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The map label for this gene is 66046863

Identifier: 66046863

GI number: 66046863

Start: 4315774

End: 4316343

Strand: Direct

Name: 66046863

Synonym: Psyr_3634

Alternate gene names: NA

Gene position: 4315774-4316343 (Clockwise)

Preceding gene: 66046861

Following gene: 66046878

Centisome position: 70.82

GC content: 54.04

Gene sequence:

>570_bases
ATGCGTTACGCGCTTGATCATAAGGCCCAAACGCACCAACGCATTGTCAAGGAAGCGTCCATGCGCTTCCGTCGTGACGG
CATTGGTGCTACGGGCTTGCAACCTTTGATGAAGGCACTTGGCTTGACCCATGGCGGGTTCTACGCGCATTTCAAATCCA
AGGATGATCTTGTTGAACAGGCATTGAGTCACGCCTTCGACAATGTAAAAGGAATCACCAGCGACGTGTTCGCCAGACAG
GACTCGCTTAGTGAATTCATTGATCTCTACCTATCGATAGCCAGCCGCGATGCGGAAGACGGCGGGTGTCCATTACCGAC
TATGTGCCTGGAACTGGGCCAGCGAGATCAGCCCAGCATGACGACGGATAAAATCATCCTTCACCTGCTGGAGAAGTTCG
ACAAGCCCCTGGCGGAGAATGGACTGGAGTCCAAAAGCCTGCCGGTGCTGTCCGCACTGGTAGGTGGTCTGGCACTCGCA
CGCGGCGCTTTTGACGAGGAGCTGTCACAGCGCATTCTGGACACGACCCGCGAATATCTCAAAAAGGAGATAAAAAAGAG
CACCAACTGA

Upstream 100 bases:

>100_bases
ATTGAGCTTAAGTTCTCATTGCGAGCGAAAGCCTGCTGCATCGTTTCACCTATCCATGTATAAATGCGCTTACACATTGG
CCCTCTCGGAGACTCAGCGC

Downstream 100 bases:

>100_bases
CCCTCTGGAACAGATACTTTCCCGGGAAGCTTCCCGGCGAGAGTTTATAAACACACAGGCCGATCATTGATCGGCCTGTG
TGTTTAACGGATGAAACGCT

Product: regulatory protein, TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Tetr Family; TetR Family Regulator; Transcription Regulator Protein; TetR Family Transcription Regulatory Protein; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Orf_Bo

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRYALDHKAQTHQRIVKEASMRFRRDGIGATGLQPLMKALGLTHGGFYAHFKSKDDLVEQALSHAFDNVKGITSDVFARQ
DSLSEFIDLYLSIASRDAEDGGCPLPTMCLELGQRDQPSMTTDKIILHLLEKFDKPLAENGLESKSLPVLSALVGGLALA
RGAFDEELSQRILDTTREYLKKEIKKSTN

Sequences:

>Translated_189_residues
MRYALDHKAQTHQRIVKEASMRFRRDGIGATGLQPLMKALGLTHGGFYAHFKSKDDLVEQALSHAFDNVKGITSDVFARQ
DSLSEFIDLYLSIASRDAEDGGCPLPTMCLELGQRDQPSMTTDKIILHLLEKFDKPLAENGLESKSLPVLSALVGGLALA
RGAFDEELSQRILDTTREYLKKEIKKSTN
>Mature_189_residues
MRYALDHKAQTHQRIVKEASMRFRRDGIGATGLQPLMKALGLTHGGFYAHFKSKDDLVEQALSHAFDNVKGITSDVFARQ
DSLSEFIDLYLSIASRDAEDGGCPLPTMCLELGQRDQPSMTTDKIILHLLEKFDKPLAENGLESKSLPVLSALVGGLALA
RGAFDEELSQRILDTTREYLKKEIKKSTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20993; Mature: 20993

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYALDHKAQTHQRIVKEASMRFRRDGIGATGLQPLMKALGLTHGGFYAHFKSKDDLVEQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHH
ALSHAFDNVKGITSDVFARQDSLSEFIDLYLSIASRDAEDGGCPLPTMCLELGQRDQPSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCH
TTDKIILHLLEKFDKPLAENGLESKSLPVLSALVGGLALARGAFDEELSQRILDTTREYL
HHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KKEIKKSTN
HHHHHHCCC
>Mature Secondary Structure
MRYALDHKAQTHQRIVKEASMRFRRDGIGATGLQPLMKALGLTHGGFYAHFKSKDDLVEQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHCCCHHHHHHH
ALSHAFDNVKGITSDVFARQDSLSEFIDLYLSIASRDAEDGGCPLPTMCLELGQRDQPSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCH
TTDKIILHLLEKFDKPLAENGLESKSLPVLSALVGGLALARGAFDEELSQRILDTTREYL
HHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KKEIKKSTN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA