| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047273
Identifier: 66047273
GI number: 66047273
Start: 4830159
End: 4830488
Strand: Reverse
Name: 66047273
Synonym: Psyr_4046
Alternate gene names: NA
Gene position: 4830488-4830159 (Counterclockwise)
Preceding gene: 66047274
Following gene: 66047272
Centisome position: 79.27
GC content: 58.79
Gene sequence:
>330_bases ATGAGCTCGCGTCGAATGTTCATCCTGCGCCGTCCCTTCAGCAGCCTGCTGTTGCTGATCGTCGCCGCACTTGCCGTACT CGCCTGGCAGTACCGTGTCAACCTGCAGGCATTTCCGACCATCATCAGTGCCTACACCGCCAAGGAATACTGTTCGTGCA GGTACGTCATGAACAATTCCGAAGCGTATTGCCAGGGCTACATCAAGCAGTATCTGCCCAGCACCCTGGTCGACGACAGC AGTCAAAAACGGGTCATTGCCAGCGGCCTGGGACGCACCAGCAGTGCATCGTGGCAGGGTGAGCGACAGGGCTGTCGCCT GCTGCCATGA
Upstream 100 bases:
>100_bases AGCTGGTGATCGTGCGCTATGCCGATGACCGCGACAGTACCTACAACCACAATGAGATGCTCAAGCGCGTACAGGCCGCG TTCGGCAAGGAGGGCGGTCA
Downstream 100 bases:
>100_bases GGGCTTGATGGATTGCCGCCGAACGCAGGCGTTTGCCAGCGGTCAGACAGGCGGATAAGGTGGCCCTCAATTGCACGTCT GGAGTCTGCATGCTCACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSSRRMFILRRPFSSLLLLIVAALAVLAWQYRVNLQAFPTIISAYTAKEYCSCRYVMNNSEAYCQGYIKQYLPSTLVDDS SQKRVIASGLGRTSSASWQGERQGCRLLP
Sequences:
>Translated_109_residues MSSRRMFILRRPFSSLLLLIVAALAVLAWQYRVNLQAFPTIISAYTAKEYCSCRYVMNNSEAYCQGYIKQYLPSTLVDDS SQKRVIASGLGRTSSASWQGERQGCRLLP >Mature_108_residues SSRRMFILRRPFSSLLLLIVAALAVLAWQYRVNLQAFPTIISAYTAKEYCSCRYVMNNSEAYCQGYIKQYLPSTLVDDSS QKRVIASGLGRTSSASWQGERQGCRLLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12336; Mature: 12205
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRRMFILRRPFSSLLLLIVAALAVLAWQYRVNLQAFPTIISAYTAKEYCSCRYVMNNS CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCC EAYCQGYIKQYLPSTLVDDSSQKRVIASGLGRTSSASWQGERQGCRLLP HHHHHHHHHHHCCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSRRMFILRRPFSSLLLLIVAALAVLAWQYRVNLQAFPTIISAYTAKEYCSCRYVMNNS CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCC EAYCQGYIKQYLPSTLVDDSSQKRVIASGLGRTSSASWQGERQGCRLLP HHHHHHHHHHHCCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA