Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is ywbO [H]

Identifier: 66047013

GI number: 66047013

Start: 4501194

End: 4501826

Strand: Direct

Name: ywbO [H]

Synonym: Psyr_3785

Alternate gene names: 66047013

Gene position: 4501194-4501826 (Clockwise)

Preceding gene: 66047011

Following gene: 66047015

Centisome position: 73.87

GC content: 58.61

Gene sequence:

>633_bases
ATGAACACTGTTGGTCCCCTGAAAATAGATGTCTGGAGCGACTACGTCTGCCCGTTCTGCTACCTGCAACTGGCCGTCCT
GGAACAGCTTCAGCAAACCTACGGTGAGCGGCTCGAATTTAACTGGCATGCCTTTGAACTGCGCCCTGACCCATTGGCAC
TGCTCGACCCGAGTGCTGATTATCTGCGTGAAACCTGGTCACGATCTGTACTGCCGATGGCCGACAGGCGTCAGGTGATG
ATGAAGATGCCCAGCGTTCAGCCGCGCAGCCGCAAGGTTCTGGAAGCCGCAGTCTTTGCCAGGAATGCAGGAGGTTTTGA
AGCGTTTCACAAAGAGGCTTACCGGGCGTTCTTCGAAAAGGGGCTGGATATCAGCGAGACGCACACGCTGCTCGAGCTGG
CCACCACCACCGGACTGGATCGGCAAGCGATGGAGCAGGCACTCAATGCCGGTCATTTTGAAAAGGCCGTGTTGGACGAC
CGGCAACTGGCACAGAAGCTTGGGTTGAGAGCGGTGCCGGTCGTGCTGCTGCGACGCAGCGACGAGGCGCTGGAAGACGC
GCGGGTATTCAACGGCACCTTGCCGTTTGAGCGCCTGAGCCAGGAAATAGACGCGCTCGCCACTTGGGCCTGA

Upstream 100 bases:

>100_bases
GGGTATGACCGACCAAAGGTAGACATTGATCCATCCAACTTCAGGACTTTTAAAAGGTGAAGGGAGTCAGTGTTAACGAG
CGTTATGGAGTTTCAAGCAC

Downstream 100 bases:

>100_bases
GGCATCGCGAGCTGCATTGACTGCAGCTCACATCAATTGCCGCTCAGGCACCCAGGCTGCGACGTGTTGTCAGACCAGCT
CGATACGGTCGGCGTGAATC

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSADYLRETWSRSVLPMADRRQVM
MKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEKGLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDD
RQLAQKLGLRAVPVVLLRRSDEALEDARVFNGTLPFERLSQEIDALATWA

Sequences:

>Translated_210_residues
MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSADYLRETWSRSVLPMADRRQVM
MKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEKGLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDD
RQLAQKLGLRAVPVVLLRRSDEALEDARVFNGTLPFERLSQEIDALATWA
>Mature_210_residues
MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSADYLRETWSRSVLPMADRRQVM
MKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEKGLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDD
RQLAQKLGLRAVPVVLLRRSDEALEDARVFNGTLPFERLSQEIDALATWA

Specific function: Unknown

COG id: COG2761

COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 23958; Mature: 23958

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSAD
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCEEECCCHH
YLRETWSRSVLPMADRRQVMMKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEK
HHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDDRQLAQKLGLRAVPVVLLRRS
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC
DEALEDARVFNGTLPFERLSQEIDALATWA
CHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSAD
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCEEECCCHH
YLRETWSRSVLPMADRRQVMMKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEK
HHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDDRQLAQKLGLRAVPVVLLRRS
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC
DEALEDARVFNGTLPFERLSQEIDALATWA
CHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]