| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047195
Identifier: 66047195
GI number: 66047195
Start: 4715438
End: 4716952
Strand: Direct
Name: 66047195
Synonym: Psyr_3968
Alternate gene names: NA
Gene position: 4715438-4716952 (Clockwise)
Preceding gene: 66047194
Following gene: 66047196
Centisome position: 77.38
GC content: 62.71
Gene sequence:
>1515_bases ATGGATACTTTCGGTTATCTGGGCCAGGGCTTCGGTGTCGCCCTGACGCCTTACAACCTGATCACGGCGCTGTGCGGAAC ATTGATTGGTACTGTCGTCGGCCTGCTACCGGGGCTTGGACCGATCAACGGTGTCGCGCTGCTGATCCCTATCGCCTTCG CGCTGGGCCTGCCGCCCGAATCGGCGCTGATTCTGCTGGCAGCCGTGTACCTGGGCTGCGAATACGGCGGACGCATCAGC TCGATCCTGCTGAACATTCCGGGTGAAGCGTCCACCGTGATGACCACCCTGGACGGTTACCCGATGGCCCGCCAGGGCCT GGCCGGGGTCGCACTGTCGCTGTCGGCCTGGAGTTCGTTCATCGGCGCGTTCATCGCCACCTGCGGCATGGTGCTGTTCG CGCCGTTGCTCGCCAAATGGGCGATTGCTTTCGGTCCTGCGGAATACTTCGTGCTGATGGTGTTCGCGATCGTCTGCCTG GGCGGAATGGCCGGTGACCGGCCGTTGAAGACGTTCATTGCCGCGCTGATCGGGCTGTTCCTGTCTGCGGTCGGTATCGA TGCCAACAGCGGGGTGTACCGTTTCACGGGCGACAACATACACCTCACCGATGGCATTCAGTTCGTGGTGCTGGTGCTCG GCCTGTTTTCGATCAGCGAAATCCTCTTGCTGCTGGAGAAAACCCATCGCGGCCAGGAGGCAGTCAAGGCCACCGGGCGC ATGATGTTCAACGTCAAGGAAGCCGCTGCCGTGTTCGTGGTGAATATTCGCTGCGGTCTGCTGGGGTTCATCCTTGGCGT ATTGCCTGGCGCCGGTGCGACGCTGGCCAGCGCGGTCGCTTACATGACGGAAAAACGCATCGCCGGCGCTGGCGGCAAGT TCGGCCAGGGCGACATGCGTGGCCTGGCCGCACCCGAGACAGCCATCGGCGCGACGGCCTGCGGCGCCCTGGTGCCGATG CTGACGCTGGGCGTGCCCGGTTCAGGCACCACAGCGGTGATGATCGGCGCGTTGTCGCTGTACAACATCACGCCCGGCCC GATGCTGTTTCAGCAGCAGCCGGACATCGTCTGGGGCCTGATCGCGTCGTTGTTCATCGCCAACATCATGCTGGTGATCC TCAACATCCCGATGATTCGCATCTTCACGCGCATCCTTGCCGTGCCGAACTGGGCGCTGGTGCCGGTGATTGCGATCATC ACCGGCATCGGTGTGTATGCAGTGCACGCCACCACGTTCGACCTGTTCCTGATGGTCGGCATCGGTATCTTCGGTTACAT CCTGCGCAAGCTGGACTTCCCGCTGTCGCCGATCCTGCTCGGGTTCATCCTTGGTGGCCTGATGGAGCAGAACCTGCGTC GTGCCCTGTCGATCTCCAACGGCGAACTGGGGATCCTCTGGTCCAGCCCGATTACCCTTGGCGTCTGGGTGGTGACCGTG TTCATGCTGCTGTTCCCGCTGCTGCGCATCTGGCGCAAGCGCGCCAAACAGCAGGCTGCTGCGACGCATGGCTGA
Upstream 100 bases:
>100_bases GTGGTGGTGATTCTGATGAGCGTCGGCCTGTACCTGCTGTTCGACAAGGCCATGGACGTCCCCTTGCCTTTGGGCCTGCT CAGCGTTCTGGAGAATTAAA
Downstream 100 bases:
>100_bases TTCCTCTCTGCGCCAATGGTGGGCAACACCGTTGATCGGCCTGCTGGGCGGCTACCTCGCCAGCCAGGTCGGCTGGCCGT TGCCGTGGATGGTGGGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MDTFGYLGQGFGVALTPYNLITALCGTLIGTVVGLLPGLGPINGVALLIPIAFALGLPPESALILLAAVYLGCEYGGRIS SILLNIPGEASTVMTTLDGYPMARQGLAGVALSLSAWSSFIGAFIATCGMVLFAPLLAKWAIAFGPAEYFVLMVFAIVCL GGMAGDRPLKTFIAALIGLFLSAVGIDANSGVYRFTGDNIHLTDGIQFVVLVLGLFSISEILLLLEKTHRGQEAVKATGR MMFNVKEAAAVFVVNIRCGLLGFILGVLPGAGATLASAVAYMTEKRIAGAGGKFGQGDMRGLAAPETAIGATACGALVPM LTLGVPGSGTTAVMIGALSLYNITPGPMLFQQQPDIVWGLIASLFIANIMLVILNIPMIRIFTRILAVPNWALVPVIAII TGIGVYAVHATTFDLFLMVGIGIFGYILRKLDFPLSPILLGFILGGLMEQNLRRALSISNGELGILWSSPITLGVWVVTV FMLLFPLLRIWRKRAKQQAAATHG
Sequences:
>Translated_504_residues MDTFGYLGQGFGVALTPYNLITALCGTLIGTVVGLLPGLGPINGVALLIPIAFALGLPPESALILLAAVYLGCEYGGRIS SILLNIPGEASTVMTTLDGYPMARQGLAGVALSLSAWSSFIGAFIATCGMVLFAPLLAKWAIAFGPAEYFVLMVFAIVCL GGMAGDRPLKTFIAALIGLFLSAVGIDANSGVYRFTGDNIHLTDGIQFVVLVLGLFSISEILLLLEKTHRGQEAVKATGR MMFNVKEAAAVFVVNIRCGLLGFILGVLPGAGATLASAVAYMTEKRIAGAGGKFGQGDMRGLAAPETAIGATACGALVPM LTLGVPGSGTTAVMIGALSLYNITPGPMLFQQQPDIVWGLIASLFIANIMLVILNIPMIRIFTRILAVPNWALVPVIAII TGIGVYAVHATTFDLFLMVGIGIFGYILRKLDFPLSPILLGFILGGLMEQNLRRALSISNGELGILWSSPITLGVWVVTV FMLLFPLLRIWRKRAKQQAAATHG >Mature_504_residues MDTFGYLGQGFGVALTPYNLITALCGTLIGTVVGLLPGLGPINGVALLIPIAFALGLPPESALILLAAVYLGCEYGGRIS SILLNIPGEASTVMTTLDGYPMARQGLAGVALSLSAWSSFIGAFIATCGMVLFAPLLAKWAIAFGPAEYFVLMVFAIVCL GGMAGDRPLKTFIAALIGLFLSAVGIDANSGVYRFTGDNIHLTDGIQFVVLVLGLFSISEILLLLEKTHRGQEAVKATGR MMFNVKEAAAVFVVNIRCGLLGFILGVLPGAGATLASAVAYMTEKRIAGAGGKFGQGDMRGLAAPETAIGATACGALVPM LTLGVPGSGTTAVMIGALSLYNITPGPMLFQQQPDIVWGLIASLFIANIMLVILNIPMIRIFTRILAVPNWALVPVIAII TGIGVYAVHATTFDLFLMVGIGIFGYILRKLDFPLSPILLGFILGGLMEQNLRRALSISNGELGILWSSPITLGVWVVTV FMLLFPLLRIWRKRAKQQAAATHG
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52888; Mature: 52888
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTFGYLGQGFGVALTPYNLITALCGTLIGTVVGLLPGLGPINGVALLIPIAFALGLPPE CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH SALILLAAVYLGCEYGGRISSILLNIPGEASTVMTTLDGYPMARQGLAGVALSLSAWSSF HHHHHHHHHHHHCCCCCCHHHHEEECCCCHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHH IGAFIATCGMVLFAPLLAKWAIAFGPAEYFVLMVFAIVCLGGMAGDRPLKTFIAALIGLF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LSAVGIDANSGVYRFTGDNIHLTDGIQFVVLVLGLFSISEILLLLEKTHRGQEAVKATGR HHHHCCCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH MMFNVKEAAAVFVVNIRCGLLGFILGVLPGAGATLASAVAYMTEKRIAGAGGKFGQGDMR HHEEEHHHHEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC GLAAPETAIGATACGALVPMLTLGVPGSGTTAVMIGALSLYNITPGPMLFQQQPDIVWGL CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH IASLFIANIMLVILNIPMIRIFTRILAVPNWALVPVIAIITGIGVYAVHATTFDLFLMVG HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGIFGYILRKLDFPLSPILLGFILGGLMEQNLRRALSISNGELGILWSSPITLGVWVVTV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH FMLLFPLLRIWRKRAKQQAAATHG HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDTFGYLGQGFGVALTPYNLITALCGTLIGTVVGLLPGLGPINGVALLIPIAFALGLPPE CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH SALILLAAVYLGCEYGGRISSILLNIPGEASTVMTTLDGYPMARQGLAGVALSLSAWSSF HHHHHHHHHHHHCCCCCCHHHHEEECCCCHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHH IGAFIATCGMVLFAPLLAKWAIAFGPAEYFVLMVFAIVCLGGMAGDRPLKTFIAALIGLF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LSAVGIDANSGVYRFTGDNIHLTDGIQFVVLVLGLFSISEILLLLEKTHRGQEAVKATGR HHHHCCCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH MMFNVKEAAAVFVVNIRCGLLGFILGVLPGAGATLASAVAYMTEKRIAGAGGKFGQGDMR HHEEEHHHHEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC GLAAPETAIGATACGALVPMLTLGVPGSGTTAVMIGALSLYNITPGPMLFQQQPDIVWGL CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH IASLFIANIMLVILNIPMIRIFTRILAVPNWALVPVIAIITGIGVYAVHATTFDLFLMVG HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGIFGYILRKLDFPLSPILLGFILGGLMEQNLRRALSISNGELGILWSSPITLGVWVVTV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH FMLLFPLLRIWRKRAKQQAAATHG HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]