Click here to switch to the map view.

The map label for this gene is 66047077

Identifier: 66047077

GI number: 66047077

Start: 4588981

End: 4589661

Strand: Direct

Name: 66047077

Synonym: Psyr_3850

Alternate gene names: NA

Gene position: 4588981-4589661 (Clockwise)

Preceding gene: 66047076

Following gene: 66047078

Centisome position: 75.31

GC content: 61.97

Gene sequence:

>681_bases
ATGTTTGCTGCCCGTTCCGTCCTCGTATTTGCTCTTCTACCGCTGTTTGCCGGGTGTCAGTTGCTCGGTAAACAGAACGA
GGAACCGAAGGTTTCCACGGCGGGCATGCTCCGCATGCAGGGCGATCTGACCGGGGAGAACGGCCAGTTGCTGTTCAAGC
CGTGTAACGAGCAGCGTCGCTACGTGGTCAAGGATCGCGGCAACACCGGCATTCTGCAGGAGGCGGCCTCGCTGGCGGAC
AGCAAGGGCACGGTGTTTGCCGATCTGCGCGGCAGCTTTGCCGCGAGCAAGGCGGCCAACAGTGACGGTCAGCTGGACCT
GCATCAGCTGTACCGCGTCGAACGTCCAGGCCAGGCCTGTGAAGACCTCAACTTCAAACGCCTGACATTGCACGTCAATG
GCAACAAACCCGCCTGGAACGTCAATGTCAGCGGCAAGGGCATGGTTCTGGAGCGCGAGGGCGTCGCGCCACTGGCGTTG
CCCTACGTGGAAGAGAAGCTGCCGGACGGCAGTTTCAGCGTCAGCAGCGAAGCCAACAACCAGCGTATCGAGATATGGGT
CGCACCACAGCGCTGCGTCGACAGCGTCGACGGCTCGGTGCAACACCTCACCGCAGAGCTGCGCATCAACGGCCAGGCCC
AGCGTGGCTGCGGTTATTACGGCGGTTCACGCGACGACTGA

Upstream 100 bases:

>100_bases
GCACGATAGTCAAAGCCACTGCTCGCGCGATAAGCATCCCGCCCCTTGTGATGCACCTCCAGTCTGAGTAACGTGGCGGC
ACCTGTCTGGAGACCACATC

Downstream 100 bases:

>100_bases
TCGCCCAGGCTCGCCGCCAAAGGGGTTCAGCGCTTATAATCGCCGGTTCTTGTAGTGCTGTCGGGCTGAACCTGCGGCCC
GAAAACTGGACCCCTTAATG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MFAARSVLVFALLPLFAGCQLLGKQNEEPKVSTAGMLRMQGDLTGENGQLLFKPCNEQRRYVVKDRGNTGILQEAASLAD
SKGTVFADLRGSFAASKAANSDGQLDLHQLYRVERPGQACEDLNFKRLTLHVNGNKPAWNVNVSGKGMVLEREGVAPLAL
PYVEEKLPDGSFSVSSEANNQRIEIWVAPQRCVDSVDGSVQHLTAELRINGQAQRGCGYYGGSRDD

Sequences:

>Translated_226_residues
MFAARSVLVFALLPLFAGCQLLGKQNEEPKVSTAGMLRMQGDLTGENGQLLFKPCNEQRRYVVKDRGNTGILQEAASLAD
SKGTVFADLRGSFAASKAANSDGQLDLHQLYRVERPGQACEDLNFKRLTLHVNGNKPAWNVNVSGKGMVLEREGVAPLAL
PYVEEKLPDGSFSVSSEANNQRIEIWVAPQRCVDSVDGSVQHLTAELRINGQAQRGCGYYGGSRDD
>Mature_226_residues
MFAARSVLVFALLPLFAGCQLLGKQNEEPKVSTAGMLRMQGDLTGENGQLLFKPCNEQRRYVVKDRGNTGILQEAASLAD
SKGTVFADLRGSFAASKAANSDGQLDLHQLYRVERPGQACEDLNFKRLTLHVNGNKPAWNVNVSGKGMVLEREGVAPLAL
PYVEEKLPDGSFSVSSEANNQRIEIWVAPQRCVDSVDGSVQHLTAELRINGQAQRGCGYYGGSRDD

Specific function: Unknown

COG id: COG3650

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24584; Mature: 24584

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAARSVLVFALLPLFAGCQLLGKQNEEPKVSTAGMLRMQGDLTGENGQLLFKPCNEQRR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCE
YVVKDRGNTGILQEAASLADSKGTVFADLRGSFAASKAANSDGQLDLHQLYRVERPGQAC
EEEEECCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCCEEHHHHHHCCCCCCHH
EDLNFKRLTLHVNGNKPAWNVNVSGKGMVLEREGVAPLALPYVEEKLPDGSFSVSSEANN
HCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCCCEECHHHHHHCCCCCEEECCCCCC
QRIEIWVAPQRCVDSVDGSVQHLTAELRINGQAQRGCGYYGGSRDD
CEEEEEECCHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFAARSVLVFALLPLFAGCQLLGKQNEEPKVSTAGMLRMQGDLTGENGQLLFKPCNEQRR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCE
YVVKDRGNTGILQEAASLADSKGTVFADLRGSFAASKAANSDGQLDLHQLYRVERPGQAC
EEEEECCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCCEEHHHHHHCCCCCCHH
EDLNFKRLTLHVNGNKPAWNVNVSGKGMVLEREGVAPLALPYVEEKLPDGSFSVSSEANN
HCCCEEEEEEEECCCCCEEEEEECCCEEEEECCCCCCEECHHHHHHCCCCCEEECCCCCC
QRIEIWVAPQRCVDSVDGSVQHLTAELRINGQAQRGCGYYGGSRDD
CEEEEEECCHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA