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The map label for this gene is 66047017

Identifier: 66047017

GI number: 66047017

Start: 4504850

End: 4505713

Strand: Direct

Name: 66047017

Synonym: Psyr_3789

Alternate gene names: NA

Gene position: 4504850-4505713 (Clockwise)

Preceding gene: 66047016

Following gene: 66047022

Centisome position: 73.93

GC content: 59.14

Gene sequence:

>864_bases
ATGCAGTCTTTATTCAAAGCATTCGTCACACTGTTGATGACCGTTGCACTGCTCGCAGGATGCAATCAGGTAGGACTGGC
GTACCGCAACCTCGACGTGATCATTCCGTGGACGCTCAGCGACTACCTGGACATGAATTCGGAACAGAAAGGCTGGCTGG
ACGTGCGCCTCAAGCAACACTTGAGCTGGCACTGCAGCACCCAGCTGCCGGAGTACCTGACCTGGCTGGACAAGCTCGAG
GACATGGTCAAGACCGATCAGGTGACCTACGAAGGGCTGCAGGCTCGTACCAGCGAAGCCAAAGAAGCAATCGCCAAGAT
CTCGAAGGAAATCACGCCCTCTGCGGTAGAGTTGCTGTCGCGCTTTGACGACAAGCAGGTGCAGGAGATGCAGGAGTCGT
TCGCCAAGGATCAGCGCAAGCGCGAGAACAAATACCTCGACCAGCCACTGGAACGTCAGATCGCAGAGCGCGCCGACCGT
ATGCAGAAACGTGTGACGCCGTGGGTCGGCAAGCTCAATCAGGCGCAGAAAGACCGCATTCAGGCCTGGTCTGCATCGCT
CGGCGAACAGAACAAGGCGTGGATCGAGAACCGTACGCGGTGGCAGAACCTGTTTCTGGCCACGGTCCAGCAGCGTCAGG
CCAGCGACTTCCCGCAACGCATCGCCGCGTTGCTGCAGGACCGCGAGACGTTCTGGACCCCTGAATACCGCAAGGCCTAC
GACCAGACCGAGAAGGCCGCGATATCGCTGATCGTCGACATCACCGCCCTGAGCACCCCGGAACAACGCGCCAAACTGCT
GAGCCGCATCGCCGACATGCGCAAGGACTTCACCGACCTGGACTGCCTGAAGTCGCAGAAGTAG

Upstream 100 bases:

>100_bases
CACCCTTAAAGCGGTGCGTTCATTCTTTTAAAGGCCCAAACCGGTTGAACTGCCAGACGCTACACTCCTCTACTGCACGT
CAGTACGCCAAGGAGATGTC

Downstream 100 bases:

>100_bases
TTCGATAGCCCTCTCACCACAACTATCGTACCCATGCTGCGCATGGGTATGCCGTTCTGGACGCTCTGCTTCCTGCCTTG
AGTACGCGGGCGCGGCGCAG

Product: putative lipoprotein

Products: NA

Alternate protein names: DNA Polymerase III Alpha Subunit; Rare Lipoprotein A

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQSLFKAFVTLLMTVALLAGCNQVGLAYRNLDVIIPWTLSDYLDMNSEQKGWLDVRLKQHLSWHCSTQLPEYLTWLDKLE
DMVKTDQVTYEGLQARTSEAKEAIAKISKEITPSAVELLSRFDDKQVQEMQESFAKDQRKRENKYLDQPLERQIAERADR
MQKRVTPWVGKLNQAQKDRIQAWSASLGEQNKAWIENRTRWQNLFLATVQQRQASDFPQRIAALLQDRETFWTPEYRKAY
DQTEKAAISLIVDITALSTPEQRAKLLSRIADMRKDFTDLDCLKSQK

Sequences:

>Translated_287_residues
MQSLFKAFVTLLMTVALLAGCNQVGLAYRNLDVIIPWTLSDYLDMNSEQKGWLDVRLKQHLSWHCSTQLPEYLTWLDKLE
DMVKTDQVTYEGLQARTSEAKEAIAKISKEITPSAVELLSRFDDKQVQEMQESFAKDQRKRENKYLDQPLERQIAERADR
MQKRVTPWVGKLNQAQKDRIQAWSASLGEQNKAWIENRTRWQNLFLATVQQRQASDFPQRIAALLQDRETFWTPEYRKAY
DQTEKAAISLIVDITALSTPEQRAKLLSRIADMRKDFTDLDCLKSQK
>Mature_287_residues
MQSLFKAFVTLLMTVALLAGCNQVGLAYRNLDVIIPWTLSDYLDMNSEQKGWLDVRLKQHLSWHCSTQLPEYLTWLDKLE
DMVKTDQVTYEGLQARTSEAKEAIAKISKEITPSAVELLSRFDDKQVQEMQESFAKDQRKRENKYLDQPLERQIAERADR
MQKRVTPWVGKLNQAQKDRIQAWSASLGEQNKAWIENRTRWQNLFLATVQQRQASDFPQRIAALLQDRETFWTPEYRKAY
DQTEKAAISLIVDITALSTPEQRAKLLSRIADMRKDFTDLDCLKSQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33464; Mature: 33464

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLFKAFVTLLMTVALLAGCNQVGLAYRNLDVIIPWTLSDYLDMNSEQKGWLDVRLKQH
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCHHHHHCCCCCCCCHHHHHHHHH
LSWHCSTQLPEYLTWLDKLEDMVKTDQVTYEGLQARTSEAKEAIAKISKEITPSAVELLS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RFDDKQVQEMQESFAKDQRKRENKYLDQPLERQIAERADRMQKRVTPWVGKLNQAQKDRI
HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAWSASLGEQNKAWIENRTRWQNLFLATVQQRQASDFPQRIAALLQDRETFWTPEYRKAY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
DQTEKAAISLIVDITALSTPEQRAKLLSRIADMRKDFTDLDCLKSQK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA