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The map label for this gene is 66047158

Identifier: 66047158

GI number: 66047158

Start: 4676822

End: 4678018

Strand: Reverse

Name: 66047158

Synonym: Psyr_3931

Alternate gene names: NA

Gene position: 4678018-4676822 (Counterclockwise)

Preceding gene: 66047159

Following gene: 66047156

Centisome position: 76.77

GC content: 63.49

Gene sequence:

>1197_bases
ATGACCATCACCTTGCGTGTGCTGGGCACCTCCGTGACCCTGCTGGAGTCTTTGCGTGAGCGGGCCGAGCAGGAACTGGG
GATCAAGCTGGTCTACCAGATTCACGACGTGCAAACCGCGCAACGCATCGCGGTCATGCAGCCAGACAGCTACGACCTTT
ACGATCAGTGGTTTCATAACGTCGATTTCGTCTGGCCTGCGCGGGCGATTCAACCCATCGACACGCGGCGCATCGCGCTG
TGGCACGAAATCAACGACCTGCCCAAGCAGGGCCGGCTGCGGCCTACCGATCAGCCGGGTAGCGGCAGTGTGCCCAGCGA
GCGTTTGTTCGTGCAGCACGACGGCAGCCTGGGCAGTGCGGTGACCGAGCGCATCAGCATGTTGCCGCTGACCCATAACG
CCGACAGCTTCGCCTATCGCCCCGAGCGTTTGCCGGAGGGCTTGAGCTCTGCGGACGAAAGCTGGGGCTGGTTGCTCGAC
CCTGTATGGGGCGGACGCATCGCCTTGCAGAGTGACGCGGCCATCGGCGCGCTGGATGCCGCCCTGGCTGTGCAGGGGGC
GGGGCTGGCGAGCTTCAAGGACATCGGCAACATGAGCATCGAAGAGATCGATCGGCTCGCTGATGTGCTGGTGCGCAAAC
AGCAGCAAGGGCATTTTGGTGCGTTCTGGTCAGGTGACGAAGAAGCCGCCGAACTGATGCTCAGCCCGAACATCGATATT
CAGAGCCTCTGGTCACCGACCCTGGTCAGACTGCACCGTGCGGGGGTCAAGTACCGCGTGGCGGTGCCCAAGGAAGGTTA
TCGCGGCTGGTTTGGCGGGCTTTCCTTGTCACGTCACGCCAAGGGCCCGGTGCTGGATGCCGCCTATGCGTACCTGAACT
GGTGGCTGTCGGGCTGGCCCGGCGCAGTGATGGCGCGGCAGGGCTATTACATTGGCAATCCGGCACGCAGCCGTGATCAC
CTCAGCGCTGCCGAATGGGATTACTGGTACGCCGGCCTGCCTGCCCGCGAACAACTGCTCGGCAGCGACGGCTTGCCGCT
GATCGACGCCGGAGAAGTCCGCGACGGCGGCTCCTACGAAGAACGCATGGGCCACATCGCCGTGTGGAACTCGGTCATGA
ACGAGCACAACTACCTGGTCCGCCGCTGGAACGACATCCTGCGCGCCAGTGACAAAAGCAGCGCCAAAGCGCGCTAG

Upstream 100 bases:

>100_bases
GGCTGGTGTTCATCCTGCGCGGTCTCGATCCCGATCTGCTGCGTCGTTCGTTTGAAGTCTTCTCCGGCAGTTTCGCGCCG
CCGCTCGGCGAGTCGTCAGC

Downstream 100 bases:

>100_bases
CCATACGCACTGGGGAGCGGACGCAGGACGTGCGCAACGATAGTCGTGTGAACCCTATCGTGCCAATGCTCCGCGTTGGC
ATGCCTTTCGTGACGCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Spermidine/Putrescine ABC Transporter; Signal Peptide Prediction; Tat Pathway Signal Sequence Domain Protein; Signal Peptide; Conserved Protein

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTITLRVLGTSVTLLESLRERAEQELGIKLVYQIHDVQTAQRIAVMQPDSYDLYDQWFHNVDFVWPARAIQPIDTRRIAL
WHEINDLPKQGRLRPTDQPGSGSVPSERLFVQHDGSLGSAVTERISMLPLTHNADSFAYRPERLPEGLSSADESWGWLLD
PVWGGRIALQSDAAIGALDAALAVQGAGLASFKDIGNMSIEEIDRLADVLVRKQQQGHFGAFWSGDEEAAELMLSPNIDI
QSLWSPTLVRLHRAGVKYRVAVPKEGYRGWFGGLSLSRHAKGPVLDAAYAYLNWWLSGWPGAVMARQGYYIGNPARSRDH
LSAAEWDYWYAGLPAREQLLGSDGLPLIDAGEVRDGGSYEERMGHIAVWNSVMNEHNYLVRRWNDILRASDKSSAKAR

Sequences:

>Translated_398_residues
MTITLRVLGTSVTLLESLRERAEQELGIKLVYQIHDVQTAQRIAVMQPDSYDLYDQWFHNVDFVWPARAIQPIDTRRIAL
WHEINDLPKQGRLRPTDQPGSGSVPSERLFVQHDGSLGSAVTERISMLPLTHNADSFAYRPERLPEGLSSADESWGWLLD
PVWGGRIALQSDAAIGALDAALAVQGAGLASFKDIGNMSIEEIDRLADVLVRKQQQGHFGAFWSGDEEAAELMLSPNIDI
QSLWSPTLVRLHRAGVKYRVAVPKEGYRGWFGGLSLSRHAKGPVLDAAYAYLNWWLSGWPGAVMARQGYYIGNPARSRDH
LSAAEWDYWYAGLPAREQLLGSDGLPLIDAGEVRDGGSYEERMGHIAVWNSVMNEHNYLVRRWNDILRASDKSSAKAR
>Mature_397_residues
TITLRVLGTSVTLLESLRERAEQELGIKLVYQIHDVQTAQRIAVMQPDSYDLYDQWFHNVDFVWPARAIQPIDTRRIALW
HEINDLPKQGRLRPTDQPGSGSVPSERLFVQHDGSLGSAVTERISMLPLTHNADSFAYRPERLPEGLSSADESWGWLLDP
VWGGRIALQSDAAIGALDAALAVQGAGLASFKDIGNMSIEEIDRLADVLVRKQQQGHFGAFWSGDEEAAELMLSPNIDIQ
SLWSPTLVRLHRAGVKYRVAVPKEGYRGWFGGLSLSRHAKGPVLDAAYAYLNWWLSGWPGAVMARQGYYIGNPARSRDHL
SAAEWDYWYAGLPAREQLLGSDGLPLIDAGEVRDGGSYEERMGHIAVWNSVMNEHNYLVRRWNDILRASDKSSAKAR

Specific function: Unknown

COG id: COG0687

COG function: function code E; Spermidine/putrescine-binding periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44498; Mature: 44366

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITLRVLGTSVTLLESLRERAEQELGIKLVYQIHDVQTAQRIAVMQPDSYDLYDQWFHN
CEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHEEEECCCCCCHHHHHHCC
VDFVWPARAIQPIDTRRIALWHEINDLPKQGRLRPTDQPGSGSVPSERLFVQHDGSLGSA
CCEECCHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH
VTERISMLPLTHNADSFAYRPERLPEGLSSADESWGWLLDPVWGGRIALQSDAAIGALDA
HHHHHHHCEEECCCCCCCCCHHHHHCHHHCCCCCCCEEECCCCCCEEEEECCCCHHHHHH
ALAVQGAGLASFKDIGNMSIEEIDRLADVLVRKQQQGHFGAFWSGDEEAAELMLSPNIDI
HHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHEEECCCCCH
QSLWSPTLVRLHRAGVKYRVAVPKEGYRGWFGGLSLSRHAKGPVLDAAYAYLNWWLSGWP
HHHCCHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GAVMARQGYYIGNPARSRDHLSAAEWDYWYAGLPAREQLLGSDGLPLIDAGEVRDGGSYE
CHHEEECCEEECCCCCCCCCCCCCCCCCEECCCCHHHHHHCCCCCCEEECCCCCCCCCHH
ERMGHIAVWNSVMNEHNYLVRRWNDILRASDKSSAKAR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TITLRVLGTSVTLLESLRERAEQELGIKLVYQIHDVQTAQRIAVMQPDSYDLYDQWFHN
EEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHEEEECCCCCCHHHHHHCC
VDFVWPARAIQPIDTRRIALWHEINDLPKQGRLRPTDQPGSGSVPSERLFVQHDGSLGSA
CCEECCHHHCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH
VTERISMLPLTHNADSFAYRPERLPEGLSSADESWGWLLDPVWGGRIALQSDAAIGALDA
HHHHHHHCEEECCCCCCCCCHHHHHCHHHCCCCCCCEEECCCCCCEEEEECCCCHHHHHH
ALAVQGAGLASFKDIGNMSIEEIDRLADVLVRKQQQGHFGAFWSGDEEAAELMLSPNIDI
HHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHEEECCCCCH
QSLWSPTLVRLHRAGVKYRVAVPKEGYRGWFGGLSLSRHAKGPVLDAAYAYLNWWLSGWP
HHHCCHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
GAVMARQGYYIGNPARSRDHLSAAEWDYWYAGLPAREQLLGSDGLPLIDAGEVRDGGSYE
CHHEEECCEEECCCCCCCCCCCCCCCCCEECCCCHHHHHHCCCCCCEEECCCCCCCCCHH
ERMGHIAVWNSVMNEHNYLVRRWNDILRASDKSSAKAR
HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA