTLIILDHSRDLSPLPQQPTIRYHSASVTETADSITEWRSHRRLQSGRMSIQTF
DYKQPRNSLPVGMPSLNEQGNVDSYEVYDVLDHYSHGTFKDGERLVRQRLEAIEVQGKTFTGNSNCRAMYPGHTFELTQH
FDHDRGSAEDRSFLLITVKHEGSNNYLSDEGAGYTNEFVCIRHKIPYRHPITVPRPSINGPLSAIVVGPDGEEVFTDELA
RIQVRFHWQRGDSLPQGTTWLRVAMPSAGSGFGHQFMPRIGQEVLVTFLAGDIDRPLVTSVLYNNINLPPRFSKASGLPG
NRTLSGIRTQEHKGSGFNELLFDDTPGSLRARMGTTHQATALNLGKLTDPRTDGTAQPRGNGAELRTDAAIALRAAQGML
LTTYARTDAKGSQLDREELLKLLAECGELFKSLGETAAARGSQAVDVKGMEALRQSLDQWPAPDNNGLGDPVLAMTAVAG
IASATPRSQVHYAGENHDTTAQDNLQLTSGAAMHLQAGKGLSAFAQDAGISAIANRGKVLVQAQEDDIALNAQKNLHVSA
VEGEVVITAPTIRLVADDGSYIKIGGGVEIGSQGKVTVHASEHDWIGPKTDSAAIPSFGRDPAAQQVTFHYPGHSEQSPR
AAADHSYEIKLEDGSLVKGMTNADGLTERVEREMMHQAQVSALRSGTPKGGAQ
>Mature_853_residues
MLKDLTALFAPQNRRLIKLTTVARDEQELLLESFSGTESLSELFSFELSMISRDAGLELKSQIGQPAQLAIELATGESRY
INGYISAFSLEGSDGGLARYSATLSPWLWMLSRRVDSRIFQEQTIEAVIRTVFAAYGALPDFEFQLSQPLKTHSYITQYR
ESDLTFVLRLLEHEGLFFYFDHNQEKHTLIILDHSRDLSPLPQQPTIRYHSASVTETADSITEWRSHRRLQSGRMSIQTF
DYKQPRNSLPVGMPSLNEQGNVDSYEVYDVLDHYSHGTFKDGERLVRQRLEAIEVQGKTFTGNSNCRAMYPGHTFELTQH
FDHDRGSAEDRSFLLITVKHEGSNNYLSDEGAGYTNEFVCIRHKIPYRHPITVPRPSINGPLSAIVVGPDGEEVFTDELA
RIQVRFHWQRGDSLPQGTTWLRVAMPSAGSGFGHQFMPRIGQEVLVTFLAGDIDRPLVTSVLYNNINLPPRFSKASGLPG
NRTLSGIRTQEHKGSGFNELLFDDTPGSLRARMGTTHQATALNLGKLTDPRTDGTAQPRGNGAELRTDAAIALRAAQGML
LTTYARTDAKGSQLDREELLKLLAECGELFKSLGETAAARGSQAVDVKGMEALRQSLDQWPAPDNNGLGDPVLAMTAVAG
IASATPRSQVHYAGENHDTTAQDNLQLTSGAAMHLQAGKGLSAFAQDAGISAIANRGKVLVQAQEDDIALNAQKNLHVSA
VEGEVVITAPTIRLVADDGSYIKIGGGVEIGSQGKVTVHASEHDWIGPKTDSAAIPSFGRDPAAQQVTFHYPGHSEQSPR
AAADHSYEIKLEDGSLVKGMTNADGLTERVEREMMHQAQVSALRSGTPKGGAQ

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93532; Mature: 93532

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDLTALFAPQNRRLIKLTTVARDEQELLLESFSGTESLSELFSFELSMISRDAGLELK
CCCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHH
SQIGQPAQLAIELATGESRYINGYISAFSLEGSDGGLARYSATLSPWLWMLSRRVDSRIF
HHCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHH
QEQTIEAVIRTVFAAYGALPDFEFQLSQPLKTHSYITQYRESDLTFVLRLLEHEGLFFYF
HHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEE
DHNQEKHTLIILDHSRDLSPLPQQPTIRYHSASVTETADSITEWRSHRRLQSGRMSIQTF
ECCCCCEEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
DYKQPRNSLPVGMPSLNEQGNVDSYEVYDVLDHYSHGTFKDGERLVRQRLEAIEVQGKTF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCEE
TGNSNCRAMYPGHTFELTQHFDHDRGSAEDRSFLLITVKHEGSNNYLSDEGAGYTNEFVC
ECCCCCEEECCCCEEEHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEE
IRHKIPYRHPITVPRPSINGPLSAIVVGPDGEEVFTDELARIQVRFHWQRGDSLPQGTTW
EEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEEEEEEEEEECCCCCCCCCEE
LRVAMPSAGSGFGHQFMPRIGQEVLVTFLAGDIDRPLVTSVLYNNINLPPRFSKASGLPG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
NRTLSGIRTQEHKGSGFNELLFDDTPGSLRARMGTTHQATALNLGKLTDPRTDGTAQPRG
CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCHHEEECCCCCCCCCCCCCCCCC
NGAELRTDAAIALRAAQGMLLTTYARTDAKGSQLDREELLKLLAECGELFKSLGETAAAR
CCCCEECCHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GSQAVDVKGMEALRQSLDQWPAPDNNGLGDPVLAMTAVAGIASATPRSQVHYAGENHDTT
CCCEECHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
AQDNLQLTSGAAMHLQAGKGLSAFAQDAGISAIANRGKVLVQAQEDDIALNAQKNLHVSA
CCCCEEEECCCEEEEECCCCHHHHHHHCCHHHHHCCCEEEEEECCCCEEEECCCCEEEEE
VEGEVVITAPTIRLVADDGSYIKIGGGVEIGSQGKVTVHASEHDWIGPKTDSAAIPSFGR
ECCCEEEEECEEEEEECCCCEEEECCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC
DPAAQQVTFHYPGHSEQSPRAAADHSYEIKLEDGSLVKGMTNADGLTERVEREMMHQAQV
CCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHH
SALRSGTPKGGAQ
HHHHCCCCCCCCC
>Mature Secondary Structure
MLKDLTALFAPQNRRLIKLTTVARDEQELLLESFSGTESLSELFSFELSMISRDAGLELK
CCCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHH
SQIGQPAQLAIELATGESRYINGYISAFSLEGSDGGLARYSATLSPWLWMLSRRVDSRIF
HHCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHH
QEQTIEAVIRTVFAAYGALPDFEFQLSQPLKTHSYITQYRESDLTFVLRLLEHEGLFFYF
HHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEE
DHNQEKHTLIILDHSRDLSPLPQQPTIRYHSASVTETADSITEWRSHRRLQSGRMSIQTF
ECCCCCEEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
DYKQPRNSLPVGMPSLNEQGNVDSYEVYDVLDHYSHGTFKDGERLVRQRLEAIEVQGKTF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCEE
TGNSNCRAMYPGHTFELTQHFDHDRGSAEDRSFLLITVKHEGSNNYLSDEGAGYTNEFVC
ECCCCCEEECCCCEEEHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEE
IRHKIPYRHPITVPRPSINGPLSAIVVGPDGEEVFTDELARIQVRFHWQRGDSLPQGTTW
EEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEEEEEEEEEECCCCCCCCCEE
LRVAMPSAGSGFGHQFMPRIGQEVLVTFLAGDIDRPLVTSVLYNNINLPPRFSKASGLPG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
NRTLSGIRTQEHKGSGFNELLFDDTPGSLRARMGTTHQATALNLGKLTDPRTDGTAQPRG
CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCHHEEECCCCCCCCCCCCCCCCC
NGAELRTDAAIALRAAQGMLLTTYARTDAKGSQLDREELLKLLAECGELFKSLGETAAAR
CCCCEECCHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GSQAVDVKGMEALRQSLDQWPAPDNNGLGDPVLAMTAVAGIASATPRSQVHYAGENHDTT
CCCEECHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCC
AQDNLQLTSGAAMHLQAGKGLSAFAQDAGISAIANRGKVLVQAQEDDIALNAQKNLHVSA
CCCCEEEECCCEEEEECCCCHHHHHHHCCHHHHHCCCEEEEEECCCCEEEECCCCEEEEE
VEGEVVITAPTIRLVADDGSYIKIGGGVEIGSQGKVTVHASEHDWIGPKTDSAAIPSFGR
ECCCEEEEECEEEEEECCCCEEEECCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC
DPAAQQVTFHYPGHSEQSPRAAADHSYEIKLEDGSLVKGMTNADGLTERVEREMMHQAQV
CCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHHHHHHHHHH
SALRSGTPKGGAQ
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA