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The map label for this gene is slyA [H]

Identifier: 66046965

GI number: 66046965

Start: 4451490

End: 4451924

Strand: Reverse

Name: slyA [H]

Synonym: Psyr_3737

Alternate gene names: 66046965

Gene position: 4451924-4451490 (Counterclockwise)

Preceding gene: 66046966

Following gene: 66046964

Centisome position: 73.06

GC content: 58.62

Gene sequence:

>435_bases
ATGCCAATGACTGATGAACATCGTTTCGGGATGCAGCTCGGACACCTCACGCGAGGCTGGCGTGCCGAGCTGGATCGTCG
GCTGGCCGATCTTGGCCTGTCCCAGGCCCGCTGGCTGGTTTTGCTGCACCTCGCGCGCTTTACCGAACCGCCCACCCAGC
GCGAGCTGGCTCAAAGCGTTGGCGTAGAAGGCCCCACCCTGGCGCGTTTGCTCGACAGTCTTGAAAAACAGGGCCTGGTG
CAGCGTCAGGCAGTGCTCGAAGATCGCCGTGCGAAAAAGATCCTGCTCAGTGACACGGCATTGCCCCTGATCGAAAAAAT
TGAAAACATCGCCAATGTATTGCGTATCGAGTTGTTCGAGGGCGTGAGCGAGGAGGATTTGCGCGTCAGCATGCGCGTGC
ATTCGCAGATTCTGGCCAATCTGGAAAGATCCTGA

Upstream 100 bases:

>100_bases
GGTATAACGGCGTGCGACGGAGCGTCACCGTCCCGTGCTTGCCTGAACATAAGGACCATGCTTAGCTCGCTAATAATTAG
TTTGAATCACGAGTTTCCTT

Downstream 100 bases:

>100_bases
GACGAAGCTGCGCATTCTCAACCATAATCGTTAAACGGATACTGACGTCCATCTGATTACGTGAGAAGCCTGCCGTGGTT
TCCATAAGGGTTCGCATGCT

Product: regulatory protein, MarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MPMTDEHRFGMQLGHLTRGWRAELDRRLADLGLSQARWLVLLHLARFTEPPTQRELAQSVGVEGPTLARLLDSLEKQGLV
QRQAVLEDRRAKKILLSDTALPLIEKIENIANVLRIELFEGVSEEDLRVSMRVHSQILANLERS

Sequences:

>Translated_144_residues
MPMTDEHRFGMQLGHLTRGWRAELDRRLADLGLSQARWLVLLHLARFTEPPTQRELAQSVGVEGPTLARLLDSLEKQGLV
QRQAVLEDRRAKKILLSDTALPLIEKIENIANVLRIELFEGVSEEDLRVSMRVHSQILANLERS
>Mature_143_residues
PMTDEHRFGMQLGHLTRGWRAELDRRLADLGLSQARWLVLLHLARFTEPPTQRELAQSVGVEGPTLARLLDSLEKQGLVQ
RQAVLEDRRAKKILLSDTALPLIEKIENIANVLRIELFEGVSEEDLRVSMRVHSQILANLERS

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=122, Percent_Identity=41.8032786885246, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16438; Mature: 16307

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMTDEHRFGMQLGHLTRGWRAELDRRLADLGLSQARWLVLLHLARFTEPPTQRELAQSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GVEGPTLARLLDSLEKQGLVQRQAVLEDRRAKKILLSDTALPLIEKIENIANVLRIELFE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVSEEDLRVSMRVHSQILANLERS
CCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PMTDEHRFGMQLGHLTRGWRAELDRRLADLGLSQARWLVLLHLARFTEPPTQRELAQSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GVEGPTLARLLDSLEKQGLVQRQAVLEDRRAKKILLSDTALPLIEKIENIANVLRIELFE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVSEEDLRVSMRVHSQILANLERS
CCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA