Click here to switch to the map view.

The map label for this gene is catJ [H]

Identifier: 66047239

GI number: 66047239

Start: 4779614

End: 4780393

Strand: Reverse

Name: catJ [H]

Synonym: Psyr_4012

Alternate gene names: 66047239

Gene position: 4780393-4779614 (Counterclockwise)

Preceding gene: 66047240

Following gene: 66047238

Centisome position: 78.45

GC content: 62.44

Gene sequence:

>780_bases
ATGACTTACTCCACCAGTGAAATGATGACCGTTGCCGCAGCCCGTCGCTTGCGCAATGGTTCTGTGTGCTTCGTCGGCAT
CGGCCTGCCTTCGAAGGCGGCGAACCTGGCACGTCTTACCTCTGCGCCTGACGTGGTACTGATCTACGAGTCCGGTCCGA
TTGGTGCCAAGCCCACGGTGTTGCCGCTGTCTATCGGCGATGGCGAGTTGGCTGAAACCGCAGACACAGTGGTATCCACC
AGCGAAATCTTTCGTTACTGGCTGCAGGGCGGTCGCGTCGATGTCGGCTTTCTTGGCGCAGCGCAGGTCGACCGCTTCGG
CAACATCAACACCACCGTGGTCGGTGATTACCACCATCCCAAAGTGCGTCTGCCGGGCGCCGGTGGTGCGCCGGAGATCG
CTGGGTCGGCCAAGTCAGTGCTGATCATTCTCAAGCAGTCGGCGCGTTCGTTCGTCGACAAGCTGGACTTCATCACCTCG
GTCGGGCATGGCGAAGGCGGCGACTCGCGCAAACGTCTGGGCCTGCCCGGTGCCGGCCCGGTGGGCATCATCACCGACCT
GTGCATCATGGAGCCGGAAGCCGGCACCCACGAGTTCGTCGTGACTACGCTGCATCCTGGCGTGACCCGTGAGCAGGTTA
TCGCTGCAACCGGTTGGGCGATCCGCTTTGCCGACACCGTTGTTGTGTCCGAAGAGCCTACCGAGGTCGAGCTGACGGCG
CTGCGTGATCTGGAAGCACGGACTGCCGCGGCTCACGGTCAGGTTGCAGGAGAAGCGTGA

Upstream 100 bases:

>100_bases
ACCGGGAGACCTTCACCGCGTGGATCGATGAATACATCCACGGCACCGCAGATTTCAGTGAATTCCAGAGCAAGCTGGCT
CGCGCTTCGGAGGCCAAATA

Downstream 100 bases:

>100_bases
TGCGTGAAGTGTTTATTTGCGATGCGATTCGTACGCCCATCGGTCGCTTTGGTGGCGGGCTGTCTTCGGTGCGTGCAGAC
GACCTGGCGGCGGTGCCGAT

Product: glutaconate CoA-transferase

Products: NA

Alternate protein names: 3-oxoadipate:succinyl-CoA transferase subunit B; Beta-ketoadipate:succinyl-CoA transferase subunit B [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTYSTSEMMTVAAARRLRNGSVCFVGIGLPSKAANLARLTSAPDVVLIYESGPIGAKPTVLPLSIGDGELAETADTVVST
SEIFRYWLQGGRVDVGFLGAAQVDRFGNINTTVVGDYHHPKVRLPGAGGAPEIAGSAKSVLIILKQSARSFVDKLDFITS
VGHGEGGDSRKRLGLPGAGPVGIITDLCIMEPEAGTHEFVVTTLHPGVTREQVIAATGWAIRFADTVVVSEEPTEVELTA
LRDLEARTAAAHGQVAGEA

Sequences:

>Translated_259_residues
MTYSTSEMMTVAAARRLRNGSVCFVGIGLPSKAANLARLTSAPDVVLIYESGPIGAKPTVLPLSIGDGELAETADTVVST
SEIFRYWLQGGRVDVGFLGAAQVDRFGNINTTVVGDYHHPKVRLPGAGGAPEIAGSAKSVLIILKQSARSFVDKLDFITS
VGHGEGGDSRKRLGLPGAGPVGIITDLCIMEPEAGTHEFVVTTLHPGVTREQVIAATGWAIRFADTVVVSEEPTEVELTA
LRDLEARTAAAHGQVAGEA
>Mature_258_residues
TYSTSEMMTVAAARRLRNGSVCFVGIGLPSKAANLARLTSAPDVVLIYESGPIGAKPTVLPLSIGDGELAETADTVVSTS
EIFRYWLQGGRVDVGFLGAAQVDRFGNINTTVVGDYHHPKVRLPGAGGAPEIAGSAKSVLIILKQSARSFVDKLDFITSV
GHGEGGDSRKRLGLPGAGPVGIITDLCIMEPEAGTHEFVVTTLHPGVTREQVIAATGWAIRFADTVVVSEEPTEVELTAL
RDLEARTAAAHGQVAGEA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

None

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.6 [H]

Molecular weight: Translated: 27061; Mature: 26930

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYSTSEMMTVAAARRLRNGSVCFVGIGLPSKAANLARLTSAPDVVLIYESGPIGAKPTV
CCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEE
LPLSIGDGELAETADTVVSTSEIFRYWLQGGRVDVGFLGAAQVDRFGNINTTVVGDYHHP
EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCEEEEECCCCC
KVRLPGAGGAPEIAGSAKSVLIILKQSARSFVDKLDFITSVGHGEGGDSRKRLGLPGAGP
EEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
VGIITDLCIMEPEAGTHEFVVTTLHPGVTREQVIAATGWAIRFADTVVVSEEPTEVELTA
HHHHHHHHEECCCCCCCEEEEEEECCCCCHHHEEEECCCEEEEEEEEEECCCCCEEEEEE
LRDLEARTAAAHGQVAGEA
HHCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TYSTSEMMTVAAARRLRNGSVCFVGIGLPSKAANLARLTSAPDVVLIYESGPIGAKPTV
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEE
LPLSIGDGELAETADTVVSTSEIFRYWLQGGRVDVGFLGAAQVDRFGNINTTVVGDYHHP
EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCEEEEECCCCC
KVRLPGAGGAPEIAGSAKSVLIILKQSARSFVDKLDFITSVGHGEGGDSRKRLGLPGAGP
EEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
VGIITDLCIMEPEAGTHEFVVTTLHPGVTREQVIAATGWAIRFADTVVVSEEPTEVELTA
HHHHHHHHEECCCCCCCEEEEEEECCCCCHHHEEEECCCEEEEEEEEEECCCCCEEEEEE
LRDLEARTAAAHGQVAGEA
HHCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11741863 [H]