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The map label for this gene is 66047248

Identifier: 66047248

GI number: 66047248

Start: 4788758

End: 4789483

Strand: Direct

Name: 66047248

Synonym: Psyr_4021

Alternate gene names: NA

Gene position: 4788758-4789483 (Clockwise)

Preceding gene: 66047246

Following gene: 66047249

Centisome position: 78.59

GC content: 63.36

Gene sequence:

>726_bases
ATGTCATCCCGTCCCGCTTCGCCAAGGAATGCAGCGCTGCCCACGCCGTTGGACACGCGCATTGAAATCGAGACGCCAGA
AGGCATCGATATGCTTCTGCGCCCTGCCGGGCTGGTTTCCCGCGCACTGGCGTTCGGCATCGACTTCGCCATTCGCGCAG
CCCTCGTCGGCCTGTTCTTTGTGCTTCTGCAGTTACTCGACAAGCTCGGCATGGGTCTGGCCGCTCTGGTGTTCTTTCTG
GTGAACTGGTGGTACATGGTGCTGTTTGAAGTGCTCAACCAGGGACGCACACCCGGAAAGCGCCTGCTCGGGCTGCGGGT
GGTGCACGACGACGGCACGCCCATCGACTGGTCTTCGTCGCTGATCCGTAACCTGCTGCGCTTCGTCGACATGCTCCCGC
TGGGCTACGGGCTGGGGGCGATTACTTGTCTGAACCACCCGTTCTTCAAACGGCTGGGCGATCTTGCAGCGGGAACGCTG
GTGATTTACAGCGACCGGCCGGTAGCGCGCCCTACCCTGCCGCAGGCCGATCCGGTCATCGTGCCTTTTGCCCTGCATCT
GGATGAACAGCGGGCGGTGCTCGGCCTGGCGGAACGGCAGGCTGAACTGTCCAGCGCGCGAACCCAGGAACTCGCGGCCA
TCCTTGCCGAACCCTTGCGTGTCTCCGCCGACACGGCGGTCGCTCATGTAAACGGCATCGCCCGCAACCTGCTGGGGCCT
ACATGA

Upstream 100 bases:

>100_bases
GGGAAATGTTTTCTTACAGCCCGCGTATTGAATGGTCGGTTGCTTAGCTCCGCTGCGCTAGCTAGCATCAGTTTTCGTTT
TCAGGCGCGTCCTTCCGACA

Downstream 100 bases:

>100_bases
AGCAGAGCCTGTTTGAAACCCGCCATCAGCAGGAGTGGCAACGCTTCGAGCAGCGCCTGACGGCCCTTGAACAAGGCAAG
GGCGATGTCAGCGGCGGCGC

Product: RDD

Products: NA

Alternate protein names: RDD Domain-Containing Protein; RDD Family Protein; Transmembrane Protein; Integral Membrane Protein; Rdd Family Protein; RDD Domain Protein; Rdd Domain Protein

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSSRPASPRNAALPTPLDTRIEIETPEGIDMLLRPAGLVSRALAFGIDFAIRAALVGLFFVLLQLLDKLGMGLAALVFFL
VNWWYMVLFEVLNQGRTPGKRLLGLRVVHDDGTPIDWSSSLIRNLLRFVDMLPLGYGLGAITCLNHPFFKRLGDLAAGTL
VIYSDRPVARPTLPQADPVIVPFALHLDEQRAVLGLAERQAELSSARTQELAAILAEPLRVSADTAVAHVNGIARNLLGP
T

Sequences:

>Translated_241_residues
MSSRPASPRNAALPTPLDTRIEIETPEGIDMLLRPAGLVSRALAFGIDFAIRAALVGLFFVLLQLLDKLGMGLAALVFFL
VNWWYMVLFEVLNQGRTPGKRLLGLRVVHDDGTPIDWSSSLIRNLLRFVDMLPLGYGLGAITCLNHPFFKRLGDLAAGTL
VIYSDRPVARPTLPQADPVIVPFALHLDEQRAVLGLAERQAELSSARTQELAAILAEPLRVSADTAVAHVNGIARNLLGP
T
>Mature_240_residues
SSRPASPRNAALPTPLDTRIEIETPEGIDMLLRPAGLVSRALAFGIDFAIRAALVGLFFVLLQLLDKLGMGLAALVFFLV
NWWYMVLFEVLNQGRTPGKRLLGLRVVHDDGTPIDWSSSLIRNLLRFVDMLPLGYGLGAITCLNHPFFKRLGDLAAGTLV
IYSDRPVARPTLPQADPVIVPFALHLDEQRAVLGLAERQAELSSARTQELAAILAEPLRVSADTAVAHVNGIARNLLGPT

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26204; Mature: 26073

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRPASPRNAALPTPLDTRIEIETPEGIDMLLRPAGLVSRALAFGIDFAIRAALVGLFF
CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLLQLLDKLGMGLAALVFFLVNWWYMVLFEVLNQGRTPGKRLLGLRVVHDDGTPIDWSSS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCCCHHHH
LIRNLLRFVDMLPLGYGLGAITCLNHPFFKRLGDLAAGTLVIYSDRPVARPTLPQADPVI
HHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEE
VPFALHLDEQRAVLGLAERQAELSSARTQELAAILAEPLRVSADTAVAHVNGIARNLLGP
EEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
T
C
>Mature Secondary Structure 
SSRPASPRNAALPTPLDTRIEIETPEGIDMLLRPAGLVSRALAFGIDFAIRAALVGLFF
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLLQLLDKLGMGLAALVFFLVNWWYMVLFEVLNQGRTPGKRLLGLRVVHDDGTPIDWSSS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCCCHHHH
LIRNLLRFVDMLPLGYGLGAITCLNHPFFKRLGDLAAGTLVIYSDRPVARPTLPQADPVI
HHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEE
VPFALHLDEQRAVLGLAERQAELSSARTQELAAILAEPLRVSADTAVAHVNGIARNLLGP
EEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA