| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66047036
Identifier: 66047036
GI number: 66047036
Start: 4529113
End: 4529592
Strand: Direct
Name: 66047036
Synonym: Psyr_3808
Alternate gene names: NA
Gene position: 4529113-4529592 (Clockwise)
Preceding gene: 66047035
Following gene: 66047037
Centisome position: 74.32
GC content: 41.67
Gene sequence:
>480_bases ATGAGCTCAACTTCAGACGTATCTATCGCACATATATCTCGAGCAAGTAACAAATACAACAACGCCGGAATTGCAGCGAT CGCAATCTCAAGCGTGCTTAACCACACCAAGACTTTGTCGCTGAGTAAAGCGCTGCTCGTTATGCCTATCGTGATGCACA GCGAAACAACAAAGTTTCTTGCAAGCGAAAAAACAAGATCACGAACAATTGCCACTTTAATAGCTATCCGCCCAGACTTT GTATCAAATTTTAACCAACGCTTTCACTCCAGCCTTATTCACTCTATTAATGCTATTCAACTGCTCCACACGCTAGGACA CATCGAGTTTAACTCAATCCTCAAGCAAAATAATACAATTGAATACACTAAAGATTTCGGCACACGAGCCGCACTTATAC AAAAAGCCTCTTCTGATATAGCAAACTTACTTCACTCCTCGGAAGAGGAGCTTTACCTCAATCTAAGGATAGAACTGTGA
Upstream 100 bases:
>100_bases GGCTTGGCGAGGATGAGCTAAATACTGAACATTCTAATGGTGAGCTCTATTTGTTGTCTGACGAAAATACGATCGGATGG CATAGGGACTGGAAGATTTT
Downstream 100 bases:
>100_bases GATTCGGAATAGATACTATACGCTTGTGGTCACATAAAGGTGAAACACGAGATATAATTTTTGAACGCGATAAAATCAAC GTATTAAGTGGCCATAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSSTSDVSIAHISRASNKYNNAGIAAIAISSVLNHTKTLSLSKALLVMPIVMHSETTKFLASEKTRSRTIATLIAIRPDF VSNFNQRFHSSLIHSINAIQLLHTLGHIEFNSILKQNNTIEYTKDFGTRAALIQKASSDIANLLHSSEEELYLNLRIEL
Sequences:
>Translated_159_residues MSSTSDVSIAHISRASNKYNNAGIAAIAISSVLNHTKTLSLSKALLVMPIVMHSETTKFLASEKTRSRTIATLIAIRPDF VSNFNQRFHSSLIHSINAIQLLHTLGHIEFNSILKQNNTIEYTKDFGTRAALIQKASSDIANLLHSSEEELYLNLRIEL >Mature_158_residues SSTSDVSIAHISRASNKYNNAGIAAIAISSVLNHTKTLSLSKALLVMPIVMHSETTKFLASEKTRSRTIATLIAIRPDFV SNFNQRFHSSLIHSINAIQLLHTLGHIEFNSILKQNNTIEYTKDFGTRAALIQKASSDIANLLHSSEEELYLNLRIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17618; Mature: 17487
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTSDVSIAHISRASNKYNNAGIAAIAISSVLNHTKTLSLSKALLVMPIVMHSETTKFL CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ASEKTRSRTIATLIAIRPDFVSNFNQRFHSSLIHSINAIQLLHTLGHIEFNSILKQNNTI HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCE EYTKDFGTRAALIQKASSDIANLLHSSEEELYLNLRIEL EEHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC >Mature Secondary Structure SSTSDVSIAHISRASNKYNNAGIAAIAISSVLNHTKTLSLSKALLVMPIVMHSETTKFL CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ASEKTRSRTIATLIAIRPDFVSNFNQRFHSSLIHSINAIQLLHTLGHIEFNSILKQNNTI HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCE EYTKDFGTRAALIQKASSDIANLLHSSEEELYLNLRIEL EEHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA