| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is quiP [H]
Identifier: 66047098
GI number: 66047098
Start: 4609176
End: 4611650
Strand: Direct
Name: quiP [H]
Synonym: Psyr_3871
Alternate gene names: 66047098
Gene position: 4609176-4611650 (Clockwise)
Preceding gene: 66047097
Following gene: 66047099
Centisome position: 75.64
GC content: 62.14
Gene sequence:
>2475_bases ATGGCCTCGCCAGCCCTTCGTCATTTTCTACCCCGATTCGGCGCTGCCGCTGCTGCGGCGAGCTTCCTGAGCCTTGCCGG CTGCCAGTTGGGCGGCAACGATCCCGAGACCGTGCTGCCTGTTTCCGGGACGTTCCCGCTCAAGGGGCTGGCGCAGAACG TTTCCGTGCGCCGCAACAACATGGGCATGCCGCTGATAGAAAGCAGCAGCTACCACGATGCACTGTTCACGCTGGGCTAC GTTCATGCCGGTGATCGAATCAGTCAGATGCTCGGCATGCGCCTGCTGGCGCAGGGCCGTTTGTCGGAAATGGCCGGCGC GGATGCGCTGGACGTCGACCGTCTGATGCGCTCGGTCAACCTCAAGCAGAACGCCAGCGACCTGTACAACGCCGCTTCGC CGCGTTTGAAACGCTTCTTCGATGTCTATGCGCGCGGCGTGAACGCCTACCTGTTCCGTTATCGCGATAAGCTGCCTGCC GATATCGCCAGCTCGGGCTACAAGCCGGAATACTGGAAGCCGGAAGACTCGGCGCTGATCTTCAGCCTGCTCAACTTCAG CCTGTCGGTCAACCTGCAGGAAGAGCTGTCGGCGCTGGTCCTGGCGCAGAAAGTCAGCGCGGACAAGCTCGCCTGGCTAC TGCCGACCTACCCTGACGAAGAATTACCATTTGCCGAAGCCGACAAGCTCAAGGGCCTGAACCTGAACAATCAGGTCACC GGCCTGAGCGATCTGAACAGGATCGCCCTGCAGCTCTCGGACCTGAACATGCTCGGCGTCGCGGCCTCCAGCAACTGGGC CATCGCGCCACAACGCAGTCGCAACGGCAAAAGTCTGCTGGCCAGTGACATGCAACTGCCCGCCGGGCTCAATTCTGCCT GGAGCTTCGTGCAGATCCGTGCACCGAAATACCAGGTGTCCGGTGTCACCATCGCCGGTATGCCACTGGTACTCAGCGGT TTCAACGGCAAACTGGCGTGGAGCATGAGCAACGTCAAGGGCGACAATCAGGATCTGTTTCTGGAGAAGATCAAGCGCGA AGGCAACCGCGTTTCCTACATGGTTGACGGCAAATGGCTGCCAGCGGCGGCCCATCAGGAAACCTTTCTGGTCAAGGGCG GCAGCCCGCTGCGTGAAACCGTGTACGAAACCCGCCACGGCGCGCTGCTCAACGCCTCTGCAACCCCGCCCGGCAACGGT TTGAGCCTGGCGCTGCAAGTCCCGAACTTCAAGGATGACAAGAGCCTGGATGCGTTCTTCGATCTGTCCCGTGCACCTAA CGTCGAGAAAGCCTTCGACACCAGCCGCGAGATTCGGGCGATCACCCTGAACATGATCTTTGCCGACGCCTCGAACATTG GCTGGCAGGTCACTGGCCGCTTCCCGAACCGCCGCGAAGGCCAGGGCCTGCTGCCTTCGCCGGGCTGGGATGGCAAGTAC GACTGGGACGGTTTTGCCGACTCGATGCTTCATCCCTATGATCAGGACCCGCGCCAAGGCTGGCTCGCCGCGGCCAATCA GCGCACGATTCCGAAAGGCTACGGCATGCAGCTCTCCAACTCGTGGGGCTACCCGGAGCGCGCCGAGCGAATTGCCGAAC TGGCCAACGGGGGCAAGCAGGACCTGCGCAGCACCATCGCCATGCAATACGACCAGACCACGACGTTCGCCGCCAAGCTC AAGAGCATGTTTCAGGCGCCCGGCATGAGCAAGCCGCTCAAGCAGGCCATTGATGCACTGCCAGAAGCCGATCGCAACAA GGCCCGCGAAGCGTTCACGCGCCTGATGGCGTTCGATGGCAAGCTCAGCGCTACTTCAGCTGATGCGGCGCTGTACGAGT TGTTTCTGCAGGAAAGCGCCAAGCAGATTTTCCTTGATGAGTTGGGTCCGGAGACCAGCCCTGCCTGGCAGGCACTGGTC GCCAACGCCAGTTCGTCCTACTCGCCACAGGCCGACCACTTGCTGGGTCGCGATGACAGCCCCTATTGGGATGACGTCAA AACCCCGCAGAAGGAAGACAAACCGGCCATCCTCGCGCGCAGTCTGGCGGCCGCCATCACCAGCGGCGACAGCCTGTTGG GCAGCGATCACAAGGCCTGGCAATGGGGCAAGCTGCACCGTGACAACTGGGCCTCGACCAGCCCGCTGGCCAAGCAGTTG GGTGGCGGCGAGTTCAACCGGGGCGCCACGCCGACGGGCGGTGATCACACGACGCTGAACGTATCCGGCTTCGAGTGGGG CAAGGGCTTCGACGCCCGCATGGCACCGGGTCTGCGCATGATCGTAGACTTCAGCCTGGTCGAACCGATGACCGGCCTGA TCAGCACCGGCCAATCCGGCAACCCGGCCAGCCCGTACTACGCCAACAGCATCGAGCCGTGGCAGAAAGGCCAGTACCAG TCGATTCCGGTGCAACAACAGAACTACGAAAAGGGCTACGGCAAACAGCGCCTGACGCTGACGCCGGGCAAGTAA
Upstream 100 bases:
>100_bases CTGCAAAATCCTGAAATAAACTGCCCCGTGCCGCTTGCGTGCGGCTTGCCTGCTCTCTAACGTAGCGGCTTTTGTACGTT ACCCCTCCAGGAGCTTGCCC
Downstream 100 bases:
>100_bases GCGCCGAAAACCGGACGCAGAGGGAGCATGGGCACGATGGTGTTCTTCAGTACACCTATCGTTCCCACGCTCCAGCGTGG TAATGCAGTTCGTGACGCTC
Product: penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 824; Mature: 823
Protein sequence:
>824_residues MASPALRHFLPRFGAAAAAASFLSLAGCQLGGNDPETVLPVSGTFPLKGLAQNVSVRRNNMGMPLIESSSYHDALFTLGY VHAGDRISQMLGMRLLAQGRLSEMAGADALDVDRLMRSVNLKQNASDLYNAASPRLKRFFDVYARGVNAYLFRYRDKLPA DIASSGYKPEYWKPEDSALIFSLLNFSLSVNLQEELSALVLAQKVSADKLAWLLPTYPDEELPFAEADKLKGLNLNNQVT GLSDLNRIALQLSDLNMLGVAASSNWAIAPQRSRNGKSLLASDMQLPAGLNSAWSFVQIRAPKYQVSGVTIAGMPLVLSG FNGKLAWSMSNVKGDNQDLFLEKIKREGNRVSYMVDGKWLPAAAHQETFLVKGGSPLRETVYETRHGALLNASATPPGNG LSLALQVPNFKDDKSLDAFFDLSRAPNVEKAFDTSREIRAITLNMIFADASNIGWQVTGRFPNRREGQGLLPSPGWDGKY DWDGFADSMLHPYDQDPRQGWLAAANQRTIPKGYGMQLSNSWGYPERAERIAELANGGKQDLRSTIAMQYDQTTTFAAKL KSMFQAPGMSKPLKQAIDALPEADRNKAREAFTRLMAFDGKLSATSADAALYELFLQESAKQIFLDELGPETSPAWQALV ANASSSYSPQADHLLGRDDSPYWDDVKTPQKEDKPAILARSLAAAITSGDSLLGSDHKAWQWGKLHRDNWASTSPLAKQL GGGEFNRGATPTGGDHTTLNVSGFEWGKGFDARMAPGLRMIVDFSLVEPMTGLISTGQSGNPASPYYANSIEPWQKGQYQ SIPVQQQNYEKGYGKQRLTLTPGK
Sequences:
>Translated_824_residues MASPALRHFLPRFGAAAAAASFLSLAGCQLGGNDPETVLPVSGTFPLKGLAQNVSVRRNNMGMPLIESSSYHDALFTLGY VHAGDRISQMLGMRLLAQGRLSEMAGADALDVDRLMRSVNLKQNASDLYNAASPRLKRFFDVYARGVNAYLFRYRDKLPA DIASSGYKPEYWKPEDSALIFSLLNFSLSVNLQEELSALVLAQKVSADKLAWLLPTYPDEELPFAEADKLKGLNLNNQVT GLSDLNRIALQLSDLNMLGVAASSNWAIAPQRSRNGKSLLASDMQLPAGLNSAWSFVQIRAPKYQVSGVTIAGMPLVLSG FNGKLAWSMSNVKGDNQDLFLEKIKREGNRVSYMVDGKWLPAAAHQETFLVKGGSPLRETVYETRHGALLNASATPPGNG LSLALQVPNFKDDKSLDAFFDLSRAPNVEKAFDTSREIRAITLNMIFADASNIGWQVTGRFPNRREGQGLLPSPGWDGKY DWDGFADSMLHPYDQDPRQGWLAAANQRTIPKGYGMQLSNSWGYPERAERIAELANGGKQDLRSTIAMQYDQTTTFAAKL KSMFQAPGMSKPLKQAIDALPEADRNKAREAFTRLMAFDGKLSATSADAALYELFLQESAKQIFLDELGPETSPAWQALV ANASSSYSPQADHLLGRDDSPYWDDVKTPQKEDKPAILARSLAAAITSGDSLLGSDHKAWQWGKLHRDNWASTSPLAKQL GGGEFNRGATPTGGDHTTLNVSGFEWGKGFDARMAPGLRMIVDFSLVEPMTGLISTGQSGNPASPYYANSIEPWQKGQYQ SIPVQQQNYEKGYGKQRLTLTPGK >Mature_823_residues ASPALRHFLPRFGAAAAAASFLSLAGCQLGGNDPETVLPVSGTFPLKGLAQNVSVRRNNMGMPLIESSSYHDALFTLGYV HAGDRISQMLGMRLLAQGRLSEMAGADALDVDRLMRSVNLKQNASDLYNAASPRLKRFFDVYARGVNAYLFRYRDKLPAD IASSGYKPEYWKPEDSALIFSLLNFSLSVNLQEELSALVLAQKVSADKLAWLLPTYPDEELPFAEADKLKGLNLNNQVTG LSDLNRIALQLSDLNMLGVAASSNWAIAPQRSRNGKSLLASDMQLPAGLNSAWSFVQIRAPKYQVSGVTIAGMPLVLSGF NGKLAWSMSNVKGDNQDLFLEKIKREGNRVSYMVDGKWLPAAAHQETFLVKGGSPLRETVYETRHGALLNASATPPGNGL SLALQVPNFKDDKSLDAFFDLSRAPNVEKAFDTSREIRAITLNMIFADASNIGWQVTGRFPNRREGQGLLPSPGWDGKYD WDGFADSMLHPYDQDPRQGWLAAANQRTIPKGYGMQLSNSWGYPERAERIAELANGGKQDLRSTIAMQYDQTTTFAAKLK SMFQAPGMSKPLKQAIDALPEADRNKAREAFTRLMAFDGKLSATSADAALYELFLQESAKQIFLDELGPETSPAWQALVA NASSSYSPQADHLLGRDDSPYWDDVKTPQKEDKPAILARSLAAAITSGDSLLGSDHKAWQWGKLHRDNWASTSPLAKQLG GGEFNRGATPTGGDHTTLNVSGFEWGKGFDARMAPGLRMIVDFSLVEPMTGLISTGQSGNPASPYYANSIEPWQKGQYQS IPVQQQNYEKGYGKQRLTLTPGK
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 90088; Mature: 89956
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPALRHFLPRFGAAAAAASFLSLAGCQLGGNDPETVLPVSGTFPLKGLAQNVSVRRNN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC MGMPLIESSSYHDALFTLGYVHAGDRISQMLGMRLLAQGRLSEMAGADALDVDRLMRSVN CCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC LKQNASDLYNAASPRLKRFFDVYARGVNAYLFRYRDKLPADIASSGYKPEYWKPEDSALI CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHH FSLLNFSLSVNLQEELSALVLAQKVSADKLAWLLPTYPDEELPFAEADKLKGLNLNNQVT HHHHHHHEEECHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCC GLSDLNRIALQLSDLNMLGVAASSNWAIAPQRSRNGKSLLASDMQLPAGLNSAWSFVQIR CHHHHHHHHEEEECCEEEEEEECCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEE APKYQVSGVTIAGMPLVLSGFNGKLAWSMSNVKGDNQDLFLEKIKREGNRVSYMVDGKWL CCCEEECCEEEECCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCC PAAAHQETFLVKGGSPLRETVYETRHGALLNASATPPGNGLSLALQVPNFKDDKSLDAFF CCCCCCCEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHH DLSRAPNVEKAFDTSREIRAITLNMIFADASNIGWQVTGRFPNRREGQGLLPSPGWDGKY HHCCCCCHHHHHCCCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC DWDGFADSMLHPYDQDPRQGWLAAANQRTIPKGYGMQLSNSWGYPERAERIAELANGGKQ CCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCHH DLRSTIAMQYDQTTTFAAKLKSMFQAPGMSKPLKQAIDALPEADRNKAREAFTRLMAFDG HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC KLSATSADAALYELFLQESAKQIFLDELGPETSPAWQALVANASSSYSPQADHLLGRDDS CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCC PYWDDVKTPQKEDKPAILARSLAAAITSGDSLLGSDHKAWQWGKLHRDNWASTSPLAKQL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH GGGEFNRGATPTGGDHTTLNVSGFEWGKGFDARMAPGLRMIVDFSLVEPMTGLISTGQSG CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCC NPASPYYANSIEPWQKGQYQSIPVQQQNYEKGYGKQRLTLTPGK CCCCCCCCCCCCHHHCCCCCCCCCCHHCHHHCCCCEEEEECCCC >Mature Secondary Structure ASPALRHFLPRFGAAAAAASFLSLAGCQLGGNDPETVLPVSGTFPLKGLAQNVSVRRNN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC MGMPLIESSSYHDALFTLGYVHAGDRISQMLGMRLLAQGRLSEMAGADALDVDRLMRSVN CCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC LKQNASDLYNAASPRLKRFFDVYARGVNAYLFRYRDKLPADIASSGYKPEYWKPEDSALI CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHH FSLLNFSLSVNLQEELSALVLAQKVSADKLAWLLPTYPDEELPFAEADKLKGLNLNNQVT HHHHHHHEEECHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCC GLSDLNRIALQLSDLNMLGVAASSNWAIAPQRSRNGKSLLASDMQLPAGLNSAWSFVQIR CHHHHHHHHEEEECCEEEEEEECCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEE APKYQVSGVTIAGMPLVLSGFNGKLAWSMSNVKGDNQDLFLEKIKREGNRVSYMVDGKWL CCCEEECCEEEECCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCC PAAAHQETFLVKGGSPLRETVYETRHGALLNASATPPGNGLSLALQVPNFKDDKSLDAFF CCCCCCCEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHH DLSRAPNVEKAFDTSREIRAITLNMIFADASNIGWQVTGRFPNRREGQGLLPSPGWDGKY HHCCCCCHHHHHCCCCCEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC DWDGFADSMLHPYDQDPRQGWLAAANQRTIPKGYGMQLSNSWGYPERAERIAELANGGKQ CCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCHH DLRSTIAMQYDQTTTFAAKLKSMFQAPGMSKPLKQAIDALPEADRNKAREAFTRLMAFDG HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC KLSATSADAALYELFLQESAKQIFLDELGPETSPAWQALVANASSSYSPQADHLLGRDDS CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCC PYWDDVKTPQKEDKPAILARSLAAAITSGDSLLGSDHKAWQWGKLHRDNWASTSPLAKQL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH GGGEFNRGATPTGGDHTTLNVSGFEWGKGFDARMAPGLRMIVDFSLVEPMTGLISTGQSG CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCC NPASPYYANSIEPWQKGQYQSIPVQQQNYEKGYGKQRLTLTPGK CCCCCCCCCCCCHHHCCCCCCCCCCHHCHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA