Click here to switch to the map view.

The map label for this gene is 66047250

Identifier: 66047250

GI number: 66047250

Start: 4790447

End: 4792036

Strand: Direct

Name: 66047250

Synonym: Psyr_4023

Alternate gene names: NA

Gene position: 4790447-4792036 (Clockwise)

Preceding gene: 66047249

Following gene: 66047251

Centisome position: 78.61

GC content: 62.64

Gene sequence:

>1590_bases
ATGCGCCTGACTGAGTCGACTGTTGCCATACGCCCTCGCTCGCCCTGGGAGGCCATCGACCTGGGCGTACTGCTCGCCGG
GCGGCACCGCGGCGTTTTGATGAGCAGTTGGGCAATCGTCACCCTGCCCCTTTTCTGCATCCTCAGTGCGTTGCTCTGGG
ATTACCCCACGGCCGCCATTCTGCTGTTCTGGTGGCTCAAACCTGCGTTCGAACGGTTGCCGCTGCTGATCCTTTCGCAG
TCACTGTTCGGTGCCACGCCGACACTGCGACAGGCCCTCAAGGCCTGGCCGGCGACCCTGAAGGAGCAACTGCTGCCCAG
CCTGTTGTGGCGACGTCTTTCCCTGAGTCGCAGTTTCCAACTGCCGGTGCAGCAGCTGGAGCATCTGGCCGGTACCGAGC
GCGCCCTGCGCATCAGCCTGCTCAGCCAGAAAGACCTGCGTGCCGCACAGCTGCTCACCATCGTTGGCGCACACCTGGAA
TACGCACTGTGGATAGGCCTGCTGGTCCTGCTCTACGCCCTGATACCGCAGCAGATCCAGATCGACTGGCACTGGATGAA
TCTGCTCGACGTCGAAAACCAATGGCTGTGGATCGACCACCTGACCAACCTCTTCTATGCCTTGGCGCTGATACTTTGGG
AACCTGTATATGTCGCCTGCGGCTTCACGCTGTATTTGAATCGCCGCACGGTTCTTGAAGCCTGGGACATAGAACTGATC
TTCCGACGCCTGCGTCAGCGCCTGATCGGTACGGCCTATGCCGTATTGATGGGCGTCGGGCTGGTACTTTCCGCAGCACC
CGCACCGGTCTGGGCCGATCAGCAAAGCTACAGCTGCCCGCTGCCGGAATCCGCCCCTGCGCAATCCGCTCCGTCCGTGG
CGGCACCCGATACGCCGCGCCTGACCCGCCAGTCCCTGACCAGCGAAGCGGCGCGCAGCGAGATCCAGAGCGTTCTGCAA
CAGCCACCCTTCCGCAATCCCAGGACCGAAACTGGCTGGCGCTTTCCTGAAAAACAGAAAGGCCCGTCTGCAGCCCGGGA
CGCGCGCGATCAGAGCTGGCTGATGACCTGGCTCAATCGGTTTCTGCGCGCAGCGAGCGCCTTGGCCAGCCTGATTGAAG
TACTGCTGTGGGGCGTGGTCATCGGGCTTGTAGGGCTGGTGATCTTTCGTTACCAGGACTGGTTCAGGACCTTCGTTAGC
CGGAAGGCCGGCAAGGCAAACACCACCCGCCCGGCACCCGAGCAGCTCTTTGGTCTGCAAGTGAATGCCGAAAGCCTGCC
CGACGATGTTGCCGGCCGGGCCGAGCAGCTCTGGAACAGCCAGCCCCGCGAAGCGCTGGGTCTGTTGTACCGCGCCCTGC
TCAGCCGCTTGCTGAGCGACTATCGATTGCCATTGAAAAATGCCGATACCGAAAGTCAGGTACTCGAACGCATCGCCGCG
CTCAACCAGCCGCTGCTGAGTGAGTTCAGCCGCACGCTGACCGCACACTGGCAAAACCTCGCCTACGGGCATCGCCTGCC
ACCGGCCCACGCCCGGCAGGAACTCTGCGATGGCTGGCGTCGCCTGTTCAACCAGGCAGCGCAGCCATGA

Upstream 100 bases:

>100_bases
TCATCGATGACCTGGCCCGGGCCGCTTCTCAAGTACCTGACAGGTGCCGTCCTGTGGTTGCTGGTGGCCGCGTATCTGAC
TCTGGCAGGACGTACACCTC

Downstream 100 bases:

>100_bases
CCCGCCGCACCGGGCTGCTGATCGGGCTGCTGGTCCTGTCATTACTGGCAGGCGGCGCGCTGTTTCTGAGCACCCAGCTC
GAGCGCTACGAGAAAACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MRLTESTVAIRPRSPWEAIDLGVLLAGRHRGVLMSSWAIVTLPLFCILSALLWDYPTAAILLFWWLKPAFERLPLLILSQ
SLFGATPTLRQALKAWPATLKEQLLPSLLWRRLSLSRSFQLPVQQLEHLAGTERALRISLLSQKDLRAAQLLTIVGAHLE
YALWIGLLVLLYALIPQQIQIDWHWMNLLDVENQWLWIDHLTNLFYALALILWEPVYVACGFTLYLNRRTVLEAWDIELI
FRRLRQRLIGTAYAVLMGVGLVLSAAPAPVWADQQSYSCPLPESAPAQSAPSVAAPDTPRLTRQSLTSEAARSEIQSVLQ
QPPFRNPRTETGWRFPEKQKGPSAARDARDQSWLMTWLNRFLRAASALASLIEVLLWGVVIGLVGLVIFRYQDWFRTFVS
RKAGKANTTRPAPEQLFGLQVNAESLPDDVAGRAEQLWNSQPREALGLLYRALLSRLLSDYRLPLKNADTESQVLERIAA
LNQPLLSEFSRTLTAHWQNLAYGHRLPPAHARQELCDGWRRLFNQAAQP

Sequences:

>Translated_529_residues
MRLTESTVAIRPRSPWEAIDLGVLLAGRHRGVLMSSWAIVTLPLFCILSALLWDYPTAAILLFWWLKPAFERLPLLILSQ
SLFGATPTLRQALKAWPATLKEQLLPSLLWRRLSLSRSFQLPVQQLEHLAGTERALRISLLSQKDLRAAQLLTIVGAHLE
YALWIGLLVLLYALIPQQIQIDWHWMNLLDVENQWLWIDHLTNLFYALALILWEPVYVACGFTLYLNRRTVLEAWDIELI
FRRLRQRLIGTAYAVLMGVGLVLSAAPAPVWADQQSYSCPLPESAPAQSAPSVAAPDTPRLTRQSLTSEAARSEIQSVLQ
QPPFRNPRTETGWRFPEKQKGPSAARDARDQSWLMTWLNRFLRAASALASLIEVLLWGVVIGLVGLVIFRYQDWFRTFVS
RKAGKANTTRPAPEQLFGLQVNAESLPDDVAGRAEQLWNSQPREALGLLYRALLSRLLSDYRLPLKNADTESQVLERIAA
LNQPLLSEFSRTLTAHWQNLAYGHRLPPAHARQELCDGWRRLFNQAAQP
>Mature_529_residues
MRLTESTVAIRPRSPWEAIDLGVLLAGRHRGVLMSSWAIVTLPLFCILSALLWDYPTAAILLFWWLKPAFERLPLLILSQ
SLFGATPTLRQALKAWPATLKEQLLPSLLWRRLSLSRSFQLPVQQLEHLAGTERALRISLLSQKDLRAAQLLTIVGAHLE
YALWIGLLVLLYALIPQQIQIDWHWMNLLDVENQWLWIDHLTNLFYALALILWEPVYVACGFTLYLNRRTVLEAWDIELI
FRRLRQRLIGTAYAVLMGVGLVLSAAPAPVWADQQSYSCPLPESAPAQSAPSVAAPDTPRLTRQSLTSEAARSEIQSVLQ
QPPFRNPRTETGWRFPEKQKGPSAARDARDQSWLMTWLNRFLRAASALASLIEVLLWGVVIGLVGLVIFRYQDWFRTFVS
RKAGKANTTRPAPEQLFGLQVNAESLPDDVAGRAEQLWNSQPREALGLLYRALLSRLLSDYRLPLKNADTESQVLERIAA
LNQPLLSEFSRTLTAHWQNLAYGHRLPPAHARQELCDGWRRLFNQAAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60064; Mature: 60064

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTESTVAIRPRSPWEAIDLGVLLAGRHRGVLMSSWAIVTLPLFCILSALLWDYPTAAI
CCCCCCCEEECCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LLFWWLKPAFERLPLLILSQSLFGATPTLRQALKAWPATLKEQLLPSLLWRRLSLSRSFQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPVQQLEHLAGTERALRISLLSQKDLRAAQLLTIVGAHLEYALWIGLLVLLYALIPQQIQ
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE
IDWHWMNLLDVENQWLWIDHLTNLFYALALILWEPVYVACGFTLYLNRRTVLEAWDIELI
EEEEEHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHH
FRRLRQRLIGTAYAVLMGVGLVLSAAPAPVWADQQSYSCPLPESAPAQSAPSVAAPDTPR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LTRQSLTSEAARSEIQSVLQQPPFRNPRTETGWRFPEKQKGPSAARDARDQSWLMTWLNR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH
FLRAASALASLIEVLLWGVVIGLVGLVIFRYQDWFRTFVSRKAGKANTTRPAPEQLFGLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCE
VNAESLPDDVAGRAEQLWNSQPREALGLLYRALLSRLLSDYRLPLKNADTESQVLERIAA
ECHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LNQPLLSEFSRTLTAHWQNLAYGHRLPPAHARQELCDGWRRLFNQAAQP
HCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLTESTVAIRPRSPWEAIDLGVLLAGRHRGVLMSSWAIVTLPLFCILSALLWDYPTAAI
CCCCCCCEEECCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LLFWWLKPAFERLPLLILSQSLFGATPTLRQALKAWPATLKEQLLPSLLWRRLSLSRSFQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LPVQQLEHLAGTERALRISLLSQKDLRAAQLLTIVGAHLEYALWIGLLVLLYALIPQQIQ
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEE
IDWHWMNLLDVENQWLWIDHLTNLFYALALILWEPVYVACGFTLYLNRRTVLEAWDIELI
EEEEEHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHH
FRRLRQRLIGTAYAVLMGVGLVLSAAPAPVWADQQSYSCPLPESAPAQSAPSVAAPDTPR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LTRQSLTSEAARSEIQSVLQQPPFRNPRTETGWRFPEKQKGPSAARDARDQSWLMTWLNR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH
FLRAASALASLIEVLLWGVVIGLVGLVIFRYQDWFRTFVSRKAGKANTTRPAPEQLFGLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCE
VNAESLPDDVAGRAEQLWNSQPREALGLLYRALLSRLLSDYRLPLKNADTESQVLERIAA
ECHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LNQPLLSEFSRTLTAHWQNLAYGHRLPPAHARQELCDGWRRLFNQAAQP
HCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA