| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ywbO [H]
Identifier: 66047013
GI number: 66047013
Start: 4501194
End: 4501826
Strand: Direct
Name: ywbO [H]
Synonym: Psyr_3785
Alternate gene names: 66047013
Gene position: 4501194-4501826 (Clockwise)
Preceding gene: 66047011
Following gene: 66047015
Centisome position: 73.87
GC content: 58.61
Gene sequence:
>633_bases ATGAACACTGTTGGTCCCCTGAAAATAGATGTCTGGAGCGACTACGTCTGCCCGTTCTGCTACCTGCAACTGGCCGTCCT GGAACAGCTTCAGCAAACCTACGGTGAGCGGCTCGAATTTAACTGGCATGCCTTTGAACTGCGCCCTGACCCATTGGCAC TGCTCGACCCGAGTGCTGATTATCTGCGTGAAACCTGGTCACGATCTGTACTGCCGATGGCCGACAGGCGTCAGGTGATG ATGAAGATGCCCAGCGTTCAGCCGCGCAGCCGCAAGGTTCTGGAAGCCGCAGTCTTTGCCAGGAATGCAGGAGGTTTTGA AGCGTTTCACAAAGAGGCTTACCGGGCGTTCTTCGAAAAGGGGCTGGATATCAGCGAGACGCACACGCTGCTCGAGCTGG CCACCACCACCGGACTGGATCGGCAAGCGATGGAGCAGGCACTCAATGCCGGTCATTTTGAAAAGGCCGTGTTGGACGAC CGGCAACTGGCACAGAAGCTTGGGTTGAGAGCGGTGCCGGTCGTGCTGCTGCGACGCAGCGACGAGGCGCTGGAAGACGC GCGGGTATTCAACGGCACCTTGCCGTTTGAGCGCCTGAGCCAGGAAATAGACGCGCTCGCCACTTGGGCCTGA
Upstream 100 bases:
>100_bases GGGTATGACCGACCAAAGGTAGACATTGATCCATCCAACTTCAGGACTTTTAAAAGGTGAAGGGAGTCAGTGTTAACGAG CGTTATGGAGTTTCAAGCAC
Downstream 100 bases:
>100_bases GGCATCGCGAGCTGCATTGACTGCAGCTCACATCAATTGCCGCTCAGGCACCCAGGCTGCGACGTGTTGTCAGACCAGCT CGATACGGTCGGCGTGAATC
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSADYLRETWSRSVLPMADRRQVM MKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEKGLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDD RQLAQKLGLRAVPVVLLRRSDEALEDARVFNGTLPFERLSQEIDALATWA
Sequences:
>Translated_210_residues MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSADYLRETWSRSVLPMADRRQVM MKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEKGLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDD RQLAQKLGLRAVPVVLLRRSDEALEDARVFNGTLPFERLSQEIDALATWA >Mature_210_residues MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSADYLRETWSRSVLPMADRRQVM MKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEKGLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDD RQLAQKLGLRAVPVVLLRRSDEALEDARVFNGTLPFERLSQEIDALATWA
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23958; Mature: 23958
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSAD CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCEEECCCHH YLRETWSRSVLPMADRRQVMMKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEK HHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDDRQLAQKLGLRAVPVVLLRRS CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC DEALEDARVFNGTLPFERLSQEIDALATWA CHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNTVGPLKIDVWSDYVCPFCYLQLAVLEQLQQTYGERLEFNWHAFELRPDPLALLDPSAD CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCEEECCCHH YLRETWSRSVLPMADRRQVMMKMPSVQPRSRKVLEAAVFARNAGGFEAFHKEAYRAFFEK HHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GLDISETHTLLELATTTGLDRQAMEQALNAGHFEKAVLDDRQLAQKLGLRAVPVVLLRRS CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC DEALEDARVFNGTLPFERLSQEIDALATWA CHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]