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The map label for this gene is glpD [H]

Identifier: 66047134

GI number: 66047134

Start: 4649268

End: 4650806

Strand: Direct

Name: glpD [H]

Synonym: Psyr_3907

Alternate gene names: 66047134

Gene position: 4649268-4650806 (Clockwise)

Preceding gene: 66047133

Following gene: 66047135

Centisome position: 76.3

GC content: 60.3

Gene sequence:

>1539_bases
ATGCCCCACACCAACGTGCCAACCCCGCCCCTCTCAGAGGTTTACGACATTGCCGTTATTGGCGGTGGCATCAACGGTGT
CGGCATTGCAGCGGATGCCGCCGGTCGCGGCCTTTCGGTTTTTCTGTGCGAAAAGGACGACCTGGCCAGCCACACGTCCT
CGGCCAGCAGCAAGCTGATCCATGGTGGCTTGCGCTATCTGGAGCATTACGAGTTCCGCCTTGTGCGTGAGGCCCTGGCA
GAACGCGAAGTGCTGCTTGCCAAAGCACCGCACATCGTCAAGCCAATGCGCTTTGTGCTGCCTCATCGTCCGCACCTGCG
TCCGGCCTGGATGATTCGCGCCGGGATGTTCCTGTACGACAACCTCGGCAAGCGCGAAAAGCTGCCGGCATCGCGAACCA
TTCATTTCGGTGCGGACAGCCCGCTCAACCCGAGCATCACCCGCGGTTTCGAATATTCCGACTGCTGGGTCGACGACGCG
CGTCTGGTCGTGCTCAACGCCATGTCCGCTCGTGAGAACGGTGCGCACATTCATACTCAGACCCGCTGTGTCAGCGCCCG
CCGTATCAAGGGCATGTGGCATCTGCATCTGGAGCGCAGCGACGGCAGCCTGTTTTCGATCCATGCCAAGGCATTGGTCA
ATGCGGCAGGCCCGTGGGTGGCCAAGTTCATCCGTGAAGACCTCAAGCTCGACTCGGCTTACGGCATCCGCCTGATTCAG
GGCAGCCACCTGATCGTGCCGAAACTGTACGAAGGTGAGCACGCGTTCATTCTGCAGAACGAAGACAAGCGCATCGTGTT
CACGATTCCGTACCTGGAGCACTTCACTATCGTCGGCACCACCGACCGTGAGTATCAGGGCGATCCGAACAAGGTGGATA
TCACTGAAGGCGAGATGGATTACGTGCTGAAAGTGGCCAACGACCACTTCAAGAAACAGTTGAGTCGCGCAGACGTGCTC
CACACGTTCTCTGGCGTGCGCCCGCTGTGCAACGACGAGTCCGATAATCCGTCTGCCATCACCCGTGATTACACGCTTTC
GTTGTCAGGCGGCGCTGACGAAGCGCCGATTCTGTCGGTGTTCGGCGGCAAGCTGACCACGTACCGCAAACTGGCCGAGT
CAGCGATGGCGCAGTTGGCACCGTTCTTCAAACAGATGAAACCGAGCTGGACGGCCAAGGCTGCCCTGCCGGGTGGCGAA
GACATGACCACCGCCGAAGCGCTGGCAACAGAAATGACCCGCCGCTGCAGCTGGCTGCCAGCCCCTATCGCCAAACGCTG
GTCGATCACCTACGGCAGCCGCAGCTGGCGCTTGCTGGAGGGTGCGCAAAGCCTGGAAGACCTTGGTCAGCATTTGGGGG
CAGGCCTGTATACCCGCGAGGTCGATTACCTGTGCGACCAGGAATGGGCCACCAGCATCGAAGACATCCTGTGGCGCCGC
ACCAAGCTTGGTCTGTTCACGACGCCTGAGGAACAGGCTGCCGTGAGCAGCTACCTGGAAACAGTGGTGCGCAACAAAGC
CTCTTTCGAAGCGGCCTGA

Upstream 100 bases:

>100_bases
TGGCAACGGTCATTTTATTGAGCTATGATTTTCGGAAATGAACATTAATGTTCAGATTCGCCTTTCGAGCACTGCTCACG
AATTGTCCAGGAGGCCACCA

Downstream 100 bases:

>100_bases
TCATCCGCGTGCAACCTGTTCACCCATCGCGCGGTGAACAGGCTTCTCTACTTGCTGCCCTCTTCCTGCACAACCCCTTC
CATTCGGTTTTCCGAACAAT

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MPHTNVPTPPLSEVYDIAVIGGGINGVGIAADAAGRGLSVFLCEKDDLASHTSSASSKLIHGGLRYLEHYEFRLVREALA
EREVLLAKAPHIVKPMRFVLPHRPHLRPAWMIRAGMFLYDNLGKREKLPASRTIHFGADSPLNPSITRGFEYSDCWVDDA
RLVVLNAMSARENGAHIHTQTRCVSARRIKGMWHLHLERSDGSLFSIHAKALVNAAGPWVAKFIREDLKLDSAYGIRLIQ
GSHLIVPKLYEGEHAFILQNEDKRIVFTIPYLEHFTIVGTTDREYQGDPNKVDITEGEMDYVLKVANDHFKKQLSRADVL
HTFSGVRPLCNDESDNPSAITRDYTLSLSGGADEAPILSVFGGKLTTYRKLAESAMAQLAPFFKQMKPSWTAKAALPGGE
DMTTAEALATEMTRRCSWLPAPIAKRWSITYGSRSWRLLEGAQSLEDLGQHLGAGLYTREVDYLCDQEWATSIEDILWRR
TKLGLFTTPEEQAAVSSYLETVVRNKASFEAA

Sequences:

>Translated_512_residues
MPHTNVPTPPLSEVYDIAVIGGGINGVGIAADAAGRGLSVFLCEKDDLASHTSSASSKLIHGGLRYLEHYEFRLVREALA
EREVLLAKAPHIVKPMRFVLPHRPHLRPAWMIRAGMFLYDNLGKREKLPASRTIHFGADSPLNPSITRGFEYSDCWVDDA
RLVVLNAMSARENGAHIHTQTRCVSARRIKGMWHLHLERSDGSLFSIHAKALVNAAGPWVAKFIREDLKLDSAYGIRLIQ
GSHLIVPKLYEGEHAFILQNEDKRIVFTIPYLEHFTIVGTTDREYQGDPNKVDITEGEMDYVLKVANDHFKKQLSRADVL
HTFSGVRPLCNDESDNPSAITRDYTLSLSGGADEAPILSVFGGKLTTYRKLAESAMAQLAPFFKQMKPSWTAKAALPGGE
DMTTAEALATEMTRRCSWLPAPIAKRWSITYGSRSWRLLEGAQSLEDLGQHLGAGLYTREVDYLCDQEWATSIEDILWRR
TKLGLFTTPEEQAAVSSYLETVVRNKASFEAA
>Mature_511_residues
PHTNVPTPPLSEVYDIAVIGGGINGVGIAADAAGRGLSVFLCEKDDLASHTSSASSKLIHGGLRYLEHYEFRLVREALAE
REVLLAKAPHIVKPMRFVLPHRPHLRPAWMIRAGMFLYDNLGKREKLPASRTIHFGADSPLNPSITRGFEYSDCWVDDAR
LVVLNAMSARENGAHIHTQTRCVSARRIKGMWHLHLERSDGSLFSIHAKALVNAAGPWVAKFIREDLKLDSAYGIRLIQG
SHLIVPKLYEGEHAFILQNEDKRIVFTIPYLEHFTIVGTTDREYQGDPNKVDITEGEMDYVLKVANDHFKKQLSRADVLH
TFSGVRPLCNDESDNPSAITRDYTLSLSGGADEAPILSVFGGKLTTYRKLAESAMAQLAPFFKQMKPSWTAKAALPGGED
MTTAEALATEMTRRCSWLPAPIAKRWSITYGSRSWRLLEGAQSLEDLGQHLGAGLYTREVDYLCDQEWATSIEDILWRRT
KLGLFTTPEEQAAVSSYLETVVRNKASFEAA

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=534, Percent_Identity=29.5880149812734, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI285002231, Length=534, Percent_Identity=29.5880149812734, Blast_Score=176, Evalue=5e-44,
Organism=Escherichia coli, GI2367226, Length=473, Percent_Identity=55.8139534883721, Blast_Score=543, Evalue=1e-156,
Organism=Escherichia coli, GI1788574, Length=495, Percent_Identity=27.4747474747475, Blast_Score=107, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI115534726, Length=507, Percent_Identity=30.7692307692308, Blast_Score=157, Evalue=9e-39,
Organism=Caenorhabditis elegans, GI17509253, Length=512, Percent_Identity=28.125, Blast_Score=136, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6322036, Length=552, Percent_Identity=26.268115942029, Blast_Score=140, Evalue=6e-34,
Organism=Drosophila melanogaster, GI161077125, Length=525, Percent_Identity=27.6190476190476, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24653942, Length=525, Percent_Identity=27.6190476190476, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24653944, Length=525, Percent_Identity=27.6190476190476, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI20130025, Length=525, Percent_Identity=27.6190476190476, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24586295, Length=515, Percent_Identity=26.9902912621359, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI19921278, Length=505, Percent_Identity=24.7524752475248, Blast_Score=90, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 57043; Mature: 56911

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTNVPTPPLSEVYDIAVIGGGINGVGIAADAAGRGLSVFLCEKDDLASHTSSASSKLI
CCCCCCCCCCHHHHEEEEEECCCCCCCEEEECCCCCCCEEEEECCCHHHHHCCHHHHHHH
HGGLRYLEHYEFRLVREALAEREVLLAKAPHIVKPMRFVLPHRPHLRPAWMIRAGMFLYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
NLGKREKLPASRTIHFGADSPLNPSITRGFEYSDCWVDDARLVVLNAMSARENGAHIHTQ
CCCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCEECCCEEEEEEEHHCCCCCCEEEEH
TRCVSARRIKGMWHLHLERSDGSLFSIHAKALVNAAGPWVAKFIREDLKLDSAYGIRLIQ
HHHHHHHHHCCEEEEEEECCCCCEEEEEHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEE
GSHLIVPKLYEGEHAFILQNEDKRIVFTIPYLEHFTIVGTTDREYQGDPNKVDITEGEMD
CCEEEEEEEECCCEEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEECCCCHH
YVLKVANDHFKKQLSRADVLHTFSGVRPLCNDESDNPSAITRDYTLSLSGGADEAPILSV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHH
FGGKLTTYRKLAESAMAQLAPFFKQMKPSWTAKAALPGGEDMTTAEALATEMTRRCSWLP
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCC
APIAKRWSITYGSRSWRLLEGAQSLEDLGQHLGAGLYTREVDYLCDQEWATSIEDILWRR
CCCHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHH
TKLGLFTTPEEQAAVSSYLETVVRNKASFEAA
HHCCEEECCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PHTNVPTPPLSEVYDIAVIGGGINGVGIAADAAGRGLSVFLCEKDDLASHTSSASSKLI
CCCCCCCCCHHHHEEEEEECCCCCCCEEEECCCCCCCEEEEECCCHHHHHCCHHHHHHH
HGGLRYLEHYEFRLVREALAEREVLLAKAPHIVKPMRFVLPHRPHLRPAWMIRAGMFLYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
NLGKREKLPASRTIHFGADSPLNPSITRGFEYSDCWVDDARLVVLNAMSARENGAHIHTQ
CCCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCEECCCEEEEEEEHHCCCCCCEEEEH
TRCVSARRIKGMWHLHLERSDGSLFSIHAKALVNAAGPWVAKFIREDLKLDSAYGIRLIQ
HHHHHHHHHCCEEEEEEECCCCCEEEEEHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEE
GSHLIVPKLYEGEHAFILQNEDKRIVFTIPYLEHFTIVGTTDREYQGDPNKVDITEGEMD
CCEEEEEEEECCCEEEEEECCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEECCCCHH
YVLKVANDHFKKQLSRADVLHTFSGVRPLCNDESDNPSAITRDYTLSLSGGADEAPILSV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHH
FGGKLTTYRKLAESAMAQLAPFFKQMKPSWTAKAALPGGEDMTTAEALATEMTRRCSWLP
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCC
APIAKRWSITYGSRSWRLLEGAQSLEDLGQHLGAGLYTREVDYLCDQEWATSIEDILWRR
CCCHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHH
TKLGLFTTPEEQAAVSSYLETVVRNKASFEAA
HHCCEEECCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA